RNA–Protein interactions for RNA: YJL142C

IRC9, Transcript of Dubious open reading frame, yeast

Gene IRC9, Length 393 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC9	YJL142C	PCT1	P13259	424 aa		4.69	□□□□□ -1.66
IRC9	YJL142C	MSP1	P28737	362 aa		4.69	□□□□□ -1.66
IRC9	YJL142C	SWE1	P32944	819 aa		4.69	□□□□□ -1.66
IRC9	YJL142C	IMO32	P53219	342 aa		4.69	□□□□□ -1.66
IRC9	YJL142C	MRH1	Q12117	320 aa	Predicted RBP	4.69	□□□□□ -1.66
IRC9	YJL142C	UPC2	Q12151	913 aa		4.69	□□□□□ -1.66
IRC9	YJL142C	EDE1	P34216	1381 aa		4.68	□□□□□ -1.66
IRC9	YJL142C	DSN1	P40568	576 aa		4.68	□□□□□ -1.66
IRC9	YJL142C	DOS2	P54858	310 aa		4.68	□□□□□ -1.66
IRC9	YJL142C	PRP3	Q03338	469 aa	Predicted RBP	4.68	□□□□□ -1.66
IRC9	YJL142C	CDC45	Q08032	650 aa		4.68	□□□□□ -1.66
IRC9	YJL142C	MDM38	Q08179	573 aa		4.68	□□□□□ -1.66
IRC9	YJL142C	CYC8	P14922	966 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	RAD27	P26793	382 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	TMT1	P32643	299 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	PPZ2	P33329	710 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	YKL151C	P36059	337 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	STM1	P39015	273 aa	Known RBP	4.67	□□□□□ -1.66
IRC9	YJL142C	TPM2	P40414	161 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	PIL1	P53252	339 aa	Known RBP	4.67	□□□□□ -1.66
IRC9	YJL142C	SRT1	Q03175	343 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	YNL162W-A	Q3E7A8	72 aa		4.67	□□□□□ -1.66
IRC9	YJL142C	FUN30	P31380	1131 aa		4.66	□□□□□ -1.66
IRC9	YJL142C	ERG5	P54781	538 aa		4.66	□□□□□ -1.66
IRC9	YJL142C	ORC1	P54784	914 aa	Predicted RBP	4.66	□□□□□ -1.66
IRC9	YJL142C	IML1	P47170	1584 aa		4.65	□□□□□ -1.66
IRC9	YJL142C	NUP188	P52593	1655 aa	Known RBP	4.65	□□□□□ -1.66
IRC9	YJL142C	TUB1	P09733	447 aa	Known RBP	4.65	□□□□□ -1.67
IRC9	YJL142C	NNF2	P53253	936 aa		4.65	□□□□□ -1.67
IRC9	YJL142C	ESC2	Q06340	456 aa		4.65	□□□□□ -1.67
IRC9	YJL142C	RVB2	Q12464	471 aa	Known RBP	4.65	□□□□□ -1.67
IRC9	YJL142C	GFA1	P14742	717 aa	Known RBP	4.64	□□□□□ -1.67
IRC9	YJL142C	LTV1	P34078	463 aa		4.64	□□□□□ -1.67
IRC9	YJL142C	PPS1	P38148	807 aa		4.64	□□□□□ -1.67
IRC9	YJL142C	YHL017W	P38745	532 aa		4.64	□□□□□ -1.67
IRC9	YJL142C	VPS27	P40343	622 aa	Known RBP	4.64	□□□□□ -1.67
IRC9	YJL142C	VPS4	P52917	437 aa		4.64	□□□□□ -1.67
IRC9	YJL142C	HRQ1	Q05549	1077 aa		4.64	□□□□□ -1.67
IRC9	YJL142C	RPP0	P05317	312 aa	Known RBP	4.63	□□□□□ -1.67
IRC9	YJL142C	CLB1	P24868	471 aa		4.63	□□□□□ -1.67
IRC9	YJL142C	SED4	P25365	1065 aa		4.63	□□□□□ -1.67
IRC9	YJL142C	DEP1	P31385	405 aa		4.63	□□□□□ -1.67
IRC9	YJL142C	STE14	P32584	239 aa		4.63	□□□□□ -1.67
IRC9	YJL142C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
IRC9	YJL142C	TDP1	P38319	544 aa		4.63	□□□□□ -1.67
IRC9	YJL142C	GIC1	P38785	314 aa		4.63	□□□□□ -1.67
IRC9	YJL142C	RPS26A	P39938	119 aa	Known RBP	4.63	□□□□□ -1.67
IRC9	YJL142C	RPS26B	P39939	119 aa	Known RBP	4.63	□□□□□ -1.67
IRC9	YJL142C	DUS1	P53759	423 aa	Known RBP	4.63	□□□□□ -1.67
IRC9	YJL142C	SLU7	Q02775	382 aa	Known RBP	4.63	□□□□□ -1.67
IRC9	YJL142C	VPS60	Q03390	229 aa		4.63	□□□□□ -1.67
IRC9	YJL142C	ILV6	P25605	309 aa	Known RBP	4.62	□□□□□ -1.67
IRC9	YJL142C	SIC1	P38634	284 aa		4.62	□□□□□ -1.67
IRC9	YJL142C	TCD1	P38756	429 aa		4.62	□□□□□ -1.67
IRC9	YJL142C	DAS1	P47005	663 aa		4.62	□□□□□ -1.67
IRC9	YJL142C	TAN1	P53072	289 aa	Predicted RBP	4.62	□□□□□ -1.67
IRC9	YJL142C	SEC5	P89102	971 aa		4.62	□□□□□ -1.67
IRC9	YJL142C	PDS5	Q04264	1277 aa		4.62	□□□□□ -1.67
IRC9	YJL142C	RLP24	Q07915	199 aa	Known RBP	4.62	□□□□□ -1.67
IRC9	YJL142C	ETT1	Q08421	412 aa	Known RBP	4.62	□□□□□ -1.67
IRC9	YJL142C	LSP1	Q12230	341 aa	Known RBP	4.62	□□□□□ -1.67
IRC9	YJL142C	SSF1	P38789	453 aa	Predicted RBP	4.61	□□□□□ -1.67
IRC9	YJL142C	IPL1	P38991	367 aa		4.61	□□□□□ -1.67
IRC9	YJL142C	CHZ1	P40019	153 aa	Predicted RBP	4.61	□□□□□ -1.67
IRC9	YJL142C	GLO1	P50107	326 aa		4.61	□□□□□ -1.67
IRC9	YJL142C	NOP7	P53261	605 aa	Known RBP	4.61	□□□□□ -1.67
IRC9	YJL142C	LCD1	Q04377	747 aa		4.61	□□□□□ -1.67
IRC9	YJL142C	FRE5	Q08908	694 aa		4.61	□□□□□ -1.67
IRC9	YJL142C	RTT10	Q08924	1013 aa		4.61	□□□□□ -1.67
IRC9	YJL142C	BYE1	P36106	594 aa		4.6	□□□□□ -1.67
IRC9	YJL142C	FLO10	P36170	1169 aa		4.6	□□□□□ -1.67
IRC9	YJL142C	MED8	P38304	223 aa		4.6	□□□□□ -1.67
IRC9	YJL142C	ECM1	P39715	212 aa		4.6	□□□□□ -1.67
IRC9	YJL142C	TAH11	P47112	604 aa		4.6	□□□□□ -1.67
IRC9	YJL142C	GRX3	Q03835	250 aa		4.6	□□□□□ -1.67
IRC9	YJL142C	COG8	Q04632	607 aa		4.6	□□□□□ -1.67
IRC9	YJL142C	BMS1	Q08965	1183 aa	Known RBP	4.6	□□□□□ -1.67
IRC9	YJL142C	GEA1	P47102	1408 aa	Predicted RBP	4.6	□□□□□ -1.67
IRC9	YJL142C	PDR5	P33302	1511 aa	Known RBP	4.6	□□□□□ -1.67
IRC9	YJL142C	CIN4	P39110	191 aa		4.59	□□□□□ -1.67
IRC9	YJL142C	RSC1	P53236	928 aa		4.59	□□□□□ -1.67
IRC9	YJL142C	RPN7	Q06103	429 aa	Known RBP	4.59	□□□□□ -1.67
IRC9	YJL142C	NOP14	Q99207	810 aa	Known RBP	4.59	□□□□□ -1.67
IRC9	YJL142C	SRP54	P20424	541 aa	Known RBP	4.58	□□□□□ -1.68
IRC9	YJL142C	RPN11	P43588	306 aa	Known RBP	4.58	□□□□□ -1.68
IRC9	YJL142C	VPS73	P53142	486 aa	Known RBP	4.58	□□□□□ -1.68
IRC9	YJL142C	PAP2	P53632	584 aa	Known RBP	4.58	□□□□□ -1.68
IRC9	YJL142C	MDG1	P53885	366 aa		4.58	□□□□□ -1.68
IRC9	YJL142C	THI7	Q05998	598 aa		4.58	□□□□□ -1.68
IRC9	YJL142C	TMA46	Q12000	345 aa	Known RBP	4.58	□□□□□ -1.68
IRC9	YJL142C	HCA4	P20448	770 aa	Known RBP	4.57	□□□□□ -1.68
IRC9	YJL142C	RPC82	P32349	654 aa		4.57	□□□□□ -1.68
IRC9	YJL142C	SWI3	P32591	825 aa		4.57	□□□□□ -1.68
IRC9	YJL142C	ECM16	Q04217	1267 aa	Known RBP	4.57	□□□□□ -1.68
IRC9	YJL142C	YSH1	Q06224	779 aa	Predicted RBP	4.57	□□□□□ -1.68
IRC9	YJL142C	NOP8	Q08287	484 aa	Predicted RBP	4.57	□□□□□ -1.68
IRC9	YJL142C	YPL066W	Q12194	479 aa		4.57	□□□□□ -1.68
IRC9	YJL142C	GCN2	P15442	1659 aa		4.57	□□□□□ -1.68
IRC9	YJL142C	YRF1-2	P40105	1681 aa		4.57	□□□□□ -1.68
IRC9	YJL142C	RAD9	P14737	1309 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms