RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	RCM1	P53972	490 aa		5.77	□□□□□ -1.49
SMP1	YBR182C	ECM9	Q02202	377 aa		5.77	□□□□□ -1.49
SMP1	YBR182C	YDR338C	Q05497	695 aa		5.77	□□□□□ -1.49
SMP1	YBR182C	OPY2	Q06810	360 aa		5.77	□□□□□ -1.49
SMP1	YBR182C	NEW1	Q08972	1196 aa	Known RBP	5.77	□□□□□ -1.49
SMP1	YBR182C	CHS3	P29465	1165 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	YKU70	P32807	602 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	NFU1	P32860	256 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	WHI3	P34761	661 aa	Known RBP	5.76	□□□□□ -1.49
SMP1	YBR182C	BLI1	P35727	113 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	POL12	P38121	705 aa	Predicted RBP	5.76	□□□□□ -1.49
SMP1	YBR182C	HSL7	P38274	827 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	TMA108	P40462	946 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	MNT3	P40549	630 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	YGR045C	P53229	120 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	PTA1	Q01329	785 aa	Predicted RBP	5.76	□□□□□ -1.49
SMP1	YBR182C	RSA3	Q05942	220 aa	Known RBP	5.76	□□□□□ -1.49
SMP1	YBR182C	SSP2	Q08646	371 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	ALG6	Q12001	544 aa	Known RBP	5.76	□□□□□ -1.49
SMP1	YBR182C	YPR027C	Q12079	277 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	YOL087C	Q99247	1116 aa		5.76	□□□□□ -1.49
SMP1	YBR182C	MSS18	P08593	268 aa		5.75	□□□□□ -1.49
SMP1	YBR182C	RPN3	P40016	523 aa	Known RBP	5.75	□□□□□ -1.49
SMP1	YBR182C	GYP7	P48365	746 aa		5.75	□□□□□ -1.49
SMP1	YBR182C	VPS30	Q02948	557 aa		5.75	□□□□□ -1.49
SMP1	YBR182C	YMR018W	Q04364	514 aa		5.75	□□□□□ -1.49
SMP1	YBR182C	HRQ1	Q05549	1077 aa		5.75	□□□□□ -1.49
SMP1	YBR182C	YLL058W	Q12198	575 aa		5.75	□□□□□ -1.49
SMP1	YBR182C	FOB1	O13329	566 aa		5.74	□□□□□ -1.49
SMP1	YBR182C	GCD1	P09032	578 aa	Predicted RBP	5.74	□□□□□ -1.49
SMP1	YBR182C	CCR4	P31384	837 aa	Known RBP	5.74	□□□□□ -1.49
SMP1	YBR182C	MCM10	P32354	571 aa		5.74	□□□□□ -1.49
SMP1	YBR182C	SLA2	P33338	968 aa		5.74	□□□□□ -1.49
SMP1	YBR182C	UBP5	P39944	805 aa		5.74	□□□□□ -1.49
SMP1	YBR182C	QRI7	P43122	407 aa		5.74	□□□□□ -1.49
SMP1	YBR182C	ALY2	P47029	1046 aa		5.74	□□□□□ -1.49
SMP1	YBR182C	ECL1	P48235	211 aa		5.74	□□□□□ -1.49
SMP1	YBR182C	CNM67	P53865	581 aa	Known RBP	5.74	□□□□□ -1.49
SMP1	YBR182C	CDC48	P25694	835 aa	Known RBP	5.73	□□□□□ -1.49
SMP1	YBR182C	APL2	P36000	726 aa	Predicted RBP	5.73	□□□□□ -1.49
SMP1	YBR182C	YKL151C	P36059	337 aa		5.73	□□□□□ -1.49
SMP1	YBR182C	TSL1	P38427	1098 aa	Known RBP	5.73	□□□□□ -1.49
SMP1	YBR182C	ELA1	P53861	379 aa	Predicted RBP	5.73	□□□□□ -1.49
SMP1	YBR182C	SPC19	Q03954	165 aa		5.73	□□□□□ -1.49
SMP1	YBR182C	YHM2	Q04013	314 aa		5.73	□□□□□ -1.49
SMP1	YBR182C	CDC31	P06704	161 aa	Known RBP	5.72	□□□□□ -1.49
SMP1	YBR182C	RPS4A	P0CX35	261 aa	Known RBP	5.72	□□□□□ -1.49
SMP1	YBR182C	RPS4B	P0CX36	261 aa	Known RBP	5.72	□□□□□ -1.49
SMP1	YBR182C	HCA4	P20448	770 aa	Known RBP	5.72	□□□□□ -1.49
SMP1	YBR182C	MSM1	P22438	575 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	MSH1	P25846	959 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	UGA2	P38067	497 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	GPB2	P39717	880 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	NDE1	P40215	560 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	NPY1	P53164	384 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	HFI1	Q12060	488 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	SSM4	P40318	1319 aa		5.72	□□□□□ -1.49
SMP1	YBR182C	RER1	P25560	188 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	IMP2'	P32351	346 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	PET309	P32522	965 aa	Predicted RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	TOA1	P32773	286 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	BEM3	P32873	1128 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	SEG2	P34250	1132 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	NNK1	P36003	928 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	HXT6	P39003	570 aa	Known RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	HXT7	P39004	570 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	YER158C	P40095	573 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	RLP7	P40693	322 aa	Known RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	UBC9	P50623	157 aa	Predicted RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	NOG2	P53742	486 aa	Known RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	HOS3	Q02959	697 aa	Known RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	TRS130	Q03660	1102 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	BLS1	Q06071	122 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	YLR257W	Q06146	321 aa	Known RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	HRK1	Q08732	759 aa	Known RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	CLF1	Q12309	687 aa	Predicted RBP	5.71	□□□□□ -1.5
SMP1	YBR182C	MED1	Q12321	566 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	YOL114C	Q12322	202 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	APM4	Q99186	491 aa		5.71	□□□□□ -1.5
SMP1	YBR182C	RPS21A	P0C0V8	87 aa	Known RBP	5.7	□□□□□ -1.5
SMP1	YBR182C	DAL7	P21826	554 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	RNQ1	P25367	405 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	TFC3	P34111	1160 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	BFA1	P47113	574 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	BNA2	P47125	453 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	RNR4	P49723	345 aa	Known RBP	5.7	□□□□□ -1.5
SMP1	YBR182C	PRP43	P53131	767 aa	Known RBP	5.7	□□□□□ -1.5
SMP1	YBR182C	HOL1	P53389	586 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	GTR1	Q00582	310 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	ECM38	Q05902	660 aa	Predicted RBP	5.7	□□□□□ -1.5
SMP1	YBR182C	MDM38	Q08179	573 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	YDR056C	Q12025	205 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	DFG16	Q99234	619 aa		5.7	□□□□□ -1.5
SMP1	YBR182C	DIF1	O13577	133 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	SEC18	P18759	758 aa	Known RBP	5.69	□□□□□ -1.5
SMP1	YBR182C	RFA1	P22336	621 aa	Known RBP	5.69	□□□□□ -1.5
SMP1	YBR182C	ADP1	P25371	1049 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	LRG1	P35688	1017 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	MAL31	P38156	614 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	PSY4	P38193	441 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 31 ms