RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W DBP1P24784 617 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W SWI4P25302 1093 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W SEC20P28791 383 aa2.52□□□□□ -2.01
SPF1YEL031W ZIP1P31111 875 aa2.52□□□□□ -2.01
SPF1YEL031W TFC4P33339 1025 aa2.52□□□□□ -2.01
SPF1YEL031W NUP120P35729 1037 aa2.52□□□□□ -2.01
SPF1YEL031W YKR078WP36158 585 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W MAL31P38156 614 aa2.52□□□□□ -2.01
SPF1YEL031W FMS1P50264 508 aa2.52□□□□□ -2.01
SPF1YEL031W ATF2P53296 535 aa2.52□□□□□ -2.01
SPF1YEL031W PGA2P53903 129 aa2.52□□□□□ -2.01
SPF1YEL031W UTP6Q02354 440 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W SYH1Q02875 849 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W YMR018WQ04364 514 aa2.52□□□□□ -2.01
SPF1YEL031W YAP7Q08182 245 aa2.52□□□□□ -2.01
SPF1YEL031W GPR1Q12361 961 aa2.52□□□□□ -2.01
SPF1YEL031W NHA1Q99271 985 aa2.52□□□□□ -2.01
SPF1YEL031W RIM15P43565 1770 aa2.52□□□□□ -2.01
SPF1YEL031W CMD1P06787 147 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W PPR1P07272 904 aaPredicted RBP2.51□□□□□ -2.01
SPF1YEL031W SSB1P11484 613 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W FAR1P21268 830 aa2.51□□□□□ -2.01
SPF1YEL031W PDC6P26263 563 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W PAP1P29468 568 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W KES1P35844 434 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W TIF5P38431 405 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W HXT6P39003 570 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W HXT7P39004 570 aa2.51□□□□□ -2.01
SPF1YEL031W PES4P39684 611 aa2.51□□□□□ -2.01
SPF1YEL031W BIM1P40013 344 aa2.51□□□□□ -2.01
SPF1YEL031W SSB2P40150 613 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W IOC3P43596 787 aa2.51□□□□□ -2.01
SPF1YEL031W MDM1Q01846 1127 aa2.51□□□□□ -2.01
SPF1YEL031W FMP30Q02883 468 aa2.51□□□□□ -2.01
SPF1YEL031W MTG1Q03151 367 aaPredicted RBP2.51□□□□□ -2.01
SPF1YEL031W PLP1Q04004 230 aa2.51□□□□□ -2.01
SPF1YEL031W URC2Q04411 772 aa2.51□□□□□ -2.01
SPF1YEL031W FUS2Q05670 677 aa2.51□□□□□ -2.01
SPF1YEL031W YDL114WQ07530 308 aa2.51□□□□□ -2.01
SPF1YEL031W CLF1Q12309 687 aaPredicted RBP2.51□□□□□ -2.01
SPF1YEL031W EMP46Q12396 444 aa2.51□□□□□ -2.01
SPF1YEL031W ATG11Q12527 1178 aa2.51□□□□□ -2.01
SPF1YEL031W FOB1O13329 566 aa2.51□□□□□ -2.01
SPF1YEL031W VMA8P32610 256 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W DOM34P33309 386 aa2.51□□□□□ -2.01
SPF1YEL031W SET3P36124 751 aa2.51□□□□□ -2.01
SPF1YEL031W YHB1P39676 399 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W FRT2P39734 528 aa2.51□□□□□ -2.01
SPF1YEL031W SAH1P39954 449 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W FCY21P40039 528 aa2.51□□□□□ -2.01
SPF1YEL031W ATG32P40458 529 aa2.51□□□□□ -2.01
SPF1YEL031W AIM21P40563 679 aa2.51□□□□□ -2.01
SPF1YEL031W SWP82P43554 623 aa2.51□□□□□ -2.01
SPF1YEL031W IES1P43579 692 aa2.51□□□□□ -2.01
SPF1YEL031W YJL055WP47044 245 aa2.51□□□□□ -2.01
SPF1YEL031W BNI4P53858 892 aa2.51□□□□□ -2.01
SPF1YEL031W RPT6Q01939 405 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W YDR090CQ03193 310 aa2.51□□□□□ -2.01
SPF1YEL031W RMT2Q03305 412 aa2.51□□□□□ -2.01
SPF1YEL031W USA1Q03714 838 aa2.51□□□□□ -2.01
SPF1YEL031W SXM1Q04175 944 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W YML082WQ04533 649 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W ENT2Q05785 613 aa2.51□□□□□ -2.01
SPF1YEL031W BCP1Q06338 283 aa2.51□□□□□ -2.01
SPF1YEL031W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SPF1YEL031W YOR238WQ08634 303 aa2.51□□□□□ -2.01
SPF1YEL031W AIM41Q12032 185 aa2.51□□□□□ -2.01
SPF1YEL031W PGA3Q12746 312 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W ENO2P00925 437 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W KSS1P14681 368 aa2.51□□□□□ -2.01
SPF1YEL031W CKA2P19454 339 aa2.51□□□□□ -2.01
SPF1YEL031W CNA1P23287 553 aa2.51□□□□□ -2.01
SPF1YEL031W HSP30P25619 332 aa2.51□□□□□ -2.01
SPF1YEL031W SEC21P32074 935 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W SEC6P32844 805 aa2.51□□□□□ -2.01
SPF1YEL031W RER2P35196 286 aa2.51□□□□□ -2.01
SPF1YEL031W YBR242WP38331 238 aa2.51□□□□□ -2.01
SPF1YEL031W SSZ1P38788 538 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W SMX2P40204 77 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W YIR042CP40586 236 aa2.51□□□□□ -2.01
SPF1YEL031W EPL1P43572 832 aa2.51□□□□□ -2.01
SPF1YEL031W AIP1P46680 615 aaKnown RBP2.51□□□□□ -2.01
SPF1YEL031W ULP1Q02724 621 aa2.51□□□□□ -2.01
SPF1YEL031W RPM2Q02773 1202 aa2.51□□□□□ -2.01
SPF1YEL031W SYO1Q07395 620 aa2.51□□□□□ -2.01
SPF1YEL031W ATP16Q12165 160 aa2.51□□□□□ -2.01
SPF1YEL031W RRP36Q12481 300 aaPredicted RBP2.51□□□□□ -2.01
SPF1YEL031W YPT6Q99260 215 aa2.51□□□□□ -2.01
SPF1YEL031W SSK22P25390 1331 aaPredicted RBP2.5□□□□□ -2.01
SPF1YEL031W PGK1P00560 416 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W YML002WP0CF17 737 aa2.5□□□□□ -2.01
SPF1YEL031W SSC1P0CS90 654 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W PYC1P11154 1178 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W RET1P22276 1149 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W SSE2P32590 693 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W PET112P33893 541 aa2.5□□□□□ -2.01
SPF1YEL031W MRPL40P36534 297 aa2.5□□□□□ -2.01
SPF1YEL031W TBS1P38114 1094 aa2.5□□□□□ -2.01
SPF1YEL031W ECM2P38241 364 aaKnown RBP2.5□□□□□ -2.01
SPF1YEL031W RXT2P38255 430 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms