RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W RFA1P22336 621 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SLX4YLR135W SET5P38890 526 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W CKB2P38930 258 aa1.79□□□□□ -2.12
SLX4YLR135W GZF3P42944 551 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W HDA1P53973 706 aa1.79□□□□□ -2.12
SLX4YLR135W VPS30Q02948 557 aa1.79□□□□□ -2.12
SLX4YLR135W ATG33Q06485 197 aa1.79□□□□□ -2.12
SLX4YLR135W FAP7Q12055 197 aaPredicted RBP1.79□□□□□ -2.12
SLX4YLR135W ICT1Q12385 394 aa1.79□□□□□ -2.12
SLX4YLR135W HMG1P12683 1054 aa1.79□□□□□ -2.12
SLX4YLR135W DAL7P21826 554 aa1.79□□□□□ -2.12
SLX4YLR135W PER1P25625 357 aa1.79□□□□□ -2.12
SLX4YLR135W APL1P27351 700 aa1.79□□□□□ -2.12
SLX4YLR135W CCR4P31384 837 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W SRP101P32916 621 aa1.79□□□□□ -2.12
SLX4YLR135W TYS1P36421 394 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W YBR071WP38243 211 aa1.79□□□□□ -2.12
SLX4YLR135W HSL7P38274 827 aa1.79□□□□□ -2.12
SLX4YLR135W RPN10P38886 268 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W MND2P40577 368 aa1.79□□□□□ -2.12
SLX4YLR135W DUG1P43616 481 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W ALY2P47029 1046 aa1.79□□□□□ -2.12
SLX4YLR135W YJR008WP47085 338 aa1.79□□□□□ -2.12
SLX4YLR135W YJR096WP47137 282 aa1.79□□□□□ -2.12
SLX4YLR135W PSP2P50109 593 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W SPT20P50875 604 aa1.79□□□□□ -2.12
SLX4YLR135W LRS4Q04087 347 aaKnown RBP1.79□□□□□ -2.12
SLX4YLR135W YDR338CQ05497 695 aa1.79□□□□□ -2.12
SLX4YLR135W GUD1Q07729 489 aa1.79□□□□□ -2.12
SLX4YLR135W TMA17Q12513 150 aa1.79□□□□□ -2.12
SLX4YLR135W RPS9AO13516 197 aaKnown RBP1.78□□□□□ -2.12
SLX4YLR135W DIF1O13577 133 aa1.78□□□□□ -2.12
SLX4YLR135W TOP1P04786 769 aa1.78□□□□□ -2.12
SLX4YLR135W SPE1P08432 466 aa1.78□□□□□ -2.12
SLX4YLR135W CYS3P31373 394 aaKnown RBP1.78□□□□□ -2.12
SLX4YLR135W YKR018CP36114 725 aa1.78□□□□□ -2.12
SLX4YLR135W ZRG8P40021 1076 aa1.78□□□□□ -2.12
SLX4YLR135W CCT5P40413 562 aaKnown RBP1.78□□□□□ -2.12
SLX4YLR135W URM1P40554 99 aaPredicted RBP1.78□□□□□ -2.12
SLX4YLR135W RET2P43621 546 aa1.78□□□□□ -2.12
SLX4YLR135W STU2P46675 888 aa1.78□□□□□ -2.12
SLX4YLR135W BNA2P47125 453 aa1.78□□□□□ -2.12
SLX4YLR135W PEX8P53248 589 aa1.78□□□□□ -2.12
SLX4YLR135W FOL1P53848 824 aa1.78□□□□□ -2.12
SLX4YLR135W COG6P53959 839 aa1.78□□□□□ -2.12
SLX4YLR135W ADY3Q07732 790 aa1.78□□□□□ -2.12
SLX4YLR135W TRE2Q08693 809 aa1.78□□□□□ -2.12
SLX4YLR135W YTM1Q12024 460 aaPredicted RBP1.78□□□□□ -2.12
SLX4YLR135W GIN4Q12263 1142 aa1.78□□□□□ -2.12
SLX4YLR135W APM4Q99186 491 aa1.78□□□□□ -2.12
SLX4YLR135W YCL002CP25565 263 aa1.78□□□□□ -2.13
SLX4YLR135W EUG1P32474 517 aa1.78□□□□□ -2.13
SLX4YLR135W PRP19P32523 503 aaKnown RBP1.78□□□□□ -2.13
SLX4YLR135W CTF8P38877 133 aa1.78□□□□□ -2.13
SLX4YLR135W OAF1P39720 1047 aaPredicted RBP1.78□□□□□ -2.13
SLX4YLR135W DOT6P40059 670 aaKnown RBP1.78□□□□□ -2.13
SLX4YLR135W TPM2P40414 161 aa1.78□□□□□ -2.13
SLX4YLR135W CEP3P40969 608 aa1.78□□□□□ -2.13
SLX4YLR135W MNN11P46985 422 aaKnown RBP1.78□□□□□ -2.13
SLX4YLR135W ZIP2P53061 704 aa1.78□□□□□ -2.13
SLX4YLR135W DUS1P53759 423 aaKnown RBP1.78□□□□□ -2.13
SLX4YLR135W YOL057WQ08225 711 aa1.78□□□□□ -2.13
SLX4YLR135W HAL9Q12180 1030 aa1.78□□□□□ -2.13
SLX4YLR135W CYC1P00044 109 aaPredicted RBP1.77□□□□□ -2.13
SLX4YLR135W PRC1P00729 532 aa1.77□□□□□ -2.13
SLX4YLR135W ATP4P05626 244 aa1.77□□□□□ -2.13
SLX4YLR135W DID4P36108 232 aa1.77□□□□□ -2.13
SLX4YLR135W YKR051WP36142 418 aa1.77□□□□□ -2.13
SLX4YLR135W SDP1P40479 209 aa1.77□□□□□ -2.13
SLX4YLR135W SHR5P41912 237 aa1.77□□□□□ -2.13
SLX4YLR135W MET12P46151 657 aa1.77□□□□□ -2.13
SLX4YLR135W NIT2P47016 307 aa1.77□□□□□ -2.13
SLX4YLR135W YJR120WP47157 116 aa1.77□□□□□ -2.13
SLX4YLR135W AIM14P53109 570 aa1.77□□□□□ -2.13
SLX4YLR135W PUS2P53167 370 aa1.77□□□□□ -2.13
SLX4YLR135W RTS3P53289 263 aa1.77□□□□□ -2.13
SLX4YLR135W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
SLX4YLR135W YOR022CQ12204 715 aa1.77□□□□□ -2.13
SLX4YLR135W GAL10P04397 699 aa1.76□□□□□ -2.13
SLX4YLR135W CDC6P09119 513 aa1.76□□□□□ -2.13
SLX4YLR135W CMP2P14747 604 aa1.76□□□□□ -2.13
SLX4YLR135W AEP2P22136 580 aa1.76□□□□□ -2.13
SLX4YLR135W RPD3P32561 433 aa1.76□□□□□ -2.13
SLX4YLR135W SAP190P36123 1033 aa1.76□□□□□ -2.13
SLX4YLR135W TRZ1P36159 838 aaPredicted RBP1.76□□□□□ -2.13
SLX4YLR135W GRX7P38068 203 aa1.76□□□□□ -2.13
SLX4YLR135W MAL31P38156 614 aa1.76□□□□□ -2.13
SLX4YLR135W POA1P38218 177 aa1.76□□□□□ -2.13
SLX4YLR135W YIL108WP40483 696 aaKnown RBP1.76□□□□□ -2.13
SLX4YLR135W YJR039WP47107 1121 aa1.76□□□□□ -2.13
SLX4YLR135W YGR153WP48238 217 aa1.76□□□□□ -2.13
SLX4YLR135W PEX14P53112 341 aa1.76□□□□□ -2.13
SLX4YLR135W PCL10P53124 433 aa1.76□□□□□ -2.13
SLX4YLR135W NPY1P53164 384 aa1.76□□□□□ -2.13
SLX4YLR135W VPS62P53285 467 aa1.76□□□□□ -2.13
SLX4YLR135W PBP1P53297 722 aaKnown RBP1.76□□□□□ -2.13
SLX4YLR135W ECM9Q02202 377 aa1.76□□□□□ -2.13
SLX4YLR135W YDR132CQ03900 495 aa1.76□□□□□ -2.13
SLX4YLR135W SSL1Q04673 461 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 195 ms