RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C PTA1Q01329 785 aaPredicted RBP12.74□□□□□ -0.37
SCC4YER147C SPH1Q06160 661 aa12.74□□□□□ -0.37
SCC4YER147C GLC3P32775 704 aa12.74□□□□□ -0.37
SCC4YER147C ATG19P35193 415 aa12.74□□□□□ -0.37
SCC4YER147C NCL1P38205 684 aaKnown RBP12.74□□□□□ -0.37
SCC4YER147C END3P39013 349 aa12.74□□□□□ -0.37
SCC4YER147C YGL039WP53183 348 aaKnown RBP12.74□□□□□ -0.37
SCC4YER147C TAM41P53230 385 aa12.74□□□□□ -0.37
SCC4YER147C RRN6P32786 894 aa12.73□□□□□ -0.37
SCC4YER147C YTA12P40341 825 aa12.73□□□□□ -0.37
SCC4YER147C CLA4P48562 842 aa12.73□□□□□ -0.37
SCC4YER147C ATG16Q03818 150 aa12.73□□□□□ -0.37
SCC4YER147C POL3P15436 1097 aa12.72□□□□□ -0.37
SCC4YER147C DBF4P32325 704 aa12.72□□□□□ -0.37
SCC4YER147C CDC11P32458 415 aa12.72□□□□□ -0.37
SCC4YER147C CTR1P49573 406 aa12.72□□□□□ -0.37
SCC4YER147C HUL5P53119 910 aa12.72□□□□□ -0.37
SCC4YER147C YGR111WP53265 400 aa12.72□□□□□ -0.37
SCC4YER147C PUF3Q07807 879 aaKnown RBP RIP-Chip data12.72□□□□□ -0.37not detected
SCC4YER147C TAF10Q12030 206 aa12.72□□□□□ -0.37
SCC4YER147C NCA2Q12374 616 aa12.72□□□□□ -0.37
SCC4YER147C TY1B-AO13527 1196 aaKnown RBP12.72□□□□□ -0.37
SCC4YER147C PEP5P12868 1029 aa12.72□□□□□ -0.37
SCC4YER147C CAP1P28495 268 aaKnown RBP12.72□□□□□ -0.37
SCC4YER147C VPS35P34110 944 aa12.72□□□□□ -0.37
SCC4YER147C RPC37P36121 282 aa12.72□□□□□ -0.37
SCC4YER147C PBP2P38151 413 aaKnown RBP RIP-Chip data12.72□□□□□ -0.37not detected
SCC4YER147C CDC53Q12018 815 aaKnown RBP12.72□□□□□ -0.37
SCC4YER147C PMR1P13586 950 aa12.71□□□□□ -0.37
SCC4YER147C KAR3P17119 729 aa12.71□□□□□ -0.37
SCC4YER147C ADA2Q02336 434 aa12.71□□□□□ -0.37
SCC4YER147C TAF9Q05027 157 aa12.71□□□□□ -0.37
SCC4YER147C ACM1Q08981 209 aa12.71□□□□□ -0.37
SCC4YER147C SPO16P17122 198 aa12.7□□□□□ -0.38
SCC4YER147C SSD1P24276 1250 aaKnown RBP RIP-Chip data12.7□□□□□ -0.38not detected
SCC4YER147C YBL055CP34220 418 aaPredicted RBP12.7□□□□□ -0.38
SCC4YER147C YML119WQ03208 357 aa12.7□□□□□ -0.38
SCC4YER147C MSG5P38590 489 aa12.7□□□□□ -0.38
SCC4YER147C FET4P40988 552 aa12.7□□□□□ -0.38
SCC4YER147C YDR222WQ04925 415 aa12.7□□□□□ -0.38
SCC4YER147C SVF1Q05515 481 aa12.7□□□□□ -0.38
SCC4YER147C NCR1Q12200 1170 aa12.7□□□□□ -0.38
SCC4YER147C GAL2P13181 574 aa12.69□□□□□ -0.38
SCC4YER147C ARG1P22768 420 aa12.69□□□□□ -0.38
SCC4YER147C DAL2P25335 343 aa12.69□□□□□ -0.38
SCC4YER147C CDC48P25694 835 aaKnown RBP12.69□□□□□ -0.38
SCC4YER147C COT1P32798 439 aa12.69□□□□□ -0.38
SCC4YER147C PIN4P34217 668 aaKnown RBP RIP-Chip data12.69□□□□□ -0.38not detected
SCC4YER147C MCR1P36060 302 aaKnown RBP12.69□□□□□ -0.38
SCC4YER147C VHC1P38329 1120 aa12.69□□□□□ -0.38
SCC4YER147C FAR8Q05040 523 aa12.69□□□□□ -0.38
SCC4YER147C DUS3Q06053 668 aaKnown RBP12.69□□□□□ -0.38
SCC4YER147C NOC3Q07896 663 aaPredicted RBP12.69□□□□□ -0.38
SCC4YER147C ARD1P07347 238 aaPredicted RBP12.68□□□□□ -0.38
SCC4YER147C SRV2P17555 526 aaKnown RBP12.68□□□□□ -0.38
SCC4YER147C PDB1P32473 366 aaKnown RBP12.68□□□□□ -0.38
SCC4YER147C AVT1P47082 602 aa12.68□□□□□ -0.38
SCC4YER147C ATG1P53104 897 aa12.68□□□□□ -0.38
SCC4YER147C SHR3Q02774 210 aa12.68□□□□□ -0.38
SCC4YER147C DUS4Q06063 367 aa12.68□□□□□ -0.38
SCC4YER147C CSR2Q12734 1121 aa12.68□□□□□ -0.38
SCC4YER147C FBP1P09201 348 aa12.68□□□□□ -0.38
SCC4YER147C VMA1P17255 1071 aaKnown RBP12.68□□□□□ -0.38
SCC4YER147C PUF4P25339 888 aaKnown RBP RIP-Chip data12.68□□□□□ -0.38not detected
SCC4YER147C PSE1P32337 1089 aaKnown RBP12.68□□□□□ -0.38
SCC4YER147C SHP1P34223 423 aa12.68□□□□□ -0.38
SCC4YER147C ASG1P40467 964 aa12.68□□□□□ -0.38
SCC4YER147C HSH155P49955 971 aaKnown RBP12.68□□□□□ -0.38
SCC4YER147C UBX5Q06682 500 aa12.68□□□□□ -0.38
SCC4YER147C GPI10P30777 616 aa12.67□□□□□ -0.38
SCC4YER147C CSG2P35206 410 aa12.67□□□□□ -0.38
SCC4YER147C SSP1P38871 571 aa12.67□□□□□ -0.38
SCC4YER147C RGA2Q06407 1009 aa12.67□□□□□ -0.38
SCC4YER147C ISA1Q07821 250 aaPredicted RBP12.67□□□□□ -0.38
SCC4YER147C SMC5Q08204 1093 aa12.67□□□□□ -0.38
SCC4YER147C MPC54Q08550 464 aa12.67□□□□□ -0.38
SCC4YER147C PER1P25625 357 aa12.66□□□□□ -0.38
SCC4YER147C MRX3P38172 270 aa12.66□□□□□ -0.38
SCC4YER147C YBR062CP38239 180 aa12.66□□□□□ -0.38
SCC4YER147C NPP2P39997 493 aa12.66□□□□□ -0.38
SCC4YER147C YJL007CP47080 104 aa12.66□□□□□ -0.38
SCC4YER147C CPR7P47103 393 aa12.66□□□□□ -0.38
SCC4YER147C RPA49Q01080 415 aaPredicted RBP12.66□□□□□ -0.38
SCC4YER147C ROD1Q02805 837 aa12.66□□□□□ -0.38
SCC4YER147C NOB1Q08444 459 aaKnown RBP12.66□□□□□ -0.38
SCC4YER147C CBF2P32504 956 aa12.65□□□□□ -0.38
SCC4YER147C HEK2P38199 381 aaKnown RBP RIP-Chip data12.65□□□□□ -0.38 RIP-Chip
SCC4YER147C TDA10P42938 290 aa12.65□□□□□ -0.38
SCC4YER147C VPS53P47061 822 aa12.65□□□□□ -0.38
SCC4YER147C TBF1Q02457 562 aa12.65□□□□□ -0.38
SCC4YER147C AIM7Q12156 149 aa12.65□□□□□ -0.38
SCC4YER147C SWI3P32591 825 aa12.65□□□□□ -0.38
SCC4YER147C YMR134WP40207 237 aa12.65□□□□□ -0.38
SCC4YER147C PHO86P46956 311 aa12.65□□□□□ -0.38
SCC4YER147C CEF1Q03654 590 aaPredicted RBP12.65□□□□□ -0.38
SCC4YER147C PPM1Q04081 328 aa12.65□□□□□ -0.38
SCC4YER147C ERV41Q04651 352 aa12.65□□□□□ -0.38
SCC4YER147C IWR1Q07532 353 aaPredicted RBP12.65□□□□□ -0.38
SCC4YER147C CMS1Q07897 291 aaKnown RBP12.65□□□□□ -0.38
SCC4YER147C RPS3P05750 240 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 153.2 ms