RNA–Protein interactions for RNA: YOL027C

MDM38, Transcript of Mitochondrial protein, yeast

Gene MDM38, Length 1,722 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDM38	YOL027C	VPS30	Q02948	557 aa		5.22	□□□□□ -1.57
MDM38	YOL027C	PHM6	Q05637	104 aa		5.22	□□□□□ -1.57
MDM38	YOL027C	CDA1	Q06702	301 aa		5.22	□□□□□ -1.57
MDM38	YOL027C	HAL9	Q12180	1030 aa		5.22	□□□□□ -1.57
MDM38	YOL027C	YOR022C	Q12204	715 aa		5.22	□□□□□ -1.57
MDM38	YOL027C	PRC1	P00729	532 aa		5.21	□□□□□ -1.58
MDM38	YOL027C	PGI1	P12709	554 aa	Known RBP	5.21	□□□□□ -1.58
MDM38	YOL027C	KIN2	P13186	1147 aa	Known RBP	5.21	□□□□□ -1.58
MDM38	YOL027C	TRX2	P22803	104 aa	Known RBP	5.21	□□□□□ -1.58
MDM38	YOL027C	APL1	P27351	700 aa		5.21	□□□□□ -1.58
MDM38	YOL027C	RPD3	P32561	433 aa		5.21	□□□□□ -1.58
MDM38	YOL027C	NIC96	P34077	839 aa		5.21	□□□□□ -1.58
MDM38	YOL027C	RRP8	P38961	392 aa	Known RBP	5.21	□□□□□ -1.58
MDM38	YOL027C	RSC8	P43609	557 aa	Known RBP	5.21	□□□□□ -1.58
MDM38	YOL027C	CRR1	Q05790	422 aa		5.21	□□□□□ -1.58
MDM38	YOL027C	RPN7	Q06103	429 aa	Known RBP	5.21	□□□□□ -1.58
MDM38	YOL027C	HFI1	Q12060	488 aa		5.21	□□□□□ -1.58
MDM38	YOL027C	YLR149C	Q99296	730 aa		5.21	□□□□□ -1.58
MDM38	YOL027C	RPS21A	P0C0V8	87 aa	Known RBP	5.2	□□□□□ -1.58
MDM38	YOL027C	HSF1	P10961	833 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	MSB1	P21339	1137 aa	Known RBP	5.2	□□□□□ -1.58
MDM38	YOL027C	YKR018C	P36114	725 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	YGR021W	P53212	290 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	SKY1	Q03656	742 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	ECM16	Q04217	1267 aa	Known RBP	5.2	□□□□□ -1.58
MDM38	YOL027C	DCS2	Q12123	353 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	Q0142	Q9ZZW4	58 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	FBP1	P09201	348 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	DPB3	P27344	201 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	PTP2	P29461	750 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	OAF3	P36023	863 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
MDM38	YOL027C	YFL052W	P43551	465 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	ZIP2	P53061	704 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	YGR012W	P53206	393 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	NSG2	P53898	299 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	SSY1	Q03770	852 aa		5.2	□□□□□ -1.58
MDM38	YOL027C	RPS21B	Q3E754	87 aa	Known RBP	5.2	□□□□□ -1.58
MDM38	YOL027C	COX11	P19516	300 aa	Known RBP	5.19	□□□□□ -1.58
MDM38	YOL027C	SER1	P33330	395 aa	Known RBP	5.19	□□□□□ -1.58
MDM38	YOL027C	MNN4	P36044	1178 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	EMP65	P40085	556 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	SPC105	P53148	917 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	PUS2	P53167	370 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	DUS1	P53759	423 aa	Known RBP	5.19	□□□□□ -1.58
MDM38	YOL027C	RSM24	Q03976	319 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	YHM2	Q04013	314 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	SSL1	Q04673	461 aa	Predicted RBP	5.19	□□□□□ -1.58
MDM38	YOL027C	MLC2	Q06580	163 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	YDL121C	Q07541	149 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	YPR027C	Q12079	277 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	RRP6	Q12149	733 aa	Known RBP	5.19	□□□□□ -1.58
MDM38	YOL027C	PHM7	Q12252	991 aa		5.19	□□□□□ -1.58
MDM38	YOL027C	CHS2	P14180	963 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	KCC4	P25389	1037 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	FLR1	P38124	548 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	YIL108W	P40483	696 aa	Known RBP	5.18	□□□□□ -1.58
MDM38	YOL027C	PCL10	P53124	433 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	SLD3	P53135	668 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	PTA1	Q01329	785 aa	Predicted RBP	5.18	□□□□□ -1.58
MDM38	YOL027C	YMR187C	Q03236	431 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	PEX15	Q08215	383 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	YLR122C	Q12312	125 aa		5.18	□□□□□ -1.58
MDM38	YOL027C	COQ2	P32378	372 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	YKL133C	P36066	463 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	TAT1	P38085	619 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	MAL31	P38156	614 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	NSI1	Q12457	570 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	ZRG8	P40021	1076 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	YJR039W	P47107	1121 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	ARP4	P80428	489 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	YPL277C	Q08989	487 aa		5.17	□□□□□ -1.58
MDM38	YOL027C	LPX1	Q12405	387 aa	Known RBP	5.17	□□□□□ -1.58
MDM38	YOL027C	GCD1	P09032	578 aa	Predicted RBP	5.16	□□□□□ -1.58
MDM38	YOL027C	ADP1	P25371	1049 aa		5.16	□□□□□ -1.58
MDM38	YOL027C	POA1	P38218	177 aa		5.16	□□□□□ -1.58
MDM38	YOL027C	FAT1	P38225	669 aa		5.16	□□□□□ -1.58
MDM38	YOL027C	RIM4	P38741	713 aa		5.16	□□□□□ -1.58
MDM38	YOL027C	SSZ1	P38788	538 aa	Known RBP	5.16	□□□□□ -1.58
MDM38	YOL027C	SVL3	Q03088	825 aa	Known RBP	5.16	□□□□□ -1.58
MDM38	YOL027C	ECM38	Q05902	660 aa	Predicted RBP	5.16	□□□□□ -1.58
MDM38	YOL027C	SWI6	P09959	803 aa		5.15	□□□□□ -1.58
MDM38	YOL027C	SEC65	P29478	273 aa		5.15	□□□□□ -1.58
MDM38	YOL027C	CTF8	P38877	133 aa		5.15	□□□□□ -1.58
MDM38	YOL027C	NKP1	Q12493	238 aa		5.15	□□□□□ -1.58
MDM38	YOL027C	YPR053C	Q6Q5F3	151 aa		5.15	□□□□□ -1.58
MDM38	YOL027C	SPE1	P08432	466 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	YKU70	P32807	602 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	SKN7	P38889	622 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	MND2	P40577	368 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	PSP2	P50109	593 aa	Known RBP	5.14	□□□□□ -1.59
MDM38	YOL027C	BRE5	P53741	515 aa	Known RBP	5.14	□□□□□ -1.59
MDM38	YOL027C	CNM67	P53865	581 aa	Known RBP	5.14	□□□□□ -1.59
MDM38	YOL027C	YPL034W	Q03083	165 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	MCA1	Q08601	432 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
MDM38	YOL027C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	RIP-Chip
MDM38	YOL027C	YKL222C	P35995	705 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	YHL041W	P38730	149 aa		5.14	□□□□□ -1.59
MDM38	YOL027C	MIP6	P38760	659 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms