RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W EFT1P32324 842 aaKnown RBP7.59□□□□□ -1.2
TOD6YBL054W SLA2P33338 968 aa7.59□□□□□ -1.2
TOD6YBL054W CCT3P39077 534 aaKnown RBP7.59□□□□□ -1.2
TOD6YBL054W FMS1P50264 508 aa7.59□□□□□ -1.2
TOD6YBL054W UBP2Q01476 1272 aa7.59□□□□□ -1.2
TOD6YBL054W MTG1Q03151 367 aaPredicted RBP7.59□□□□□ -1.2
TOD6YBL054W KRE28Q04431 385 aa7.59□□□□□ -1.2
TOD6YBL054W YLH47Q06493 454 aa7.59□□□□□ -1.2
TOD6YBL054W DSE3Q08729 430 aa7.59□□□□□ -1.2
TOD6YBL054W TCO89Q08921 799 aa7.59□□□□□ -1.2
TOD6YBL054W CDC53Q12018 815 aaKnown RBP7.59□□□□□ -1.2
TOD6YBL054W RPL8BP29453 256 aaKnown RBP7.58□□□□□ -1.2
TOD6YBL054W MDL2P33311 773 aa7.58□□□□□ -1.2
TOD6YBL054W YKR023WP36119 530 aaKnown RBP7.58□□□□□ -1.2
TOD6YBL054W VHC1P38329 1120 aa7.58□□□□□ -1.2
TOD6YBL054W RRT2P38332 387 aa7.58□□□□□ -1.2
TOD6YBL054W MSG5P38590 489 aa7.58□□□□□ -1.2
TOD6YBL054W END3P39013 349 aa7.58□□□□□ -1.2
TOD6YBL054W PSY2P40164 858 aa7.58□□□□□ -1.2
TOD6YBL054W PDS1P40316 373 aaPredicted RBP7.58□□□□□ -1.2
TOD6YBL054W NOP15P53927 220 aaPredicted RBP7.58□□□□□ -1.2
TOD6YBL054W SFB2P53953 876 aa7.58□□□□□ -1.2
TOD6YBL054W RPM2Q02773 1202 aa7.58□□□□□ -1.2
TOD6YBL054W CSM3Q04659 317 aa7.58□□□□□ -1.2
TOD6YBL054W TRM11Q12463 433 aa7.58□□□□□ -1.2
TOD6YBL054W ADE2P21264 571 aaKnown RBP7.57□□□□□ -1.2
TOD6YBL054W RAM2P29703 316 aa7.57□□□□□ -1.2
TOD6YBL054W EXO84P38261 753 aa7.57□□□□□ -1.2
TOD6YBL054W SPC72P39723 622 aa7.57□□□□□ -1.2
TOD6YBL054W YRB1P41920 201 aaKnown RBP7.57□□□□□ -1.2
TOD6YBL054W FMP33P46998 180 aa7.57□□□□□ -1.2
TOD6YBL054W UBX4P54730 416 aa7.57□□□□□ -1.2
TOD6YBL054W DON1Q05610 365 aa7.57□□□□□ -1.2
TOD6YBL054W YDR278CQ05612 105 aa7.57□□□□□ -1.2
TOD6YBL054W ATG17Q06410 417 aa7.57□□□□□ -1.2
TOD6YBL054W TDA5Q06417 326 aaKnown RBP7.57□□□□□ -1.2
TOD6YBL054W CIR2Q08822 631 aa7.57□□□□□ -1.2
TOD6YBL054W BUG1Q12191 341 aa7.57□□□□□ -1.2
TOD6YBL054W COBP00163 385 aa7.56□□□□□ -1.2
TOD6YBL054W ENO1P00924 437 aaKnown RBP7.56□□□□□ -1.2
TOD6YBL054W MSB1P21339 1137 aaKnown RBP7.56□□□□□ -1.2
TOD6YBL054W GSY1P23337 708 aa7.56□□□□□ -1.2
TOD6YBL054W TRK2P28584 889 aa7.56□□□□□ -1.2
TOD6YBL054W BUD2P33314 1104 aa7.56□□□□□ -1.2
TOD6YBL054W TRM2P33753 639 aa7.56□□□□□ -1.2
TOD6YBL054W AST1P35183 429 aa7.56□□□□□ -1.2
TOD6YBL054W KES1P35844 434 aaKnown RBP7.56□□□□□ -1.2
TOD6YBL054W RBL2P48606 106 aaKnown RBP7.56□□□□□ -1.2
TOD6YBL054W NBP1P52919 319 aaPredicted RBP7.56□□□□□ -1.2
TOD6YBL054W GUP1P53154 560 aa7.56□□□□□ -1.2
TOD6YBL054W COG6P53959 839 aa7.56□□□□□ -1.2
TOD6YBL054W YPL260WQ08977 551 aa7.56□□□□□ -1.2
TOD6YBL054W CHS5Q12114 671 aaKnown RBP7.56□□□□□ -1.2
TOD6YBL054W NYV1Q12255 253 aa7.56□□□□□ -1.2
TOD6YBL054W IES3Q12345 250 aa7.56□□□□□ -1.2
TOD6YBL054W DPH6Q12429 685 aa7.56□□□□□ -1.2
TOD6YBL054W FLO1P32768 1537 aa7.56□□□□□ -1.2
TOD6YBL054W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2 RIP-Chip
TOD6YBL054W SBP1P10080 294 aaKnown RBP7.55□□□□□ -1.2
TOD6YBL054W YAK1P14680 807 aa7.55□□□□□ -1.2
TOD6YBL054W MRPL25P23369 157 aa7.55□□□□□ -1.2
TOD6YBL054W PUF4P25339 888 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
TOD6YBL054W KIP2P28743 706 aa7.55□□□□□ -1.2
TOD6YBL054W YKL023WP36103 277 aaKnown RBP7.55□□□□□ -1.2
TOD6YBL054W STN1P38960 494 aa7.55□□□□□ -1.2
TOD6YBL054W MSN5P52918 1224 aa7.55□□□□□ -1.2
TOD6YBL054W USE1P53146 245 aa7.55□□□□□ -1.2
TOD6YBL054W HMO1Q03973 246 aaKnown RBP7.55□□□□□ -1.2
TOD6YBL054W PPM1Q04081 328 aa7.55□□□□□ -1.2
TOD6YBL054W YLR297WQ05899 129 aa7.55□□□□□ -1.2
TOD6YBL054W NSE1Q07913 336 aa7.55□□□□□ -1.2
TOD6YBL054W VHS3Q08438 674 aa7.55□□□□□ -1.2
TOD6YBL054W FAL1Q12099 399 aaKnown RBP7.55□□□□□ -1.2
TOD6YBL054W TAF3Q12297 353 aa7.55□□□□□ -1.2
TOD6YBL054W MED1Q12321 566 aa7.55□□□□□ -1.2
TOD6YBL054W THS1P04801 734 aaKnown RBP7.54□□□□□ -1.2
TOD6YBL054W HEM15P16622 393 aa7.54□□□□□ -1.2
TOD6YBL054W CBF1P17106 351 aa7.54□□□□□ -1.2
TOD6YBL054W RIB7P33312 244 aa7.54□□□□□ -1.2
TOD6YBL054W MRP8P35719 219 aa7.54□□□□□ -1.2
TOD6YBL054W HES1P35843 434 aa7.54□□□□□ -1.2
TOD6YBL054W YKR078WP36158 585 aaKnown RBP7.54□□□□□ -1.2
TOD6YBL054W SRL3P36167 246 aa7.54□□□□□ -1.2
TOD6YBL054W STB1P42845 420 aa7.54□□□□□ -1.2
TOD6YBL054W PIP2P52960 996 aa7.54□□□□□ -1.2
TOD6YBL054W TEL2P53038 688 aa7.54□□□□□ -1.2
TOD6YBL054W DRN1P53255 507 aaKnown RBP7.54□□□□□ -1.2
TOD6YBL054W ESBP6P53918 673 aa7.54□□□□□ -1.2
TOD6YBL054W OSH6Q02201 448 aa7.54□□□□□ -1.2
TOD6YBL054W ACL4Q03771 387 aa7.54□□□□□ -1.2
TOD6YBL054W YML082WQ04533 649 aaKnown RBP7.54□□□□□ -1.2
TOD6YBL054W VIK1Q12045 647 aa7.54□□□□□ -1.2
TOD6YBL054W MSH5Q12175 901 aa7.54□□□□□ -1.2
TOD6YBL054W GCR1P07261 785 aa7.54□□□□□ -1.2
TOD6YBL054W URA4P20051 364 aa7.54□□□□□ -1.2
TOD6YBL054W REB1P21538 810 aa7.54□□□□□ -1.2
TOD6YBL054W DPB2P24482 689 aaPredicted RBP7.54□□□□□ -1.2
TOD6YBL054W MRM1P25270 412 aa7.54□□□□□ -1.2
TOD6YBL054W CAP1P28495 268 aaKnown RBP7.54□□□□□ -1.2
TOD6YBL054W CCL1P37366 393 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms