RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W SSB1P11484 613 aaKnown RBP7.45□□□□□ -1.22
APE4YHR113W PRR1P28708 518 aa7.45□□□□□ -1.22
APE4YHR113W NIP100P33420 868 aa7.45□□□□□ -1.22
APE4YHR113W MRX3P38172 270 aa7.45□□□□□ -1.22
APE4YHR113W KIC1P38692 1080 aa7.45□□□□□ -1.22
APE4YHR113W MIP6P38760 659 aaKnown RBP7.45□□□□□ -1.22
APE4YHR113W CTM1P38818 585 aa7.45□□□□□ -1.22
APE4YHR113W SSB2P40150 613 aaKnown RBP7.45□□□□□ -1.22
APE4YHR113W ESL1P40456 1118 aa7.45□□□□□ -1.22
APE4YHR113W ALG11P53954 548 aaKnown RBP7.45□□□□□ -1.22
APE4YHR113W RGA2Q06407 1009 aa7.45□□□□□ -1.22
APE4YHR113W RPS6AP0CX37 236 aaKnown RBP7.44□□□□□ -1.22
APE4YHR113W RPS6BP0CX38 236 aaPredicted RBP7.44□□□□□ -1.22
APE4YHR113W HEL1P36113 551 aa7.44□□□□□ -1.22
APE4YHR113W ATH1P48016 1211 aa7.44□□□□□ -1.22
APE4YHR113W PUS1Q12211 544 aaKnown RBP7.44□□□□□ -1.22
APE4YHR113W AHC1Q12433 566 aa7.44□□□□□ -1.22
APE4YHR113W ASP3-2P0CX77 362 aa7.43□□□□□ -1.22
APE4YHR113W ASP3-3P0CX78 362 aa7.43□□□□□ -1.22
APE4YHR113W ASP3-4P0CX79 362 aa7.43□□□□□ -1.22
APE4YHR113W ASP3-1P0CZ17 362 aa7.43□□□□□ -1.22
APE4YHR113W GUT1P32190 709 aa7.43□□□□□ -1.22
APE4YHR113W SWI3P32591 825 aa7.43□□□□□ -1.22
APE4YHR113W MNR2P35724 969 aa7.43□□□□□ -1.22
APE4YHR113W UBX7P38349 436 aa7.43□□□□□ -1.22
APE4YHR113W MSC7P38694 644 aa7.43□□□□□ -1.22
APE4YHR113W YHL026CP38740 315 aa7.43□□□□□ -1.22
APE4YHR113W FTR1P40088 404 aa7.43□□□□□ -1.22
APE4YHR113W NUP42P49686 430 aaKnown RBP7.43□□□□□ -1.22
APE4YHR113W SKY1Q03656 742 aa7.43□□□□□ -1.22
APE4YHR113W YLR287CQ05881 355 aa7.43□□□□□ -1.22
APE4YHR113W FAL1Q12099 399 aaKnown RBP7.43□□□□□ -1.22
APE4YHR113W YOR022CQ12204 715 aa7.43□□□□□ -1.22
APE4YHR113W UBR2Q07963 1872 aa7.43□□□□□ -1.22
APE4YHR113W CIT2P08679 460 aa7.43□□□□□ -1.22
APE4YHR113W RPT1P33299 467 aaKnown RBP7.43□□□□□ -1.22
APE4YHR113W SHM1P37292 490 aaPredicted RBP7.43□□□□□ -1.22
APE4YHR113W RTT107P38850 1070 aa7.43□□□□□ -1.22
APE4YHR113W JHD1P40034 492 aa7.43□□□□□ -1.22
APE4YHR113W VPS75P53853 264 aa7.43□□□□□ -1.22
APE4YHR113W YLR297WQ05899 129 aa7.43□□□□□ -1.22
APE4YHR113W YLR455WQ06188 304 aa7.43□□□□□ -1.22
APE4YHR113W YPR078CQ06813 372 aa7.43□□□□□ -1.22
APE4YHR113W DNL4Q08387 944 aaPredicted RBP7.43□□□□□ -1.22
APE4YHR113W RRP6Q12149 733 aaKnown RBP7.43□□□□□ -1.22
APE4YHR113W NAT1P12945 854 aaKnown RBP7.42□□□□□ -1.22
APE4YHR113W RSA4P25382 515 aaKnown RBP7.42□□□□□ -1.22
APE4YHR113W TBS1P38114 1094 aa7.42□□□□□ -1.22
APE4YHR113W YAP1801P38856 637 aa7.42□□□□□ -1.22
APE4YHR113W ULI1P43604 169 aa7.42□□□□□ -1.22
APE4YHR113W RSC8P43609 557 aaKnown RBP7.42□□□□□ -1.22
APE4YHR113W ISM1P48526 1002 aa7.42□□□□□ -1.22
APE4YHR113W STB4P50104 949 aa7.42□□□□□ -1.22
APE4YHR113W MCM6P53091 1017 aaKnown RBP7.42□□□□□ -1.22
APE4YHR113W YGR035CP53222 116 aa7.42□□□□□ -1.22
APE4YHR113W IWR1Q07532 353 aaPredicted RBP7.42□□□□□ -1.22
APE4YHR113W MSD1P15179 658 aaKnown RBP7.41□□□□□ -1.22
APE4YHR113W IME1P21190 360 aa7.41□□□□□ -1.22
APE4YHR113W SPO11P23179 398 aa7.41□□□□□ -1.22
APE4YHR113W RRT12P25381 491 aa7.41□□□□□ -1.22
APE4YHR113W SMC1P32908 1225 aa7.41□□□□□ -1.22
APE4YHR113W XDJ1P39102 459 aa7.41□□□□□ -1.22
APE4YHR113W YER186CP40101 306 aa7.41□□□□□ -1.22
APE4YHR113W SBE2P42223 864 aaKnown RBP7.41□□□□□ -1.22
APE4YHR113W SMC3P47037 1230 aa7.41□□□□□ -1.22
APE4YHR113W CPR7P47103 393 aa7.41□□□□□ -1.22
APE4YHR113W UME1Q03010 460 aa7.41□□□□□ -1.22
APE4YHR113W SNU56Q03782 492 aaKnown RBP7.41□□□□□ -1.22
APE4YHR113W YML082WQ04533 649 aaKnown RBP7.41□□□□□ -1.22
APE4YHR113W CSR1Q06705 408 aaKnown RBP7.41□□□□□ -1.22
APE4YHR113W ESC8Q08119 714 aa7.41□□□□□ -1.22
APE4YHR113W ABP140Q08641 628 aaKnown RBP7.41□□□□□ -1.22
APE4YHR113W SAM3Q08986 587 aa7.41□□□□□ -1.22
APE4YHR113W TIF1P10081 395 aaKnown RBP7.4□□□□□ -1.22
APE4YHR113W ADK2P26364 225 aa7.4□□□□□ -1.22
APE4YHR113W MCM2P29469 868 aa7.4□□□□□ -1.22
APE4YHR113W APN2P38207 520 aa7.4□□□□□ -1.22
APE4YHR113W POA1P38218 177 aa7.4□□□□□ -1.22
APE4YHR113W EFM2P38347 419 aa7.4□□□□□ -1.22
APE4YHR113W VFA1P40080 203 aa7.4□□□□□ -1.22
APE4YHR113W FIG4P42837 879 aa7.4□□□□□ -1.22
APE4YHR113W RPA49Q01080 415 aaPredicted RBP7.4□□□□□ -1.22
APE4YHR113W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
APE4YHR113W EAR1Q03212 550 aa7.4□□□□□ -1.22
APE4YHR113W RCR2Q03446 210 aaKnown RBP7.4□□□□□ -1.22
APE4YHR113W REC8Q12188 680 aa7.4□□□□□ -1.22
APE4YHR113W YDL206WQ12424 762 aa7.4□□□□□ -1.22
APE4YHR113W PRC1P00729 532 aa7.39□□□□□ -1.23
APE4YHR113W MST1P07236 462 aa7.39□□□□□ -1.23
APE4YHR113W PHO13P19881 312 aa7.39□□□□□ -1.23
APE4YHR113W RRP43P25359 394 aaPredicted RBP7.39□□□□□ -1.23
APE4YHR113W CDC11P32458 415 aa7.39□□□□□ -1.23
APE4YHR113W MFT1P33441 392 aaKnown RBP7.39□□□□□ -1.23
APE4YHR113W CCL1P37366 393 aa7.39□□□□□ -1.23
APE4YHR113W YHR054CP38780 354 aa7.39□□□□□ -1.23
APE4YHR113W IES1P43579 692 aa7.39□□□□□ -1.23
APE4YHR113W OSW7P43611 510 aa7.39□□□□□ -1.23
APE4YHR113W HFM1P51979 1187 aa7.39□□□□□ -1.23
APE4YHR113W EEB1Q02891 456 aa7.39□□□□□ -1.23
APE4YHR113W STE20Q03497 939 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms