RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	SPC72	P39723	622 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	VFA1	P40080	203 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	YER156C	P40093	338 aa	Known RBP	3.58	□□□□□ -1.84
PSF1	YDR013W	ENV11	P53246	860 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	RET3	P53600	189 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	CPR6	P53691	371 aa	Known RBP	3.58	□□□□□ -1.84
PSF1	YDR013W	SEC5	P89102	971 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	ECM23	Q02710	187 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	BUL2	Q03758	920 aa	Known RBP	3.58	□□□□□ -1.84
PSF1	YDR013W	MYO5	Q04439	1219 aa	Known RBP	3.58	□□□□□ -1.84
PSF1	YDR013W	CSR1	Q06705	408 aa	Known RBP	3.58	□□□□□ -1.84
PSF1	YDR013W	YLR001C	Q07895	862 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	MLH2	Q07980	695 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	DSE3	Q08729	430 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	CWC2	Q12046	339 aa	Predicted RBP	3.58	□□□□□ -1.84
PSF1	YDR013W	MED1	Q12321	566 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	YRF1-3	P0CX14	1859 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	YRF1-7	P0CX15	1859 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	YRF1-6	P53819	1859 aa		3.58	□□□□□ -1.84
PSF1	YDR013W	TRP3	P00937	484 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	RPS31	P05759	152 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	CHS2	P14180	963 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	GFA1	P14742	717 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	PFK1	P16861	987 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	RET1	P22276	1149 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	SPO11	P23179	398 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
PSF1	YDR013W	YKL023W	P36103	277 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	YKR073C	P36153	106 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	PGM2	P37012	569 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	UBP13	P38187	747 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	TOS1	P38288	455 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	SUL1	P38359	859 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	PIH1	P38768	344 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	RIX1	P38883	763 aa	Predicted RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	SMF1	P38925	575 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	SAK1	P38990	1142 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	DAK2	P43550	591 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	CIT3	P43635	486 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	ATG36	P46983	293 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	FMS1	P50264	508 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	GUP1	P53154	560 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	YGR130C	P53278	816 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	TRM44	Q02648	567 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	OYE2	Q03558	400 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	SOV1	Q04748	898 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	STE23	Q06010	1027 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	TUS1	Q06412	1307 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	UTP4	Q06679	776 aa	Known RBP	3.57	□□□□□ -1.84
PSF1	YDR013W	GAS5	Q08193	484 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	YOL075C	Q08234	1294 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	PCL8	Q08966	492 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	NHA1	Q99271	985 aa		3.57	□□□□□ -1.84
PSF1	YDR013W	FOB1	O13329	566 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	SAM2	P19358	384 aa	Known RBP	3.56	□□□□□ -1.84
PSF1	YDR013W	DBP5	P20449	482 aa	Known RBP	3.56	□□□□□ -1.84
PSF1	YDR013W	RAD53	P22216	821 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	CHS3	P29465	1165 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	CCL1	P37366	393 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	ISW1	P38144	1129 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	ALG14	P38242	237 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	TIF5	P38431	405 aa	Known RBP	3.56	□□□□□ -1.84
PSF1	YDR013W	GAA1	P39012	614 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	BUD16	P39988	312 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	ATG32	P40458	529 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	LYS14	P40971	790 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	AIP1	P46680	615 aa	Known RBP	3.56	□□□□□ -1.84
PSF1	YDR013W	YGR153W	P48238	217 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	VPS4	P52917	437 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	YGL140C	P53120	1219 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	YMR018W	Q04364	514 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	VHS3	Q08438	674 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	NUR1	Q12066	484 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	RIO1	Q12196	484 aa	Known RBP	3.56	□□□□□ -1.84
PSF1	YDR013W	SEY1	Q99287	776 aa		3.56	□□□□□ -1.84
PSF1	YDR013W	CTT1	P06115	562 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	RPB2	P08518	1224 aa	Known RBP	3.55	□□□□□ -1.84
PSF1	YDR013W	SRD1	P09007	221 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	SNF3	P10870	884 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	GAL2	P13181	574 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	POL3	P15436	1097 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	KAR3	P17119	729 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
PSF1	YDR013W	STE11	P23561	717 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	RAD57	P25301	460 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	ISF1	P32488	338 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	SSE1	P32589	693 aa	Known RBP	3.55	□□□□□ -1.84
PSF1	YDR013W	SEC8	P32855	1065 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	YKL050C	P35736	922 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	MCD4	P36051	919 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	YKR018C	P36114	725 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	ERG7	P38604	731 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	CCT2	P39076	527 aa	Known RBP	3.55	□□□□□ -1.84
PSF1	YDR013W	SLX8	P40072	274 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	INA22	P40576	216 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	HUL4	P40985	892 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	MIC19	P43594	170 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	TRS85	P46944	698 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	KAP114	P53067	1004 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	VID30	P53076	958 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms