RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C TY1A-HP0C2I4 478 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C TY1A-AP0CX57 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-PR1P0CX58 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-ORP0CX59 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-PR2P0CX60 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-DR5P0CX65 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-ER2P0CX66 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-GR3P0CX67 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-LR1P0CX68 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-MR2P0CX69 440 aa1.97□□□□□ -2.09
IRC20YLR247C HMG2P12684 1045 aa1.97□□□□□ -2.09
IRC20YLR247C UGA1P17649 471 aa1.97□□□□□ -2.09
IRC20YLR247C PUP3P25451 205 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C PSY4P38193 441 aa1.97□□□□□ -2.09
IRC20YLR247C OSH3P38713 996 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C RTT105P40063 208 aa1.97□□□□□ -2.09
IRC20YLR247C SAP185P40856 1058 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-JR2P47099 440 aa1.97□□□□□ -2.09
IRC20YLR247C VPS75P53853 264 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-DR1Q03856 440 aa1.97□□□□□ -2.09
IRC20YLR247C VMS1Q04311 632 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C MYO5Q04439 1219 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C ERB1Q04660 807 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C TY1A-ML1Q04706 440 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C TY1A-BRQ12217 440 aa1.97□□□□□ -2.09
IRC20YLR247C RUP1Q12242 671 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-NL2Q12470 440 aa1.97□□□□□ -2.09
IRC20YLR247C TY1A-GR2Q12485 440 aa1.97□□□□□ -2.09
IRC20YLR247C TOM70P07213 617 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C HCA4P20448 770 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C UBC1P21734 215 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C ESS1P22696 170 aa1.97□□□□□ -2.09
IRC20YLR247C CSE1P33307 960 aa1.97□□□□□ -2.09
IRC20YLR247C YHL026CP38740 315 aa1.97□□□□□ -2.09
IRC20YLR247C PHB1P40961 287 aa1.97□□□□□ -2.09
IRC20YLR247C CSN12P47130 423 aa1.97□□□□□ -2.09
IRC20YLR247C SKO1Q02100 647 aa1.97□□□□□ -2.09
IRC20YLR247C SLD5Q03406 294 aa1.97□□□□□ -2.09
IRC20YLR247C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
IRC20YLR247C MAG2Q06436 670 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C NEW1Q08972 1196 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C PDR18P53756 1333 aa1.97□□□□□ -2.09
IRC20YLR247C NUC1P08466 329 aa1.97□□□□□ -2.09
IRC20YLR247C TRM1P15565 570 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C MRC1P25588 1096 aa1.97□□□□□ -2.09
IRC20YLR247C EFT1P32324 842 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C SRP40P32583 406 aaPredicted RBP1.97□□□□□ -2.09
IRC20YLR247C HXT13P39924 564 aa1.97□□□□□ -2.09
IRC20YLR247C ATG32P40458 529 aa1.97□□□□□ -2.09
IRC20YLR247C YIR042CP40586 236 aa1.97□□□□□ -2.09
IRC20YLR247C BIO5P53744 561 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C DID2P69771 204 aa1.97□□□□□ -2.09
IRC20YLR247C VTC3Q02725 835 aa1.97□□□□□ -2.09
IRC20YLR247C LCD1Q04377 747 aa1.97□□□□□ -2.09
IRC20YLR247C NOP12Q08208 459 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C ABP140Q08641 628 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C DSE3Q08729 430 aa1.97□□□□□ -2.09
IRC20YLR247C MAS2P11914 482 aa1.97□□□□□ -2.09
IRC20YLR247C SEC2P17065 759 aa1.97□□□□□ -2.09
IRC20YLR247C IMP2'P32351 346 aa1.97□□□□□ -2.09
IRC20YLR247C SWE1P32944 819 aa1.97□□□□□ -2.09
IRC20YLR247C YKL023WP36103 277 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C SIP3P38717 1229 aa1.97□□□□□ -2.09
IRC20YLR247C NEM1P38757 446 aa1.97□□□□□ -2.09
IRC20YLR247C ERP6P53198 216 aa1.97□□□□□ -2.09
IRC20YLR247C YNL247WP53852 767 aaKnown RBP1.97□□□□□ -2.09
IRC20YLR247C VPS72Q03388 795 aa1.97□□□□□ -2.09
IRC20YLR247C NDE2Q07500 545 aa1.97□□□□□ -2.09
IRC20YLR247C YPL260WQ08977 551 aa1.97□□□□□ -2.09
IRC20YLR247C APN2P38207 520 aa1.96□□□□□ -2.1
IRC20YLR247C RPA14P50106 137 aa1.96□□□□□ -2.1
IRC20YLR247C YNR068CP53754 272 aa1.96□□□□□ -2.1
IRC20YLR247C ECM23Q02710 187 aa1.96□□□□□ -2.1
IRC20YLR247C SPO19Q03029 223 aa1.96□□□□□ -2.1
IRC20YLR247C TFB3Q03290 321 aa1.96□□□□□ -2.1
IRC20YLR247C YLR281CQ05863 155 aa1.96□□□□□ -2.1
IRC20YLR247C CRT10Q08226 957 aa1.96□□□□□ -2.1
IRC20YLR247C RPN5Q12250 445 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C YBL111CQ3E7Y5 667 aa1.96□□□□□ -2.1
IRC20YLR247C CDC37P06101 506 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C ATP1P07251 545 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C SAM1P10659 382 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C SEC20P28791 383 aa1.96□□□□□ -2.1
IRC20YLR247C CYS3P31373 394 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C TPD3P31383 635 aa1.96□□□□□ -2.1
IRC20YLR247C SHP1P34223 423 aa1.96□□□□□ -2.1
IRC20YLR247C TVP38P36164 337 aa1.96□□□□□ -2.1
IRC20YLR247C REG2P38232 338 aa1.96□□□□□ -2.1
IRC20YLR247C PEX28P38848 579 aa1.96□□□□□ -2.1
IRC20YLR247C UME6P39001 836 aa1.96□□□□□ -2.1
IRC20YLR247C SWD1P39706 426 aa1.96□□□□□ -2.1
IRC20YLR247C ISC1P40015 477 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C ZAP1P47043 880 aa1.96□□□□□ -2.1
IRC20YLR247C LIF1P53150 421 aa1.96□□□□□ -2.1
IRC20YLR247C YNL193WP53870 558 aa1.96□□□□□ -2.1
IRC20YLR247C ATG17Q06410 417 aa1.96□□□□□ -2.1
IRC20YLR247C TOR2P32600 2474 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C OPI1P21957 404 aa1.96□□□□□ -2.1
IRC20YLR247C NPL6P32832 435 aa1.96□□□□□ -2.1
IRC20YLR247C POL12P38121 705 aaPredicted RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms