RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C MEF2P39677 819 aa3.62□□□□□ -1.83
YIR040CYIR040C PES4P39684 611 aa3.62□□□□□ -1.83
YIR040CYIR040C SPF1P39986 1215 aaKnown RBP3.62□□□□□ -1.83
YIR040CYIR040C NPP2P39997 493 aa3.62□□□□□ -1.83
YIR040CYIR040C DOT6P40059 670 aaKnown RBP3.62□□□□□ -1.83
YIR040CYIR040C SDS3P40505 327 aa3.62□□□□□ -1.83
YIR040CYIR040C DSL1P53847 754 aa3.62□□□□□ -1.83
YIR040CYIR040C PNG1Q02890 363 aa3.62□□□□□ -1.83
YIR040CYIR040C DUS4Q06063 367 aa3.62□□□□□ -1.83
YIR040CYIR040C YLR352WQ06479 807 aa3.62□□□□□ -1.83
YIR040CYIR040C RRP9Q06506 573 aaKnown RBP3.62□□□□□ -1.83
YIR040CYIR040C FOB1O13329 566 aa3.61□□□□□ -1.83
YIR040CYIR040C THS1P04801 734 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C KIN2P13186 1147 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C SUI2P20459 304 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C ZUO1P32527 433 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C SRP40P32583 406 aaPredicted RBP3.61□□□□□ -1.83
YIR040CYIR040C TOD6P34219 525 aa3.61□□□□□ -1.83
YIR040CYIR040C RRN3P36070 627 aa3.61□□□□□ -1.83
YIR040CYIR040C RRP8P38961 392 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C SWD1P39706 426 aa3.61□□□□□ -1.83
YIR040CYIR040C RRT14P40470 206 aa3.61□□□□□ -1.83
YIR040CYIR040C IRR1P40541 1150 aa3.61□□□□□ -1.83
YIR040CYIR040C PXA1P41909 870 aa3.61□□□□□ -1.83
YIR040CYIR040C IOC3P43596 787 aa3.61□□□□□ -1.83
YIR040CYIR040C ATP22P50273 684 aaPredicted RBP3.61□□□□□ -1.83
YIR040CYIR040C SHE10P53075 577 aa3.61□□□□□ -1.83
YIR040CYIR040C GCN5Q03330 439 aa3.61□□□□□ -1.83
YIR040CYIR040C MSC2Q03455 724 aa3.61□□□□□ -1.83
YIR040CYIR040C SHE9Q04172 456 aa3.61□□□□□ -1.83
YIR040CYIR040C SIZ1Q04195 904 aa3.61□□□□□ -1.83
YIR040CYIR040C UTP14Q04500 899 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C ATG38Q05789 226 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C RIX7Q07844 837 aaKnown RBP3.61□□□□□ -1.83
YIR040CYIR040C YGR161W-CQ3E744 92 aa3.61□□□□□ -1.83
YIR040CYIR040C CDC6P09119 513 aa3.6□□□□□ -1.83
YIR040CYIR040C BUD14P27637 709 aa3.6□□□□□ -1.83
YIR040CYIR040C VPH1P32563 840 aaKnown RBP3.6□□□□□ -1.83
YIR040CYIR040C ESL2P36168 1195 aa3.6□□□□□ -1.83
YIR040CYIR040C FLR1P38124 548 aa3.6□□□□□ -1.83
YIR040CYIR040C RXT2P38255 430 aa3.6□□□□□ -1.83
YIR040CYIR040C OPY1P38271 328 aa3.6□□□□□ -1.83
YIR040CYIR040C GIC1P38785 314 aa3.6□□□□□ -1.83
YIR040CYIR040C SRB7P47822 140 aa3.6□□□□□ -1.83
YIR040CYIR040C OCA1P50946 238 aaPredicted RBP3.6□□□□□ -1.83
YIR040CYIR040C EFM5P53200 248 aaKnown RBP3.6□□□□□ -1.83
YIR040CYIR040C PXR1P53335 271 aaPredicted RBP3.6□□□□□ -1.83
YIR040CYIR040C YNL050CP53952 270 aa3.6□□□□□ -1.83
YIR040CYIR040C TIM11P81449 96 aaPredicted RBP3.6□□□□□ -1.83
YIR040CYIR040C ERB1Q04660 807 aaKnown RBP3.6□□□□□ -1.83
YIR040CYIR040C MRD1Q06106 887 aaKnown RBP3.6□□□□□ -1.83
YIR040CYIR040C ATG26Q06321 1198 aa3.6□□□□□ -1.83
YIR040CYIR040C TDA5Q06417 326 aaKnown RBP3.6□□□□□ -1.83
YIR040CYIR040C ESC8Q08119 714 aa3.6□□□□□ -1.83
YIR040CYIR040C YOR352WQ08816 343 aa3.6□□□□□ -1.83
YIR040CYIR040C SKI3P17883 1432 aaKnown RBP3.6□□□□□ -1.83
YIR040CYIR040C RPB2P08518 1224 aaKnown RBP3.59□□□□□ -1.83
YIR040CYIR040C KSS1P14681 368 aa3.59□□□□□ -1.83
YIR040CYIR040C HNM1P19807 563 aa3.59□□□□□ -1.83
YIR040CYIR040C CDC12P32468 407 aaKnown RBP3.59□□□□□ -1.83
YIR040CYIR040C GRX4P32642 244 aa3.59□□□□□ -1.83
YIR040CYIR040C TIF3P34167 436 aaKnown RBP3.59□□□□□ -1.83
YIR040CYIR040C TAT2P38967 592 aa3.59□□□□□ -1.83
YIR040CYIR040C CAJ1P39101 391 aa3.59□□□□□ -1.83
YIR040CYIR040C SAH1P39954 449 aaKnown RBP3.59□□□□□ -1.83
YIR040CYIR040C DSN1P40568 576 aa3.59□□□□□ -1.83
YIR040CYIR040C YRB1P41920 201 aaKnown RBP3.59□□□□□ -1.83
YIR040CYIR040C GUS1P46655 708 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
YIR040CYIR040C SPT20P50875 604 aa3.59□□□□□ -1.83
YIR040CYIR040C NUP84P52891 726 aa3.59□□□□□ -1.83
YIR040CYIR040C EAF7P53911 425 aaKnown RBP3.59□□□□□ -1.83
YIR040CYIR040C RRN11Q04712 507 aa3.59□□□□□ -1.83
YIR040CYIR040C YLH47Q06493 454 aa3.59□□□□□ -1.83
YIR040CYIR040C SLX4Q12098 748 aa3.59□□□□□ -1.83
YIR040CYIR040C PRE10P21242 288 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
YIR040CYIR040C GRX1P25373 110 aaKnown RBP3.58□□□□□ -1.84
YIR040CYIR040C CDC20P26309 610 aa3.58□□□□□ -1.84
YIR040CYIR040C MRE11P32829 692 aa3.58□□□□□ -1.84
YIR040CYIR040C MRP8P35719 219 aa3.58□□□□□ -1.84
YIR040CYIR040C YKL050CP35736 922 aa3.58□□□□□ -1.84
YIR040CYIR040C MIC60P36112 540 aa3.58□□□□□ -1.84
YIR040CYIR040C FUI1P38196 639 aa3.58□□□□□ -1.84
YIR040CYIR040C YBR184WP38299 523 aa3.58□□□□□ -1.84
YIR040CYIR040C PEX18P38855 283 aa3.58□□□□□ -1.84
YIR040CYIR040C YAP1801P38856 637 aa3.58□□□□□ -1.84
YIR040CYIR040C SPT8P38915 602 aa3.58□□□□□ -1.84
YIR040CYIR040C FTR1P40088 404 aa3.58□□□□□ -1.84
YIR040CYIR040C IAH1P41734 238 aa3.58□□□□□ -1.84
YIR040CYIR040C YJR142WP47173 342 aa3.58□□□□□ -1.84
YIR040CYIR040C GCV2P49095 1034 aa3.58□□□□□ -1.84
YIR040CYIR040C HOP2P53187 214 aa3.58□□□□□ -1.84
YIR040CYIR040C GTF1P53260 183 aaPredicted RBP3.58□□□□□ -1.84
YIR040CYIR040C SDA1P53313 767 aaKnown RBP3.58□□□□□ -1.84
YIR040CYIR040C ALG12P53730 551 aa3.58□□□□□ -1.84
YIR040CYIR040C SFB2P53953 876 aa3.58□□□□□ -1.84
YIR040CYIR040C ERO1Q03103 563 aa3.58□□□□□ -1.84
YIR040CYIR040C SNZ1Q03148 297 aa3.58□□□□□ -1.84
YIR040CYIR040C SRT1Q03175 343 aa3.58□□□□□ -1.84
YIR040CYIR040C ATG16Q03818 150 aa3.58□□□□□ -1.84
YIR040CYIR040C RNH1Q04740 348 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms