RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YSP2	Q06681	1438 aa		4.7	□□□□□ -1.66
TPM1	YNL079C	IQG1	Q12280	1495 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	CDC6	P09119	513 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	PEX6	P33760	1030 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	SPC42	P36094	363 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	BRN1	P38170	754 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	POA1	P38218	177 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	MNN1	P39106	762 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	TY4A-J	P47023	414 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	GTF1	P53260	183 aa	Predicted RBP	4.69	□□□□□ -1.66
TPM1	YNL079C	HDA1	P53973	706 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	GCN5	Q03330	439 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	YDR132C	Q03900	495 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	MMS1	Q06211	1407 aa		4.69	□□□□□ -1.66
TPM1	YNL079C	BUD3	P25558	1636 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	SPE1	P08432	466 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	GAS1	P22146	559 aa	Known RBP	4.68	□□□□□ -1.66
TPM1	YNL079C	MEF1	P25039	761 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	URA1	P28272	314 aa	Predicted RBP	4.68	□□□□□ -1.66
TPM1	YNL079C	CEP3	P40969	608 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	GCV2	P49095	1034 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	PSP2	P50109	593 aa	Known RBP	4.68	□□□□□ -1.66
TPM1	YNL079C	VPS30	Q02948	557 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	YDR514C	Q04408	483 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	ADY3	Q07732	790 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	MET7	Q08645	548 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	LTE1	P07866	1435 aa		4.68	□□□□□ -1.66
TPM1	YNL079C	RPS13	P05756	151 aa	Known RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	DAL7	P21826	554 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	TYE7	P33122	291 aa	Predicted RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	AIM3	P38266	947 aa	Known RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	FPR3	P38911	411 aa	Known RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	DSS1	P39112	969 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	NIT1	P40447	199 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	MET12	P46151	657 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	AVT1	P47082	602 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	TAD1	P53065	400 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	PRP43	P53131	767 aa	Known RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	VPS62	P53285	467 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
TPM1	YNL079C	NOG2	P53742	486 aa	Known RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	YKR011C	Q02209	353 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	UTP14	Q04500	899 aa	Known RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	SSL1	Q04673	461 aa	Predicted RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	RSC3	Q06639	885 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	RXT3	Q07458	294 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	BUD21	Q08492	214 aa	Predicted RBP	4.67	□□□□□ -1.66
TPM1	YNL079C	GPB1	Q08886	897 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	YPL277C	Q08989	487 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	HMI1	Q12039	706 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	GCN2	P15442	1659 aa		4.67	□□□□□ -1.66
TPM1	YNL079C	SOD2	P00447	233 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	CDC9	P04819	755 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	FBP1	P09201	348 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	GSY1	P23337	708 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	EMC1	P25574	760 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	VBA3	P25594	458 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	RPD3	P32561	433 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	MTC2	P34246	357 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	ATG19	P35193	415 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
TPM1	YNL079C	REH1	Q06709	432 aa		4.66	□□□□□ -1.66
TPM1	YNL079C	NOP14	Q99207	810 aa	Known RBP	4.66	□□□□□ -1.66
TPM1	YNL079C	RPS9A	O13516	197 aa	Known RBP	4.65	□□□□□ -1.67
TPM1	YNL079C	HIS5	P07172	385 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	RNQ1	P25367	405 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	YCL002C	P25565	263 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	CYS3	P31373	394 aa	Known RBP	4.65	□□□□□ -1.67
TPM1	YNL079C	ELM1	P32801	640 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	YIL108W	P40483	696 aa	Known RBP	4.65	□□□□□ -1.67
TPM1	YNL079C	URM1	P40554	99 aa	Predicted RBP	4.65	□□□□□ -1.67
TPM1	YNL079C	CHA4	P43634	648 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	SPT20	P50875	604 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	RIM8	P53179	542 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	DNM1	P54861	757 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	LRS4	Q04087	347 aa	Known RBP	4.65	□□□□□ -1.67
TPM1	YNL079C	ACK1	Q07622	623 aa	Predicted RBP	4.65	□□□□□ -1.67
TPM1	YNL079C	WHI4	Q07655	649 aa	Known RBP	4.65	□□□□□ -1.67
TPM1	YNL079C	BNR1	P40450	1375 aa		4.65	□□□□□ -1.67
TPM1	YNL079C	RPP2A	P05319	106 aa	Known RBP	4.64	□□□□□ -1.67
TPM1	YNL079C	PRP6	P19735	899 aa	Predicted RBP	4.64	□□□□□ -1.67
TPM1	YNL079C	PER1	P25625	357 aa		4.64	□□□□□ -1.67
TPM1	YNL079C	CDC20	P26309	610 aa		4.64	□□□□□ -1.67
TPM1	YNL079C	TFB2	Q02939	513 aa		4.64	□□□□□ -1.67
TPM1	YNL079C	TRM3	Q07527	1436 aa		4.63	□□□□□ -1.67
TPM1	YNL079C	GLT1	Q12680	2145 aa	Known RBP	4.63	□□□□□ -1.67
TPM1	YNL079C	SRD1	P09007	221 aa		4.63	□□□□□ -1.67
TPM1	YNL079C	RPL8A	P17076	256 aa	Known RBP	4.63	□□□□□ -1.67
TPM1	YNL079C	STO1	P34160	861 aa	Known RBP	4.63	□□□□□ -1.67
TPM1	YNL079C	CAF16	P43569	289 aa		4.63	□□□□□ -1.67
TPM1	YNL079C	HXT16	P47185	567 aa		4.63	□□□□□ -1.67
TPM1	YNL079C	YAP6	Q03935	383 aa		4.63	□□□□□ -1.67
TPM1	YNL079C	NOP12	Q08208	459 aa	Known RBP	4.63	□□□□□ -1.67
TPM1	YNL079C	UPC2	Q12151	913 aa		4.63	□□□□□ -1.67
TPM1	YNL079C	DRS2	P39524	1355 aa		4.63	□□□□□ -1.67
TPM1	YNL079C	TOD6	P34219	525 aa		4.62	□□□□□ -1.67
TPM1	YNL079C	THI80	P35202	319 aa		4.62	□□□□□ -1.67
TPM1	YNL079C	MCD4	P36051	919 aa		4.62	□□□□□ -1.67
TPM1	YNL079C	YJR142W	P47173	342 aa		4.62	□□□□□ -1.67
TPM1	YNL079C	YNL193W	P53870	558 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms