RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C GLO4Q12320 285 aa6.64□□□□□ -1.35
DEF1YKL054C APM4Q99186 491 aa6.64□□□□□ -1.35
DEF1YKL054C RPC53P25441 422 aa6.64□□□□□ -1.35
DEF1YKL054C PXA2P34230 853 aa6.64□□□□□ -1.35
DEF1YKL054C YKL100CP34248 587 aa6.64□□□□□ -1.35
DEF1YKL054C YBR238CP38330 731 aaKnown RBP6.64□□□□□ -1.35
DEF1YKL054C DUN1P39009 513 aa6.64□□□□□ -1.35
DEF1YKL054C ACO2P39533 789 aa6.64□□□□□ -1.35
DEF1YKL054C LSM5P40089 93 aaKnown RBP6.64□□□□□ -1.35
DEF1YKL054C SBE2P42223 864 aaKnown RBP6.64□□□□□ -1.35
DEF1YKL054C ATP22P50273 684 aaPredicted RBP6.64□□□□□ -1.35
DEF1YKL054C MRPL19P53875 158 aa6.64□□□□□ -1.35
DEF1YKL054C UTP5Q04177 643 aaKnown RBP6.64□□□□□ -1.35
DEF1YKL054C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35 RIP-Chip
DEF1YKL054C LEU1P07264 779 aaKnown RBP6.63□□□□□ -1.35
DEF1YKL054C ATP12P22135 325 aa6.63□□□□□ -1.35
DEF1YKL054C CDC60P26637 1090 aaKnown RBP6.63□□□□□ -1.35
DEF1YKL054C SPC72P39723 622 aa6.63□□□□□ -1.35
DEF1YKL054C VHS3Q08438 674 aa6.63□□□□□ -1.35
DEF1YKL054C YDL176WQ12027 708 aa6.63□□□□□ -1.35
DEF1YKL054C DBP10Q12389 995 aaKnown RBP6.63□□□□□ -1.35
DEF1YKL054C RVB2Q12464 471 aaKnown RBP6.63□□□□□ -1.35
DEF1YKL054C SNF1P06782 633 aaKnown RBP6.62□□□□□ -1.35
DEF1YKL054C NPP1P25353 742 aa6.62□□□□□ -1.35
DEF1YKL054C ADD66P36040 267 aa6.62□□□□□ -1.35
DEF1YKL054C NCL1P38205 684 aaKnown RBP6.62□□□□□ -1.35
DEF1YKL054C NEM1P38757 446 aa6.62□□□□□ -1.35
DEF1YKL054C AXL2P38928 823 aa6.62□□□□□ -1.35
DEF1YKL054C SHU2P38957 223 aa6.62□□□□□ -1.35
DEF1YKL054C MAM1P40065 302 aa6.62□□□□□ -1.35
DEF1YKL054C PUS4P48567 403 aaKnown RBP6.62□□□□□ -1.35
DEF1YKL054C UBP15P50101 1230 aa6.62□□□□□ -1.35
DEF1YKL054C UTP21Q06078 939 aaPredicted RBP6.62□□□□□ -1.35
DEF1YKL054C YPR027CQ12079 277 aa6.62□□□□□ -1.35
DEF1YKL054C RPS21BQ3E754 87 aaKnown RBP6.62□□□□□ -1.35
DEF1YKL054C ENA1P13587 1091 aa6.62□□□□□ -1.35
DEF1YKL054C DAL7P21826 554 aa6.62□□□□□ -1.35
DEF1YKL054C RAD26P40352 1085 aa6.62□□□□□ -1.35
DEF1YKL054C AXL1P40851 1208 aa6.62□□□□□ -1.35
DEF1YKL054C YNR040WP53736 256 aa6.62□□□□□ -1.35
DEF1YKL054C SSL2Q00578 843 aa6.62□□□□□ -1.35
DEF1YKL054C ENA2Q01896 1091 aa6.62□□□□□ -1.35
DEF1YKL054C GNT1Q12096 491 aa6.62□□□□□ -1.35
DEF1YKL054C ENT1Q12518 454 aa6.62□□□□□ -1.35
DEF1YKL054C ENA5Q12691 1091 aa6.62□□□□□ -1.35
DEF1YKL054C DBP2P24783 546 aaKnown RBP6.61□□□□□ -1.35
DEF1YKL054C FAT1P38225 669 aa6.61□□□□□ -1.35
DEF1YKL054C PNT1P38969 423 aa6.61□□□□□ -1.35
DEF1YKL054C HNT2P49775 206 aa6.61□□□□□ -1.35
DEF1YKL054C CDC45Q08032 650 aa6.61□□□□□ -1.35
DEF1YKL054C TAH18Q12181 623 aa6.61□□□□□ -1.35
DEF1YKL054C SPT7P35177 1332 aa6.61□□□□□ -1.35
DEF1YKL054C MTF2P10849 440 aa6.61□□□□□ -1.35
DEF1YKL054C NCP1P16603 691 aaKnown RBP6.61□□□□□ -1.35
DEF1YKL054C MSH1P25846 959 aa6.61□□□□□ -1.35
DEF1YKL054C MLS1P30952 554 aa6.61□□□□□ -1.35
DEF1YKL054C HXT16P47185 567 aa6.61□□□□□ -1.35
DEF1YKL054C ARE2P53629 642 aaKnown RBP6.61□□□□□ -1.35
DEF1YKL054C TY1A-MR1Q04215 440 aa6.61□□□□□ -1.35
DEF1YKL054C DUS3Q06053 668 aaKnown RBP6.61□□□□□ -1.35
DEF1YKL054C MET7Q08645 548 aa6.61□□□□□ -1.35
DEF1YKL054C SEM1O94742 89 aa6.6□□□□□ -1.35
DEF1YKL054C FUR1P18562 216 aaKnown RBP6.6□□□□□ -1.35
DEF1YKL054C ACE2P21192 770 aa6.6□□□□□ -1.35
DEF1YKL054C OAF3P36023 863 aa6.6□□□□□ -1.35
DEF1YKL054C EMC3P36039 253 aa6.6□□□□□ -1.35
DEF1YKL054C CCZ1P38273 704 aa6.6□□□□□ -1.35
DEF1YKL054C YHR218WP38899 603 aa6.6□□□□□ -1.35
DEF1YKL054C YIR007WP40566 764 aa6.6□□□□□ -1.35
DEF1YKL054C ROG3P43602 733 aa6.6□□□□□ -1.35
DEF1YKL054C PRP43P53131 767 aaKnown RBP6.6□□□□□ -1.35
DEF1YKL054C ARP7Q12406 477 aa6.6□□□□□ -1.35
DEF1YKL054C XRS2P33301 854 aa6.6□□□□□ -1.35
DEF1YKL054C LAM1P38851 1228 aa6.6□□□□□ -1.35
DEF1YKL054C IMA5P40884 581 aa6.6□□□□□ -1.35
DEF1YKL054C VPS53P47061 822 aa6.6□□□□□ -1.35
DEF1YKL054C ASK10P48361 1146 aa6.6□□□□□ -1.35
DEF1YKL054C RRT6P53117 311 aaPredicted RBP6.6□□□□□ -1.35
DEF1YKL054C ENV11P53246 860 aa6.6□□□□□ -1.35
DEF1YKL054C SYF1Q04048 859 aaPredicted RBP6.6□□□□□ -1.35
DEF1YKL054C YLR257WQ06146 321 aaKnown RBP6.6□□□□□ -1.35
DEF1YKL054C SPP382Q06411 708 aaPredicted RBP6.6□□□□□ -1.35
DEF1YKL054C ENV7Q12003 364 aa6.6□□□□□ -1.35
DEF1YKL054C TRM8Q12009 286 aa6.6□□□□□ -1.35
DEF1YKL054C SMC6Q12749 1114 aa6.6□□□□□ -1.35
DEF1YKL054C HTS1P07263 546 aaKnown RBP6.59□□□□□ -1.35
DEF1YKL054C FUS1P11710 512 aa6.59□□□□□ -1.35
DEF1YKL054C PGS1P25578 521 aa6.59□□□□□ -1.35
DEF1YKL054C GAR1P28007 205 aaKnown RBP6.59□□□□□ -1.35
DEF1YKL054C CDC12P32468 407 aaKnown RBP6.59□□□□□ -1.35
DEF1YKL054C SEG2P34250 1132 aa6.59□□□□□ -1.35
DEF1YKL054C RGA1P39083 1007 aa6.59□□□□□ -1.35
DEF1YKL054C KAP123P40069 1113 aaKnown RBP6.59□□□□□ -1.35
DEF1YKL054C SLS1P42900 643 aa6.59□□□□□ -1.35
DEF1YKL054C SET2P46995 733 aaKnown RBP6.59□□□□□ -1.35
DEF1YKL054C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35 RIP-Chip
DEF1YKL054C RED1P14291 827 aa6.58□□□□□ -1.36
DEF1YKL054C FUN30P31380 1131 aa6.58□□□□□ -1.36
DEF1YKL054C ALG3P38179 458 aa6.58□□□□□ -1.36
DEF1YKL054C RGD1P38339 666 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms