RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB5	YLR260W	FMP25	Q08023	583 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	NAT1	P12945	854 aa	Known RBP	3.99	□□□□□ -1.77
LCB5	YLR260W	ARE1	P25628	610 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	PDC6	P26263	563 aa	Known RBP	3.99	□□□□□ -1.77
LCB5	YLR260W	IMP2'	P32351	346 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	VMA8	P32610	256 aa	Known RBP	3.99	□□□□□ -1.77
LCB5	YLR260W	PEX5	P35056	612 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	YKL050C	P35736	922 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	BET3	P36149	193 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	YBL028C	P38202	106 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	RRP8	P38961	392 aa	Known RBP	3.99	□□□□□ -1.77
LCB5	YLR260W	ACA1	P39970	489 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	TMA108	P40462	946 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	PFD1	P46988	109 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	SUT1	P53032	299 aa	Known RBP	3.99	□□□□□ -1.77
LCB5	YLR260W	YGL242C	P53066	181 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	BTN2	P53286	410 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	SDA1	P53313	767 aa	Known RBP	3.99	□□□□□ -1.77
LCB5	YLR260W	GCR2	Q01722	534 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	YDR286C	Q05530	114 aa		3.99	□□□□□ -1.77
LCB5	YLR260W	NEW1	Q08972	1196 aa	Known RBP	3.99	□□□□□ -1.77
LCB5	YLR260W	NOT3	P06102	836 aa	Known RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	FBP1	P09201	348 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	NIC96	P34077	839 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	BAP2	P38084	609 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	YHL041W	P38730	149 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	RIM4	P38741	713 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	GEM1	P39722	662 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	YTA6	P40328	754 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	QDR2	P40474	542 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	HUL4	P40985	892 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	SEC27	P41811	889 aa	Known RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	RSC8	P43609	557 aa	Known RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	ATP22	P50273	684 aa	Predicted RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	EEB1	Q02891	456 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	OPT2	Q06593	877 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	TOM70	P07213	617 aa	Known RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	GCR1	P07261	785 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	KRS1	P15180	591 aa	Known RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	NOP4	P37838	685 aa	Known RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	KTR4	P38131	464 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	YHR218W	P38899	603 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	YMR147W	P40218	223 aa	Known RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	DJP1	P40564	432 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	ERP6	P53198	216 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	HEH2	Q03281	663 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	SPN1	Q06505	410 aa	Predicted RBP	3.98	□□□□□ -1.77
LCB5	YLR260W	YLR001C	Q07895	862 aa		3.98	□□□□□ -1.77
LCB5	YLR260W	SBP1	P10080	294 aa	Known RBP	3.97	□□□□□ -1.77
LCB5	YLR260W	MEF1	P25039	761 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	MKK2	P32491	506 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	SMY2	P32909	740 aa	Known RBP	3.97	□□□□□ -1.77
LCB5	YLR260W	ECM29	P38737	1868 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	DYS1	P38791	387 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	MXR1	P40029	184 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	IRR1	P40541	1150 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	HXT8	P40886	569 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	UBP15	P50101	1230 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	UBP2	Q01476	1272 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	RSC4	Q02206	625 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	BSC2	Q05611	235 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	YLR225C	Q05948	407 aa	Known RBP	3.97	□□□□□ -1.77
LCB5	YLR260W	SGD1	Q06132	899 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	SDH5	Q08230	162 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	PCL8	Q08966	492 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	CEX1	Q12453	761 aa		3.97	□□□□□ -1.77
LCB5	YLR260W	CDC19	P00549	500 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	LEU1	P07264	779 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	RPC31	P17890	251 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	CDC60	P26637	1090 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	KAP122	P32767	1081 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	MAC1	P35192	417 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	LDH1	P38139	375 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	ECM21	P38167	1117 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	ERG7	P38604	731 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	CCT3	P39077	534 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	VPS8	P39702	1274 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	GDH3	P39708	457 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	GPP2	P40106	250 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	SEC26	P41810	973 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	SGM1	P47166	707 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	VPS30	Q02948	557 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	HFD1	Q04458	532 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	MLC2	Q06580	163 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	YDL124W	Q07551	312 aa	Known RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	RTT10	Q08924	1013 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	YPL191C	Q08930	360 aa		3.96	□□□□□ -1.77
LCB5	YLR260W	KEL3	Q08979	651 aa	Predicted RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	CLF1	Q12309	687 aa	Predicted RBP	3.96	□□□□□ -1.77
LCB5	YLR260W	LAM4	P38800	1345 aa		3.96	□□□□□ -1.78
LCB5	YLR260W	CHO2	P05374	869 aa	Known RBP	3.96	□□□□□ -1.78
LCB5	YLR260W	UGA4	P32837	571 aa		3.96	□□□□□ -1.78
LCB5	YLR260W	PXA2	P34230	853 aa		3.96	□□□□□ -1.78
LCB5	YLR260W	GLY1	P37303	387 aa	Known RBP	3.96	□□□□□ -1.78
LCB5	YLR260W	TIF4631	P39935	952 aa	Known RBP	3.96	□□□□□ -1.78
LCB5	YLR260W	HIS6	P40545	261 aa		3.96	□□□□□ -1.78
LCB5	YLR260W	MRPS35	P53292	345 aa		3.96	□□□□□ -1.78
LCB5	YLR260W	SNP1	Q00916	300 aa	Predicted RBP	3.96	□□□□□ -1.78
LCB5	YLR260W	YLR346C	Q06139	101 aa		3.96	□□□□□ -1.78
LCB5	YLR260W	APL5	Q08951	932 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms