RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Triml2E9PW10 424 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Hmx1O70218 332 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 CalcaP70160 136 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 C1qtnf12Q8R2Z0 308 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Amotl1Q9D4H4 968 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Dhx8A2A4P0 1244 aaKnown RBP13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Znf568E9PYI1 671 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 TrdnE9Q9K5 693 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ddx46Q569Z5 1032 aaKnown RBP13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Klra3Q64329 266 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Zc3h6Q8BYK8 1177 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Sirt1Q923E4 737 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Cep89Q9CZX2 791 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Rsph10bE9PYQ0 876 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Lrrc6O88978 473 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Trim27Q62158 513 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Cgnl1Q6AW69 1298 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 ChmQ9QXG2 665 aa13.35□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Mctp1E9PV86 951 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Cd22P35329 862 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Traf1P39428 409 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Erc2Q6PH08 957 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Fam76aQ922G2 307 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Pik3c2bE9QAN8 1632 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Klhl34A2AI76 644 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ccdc33Q3ULW6 985 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Zfp446Q8C9M8 523 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Tshz3Q8CGV9 1081 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 TxlnbQ8VBT1 685 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Klra9Q2TJJ8 266 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Cfap100Q80VN0 613 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Erlin2Q8BFZ9 340 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 HnrnpuQ8VEK3 800 aaKnown RBP13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 FanclQ9CR14 375 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 TnmdQ9EP64 317 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Klra10Q9R1G6 266 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Atp1a4Q9WV27 1032 aa13.34□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Cps1Q8C196 1500 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Hnrnph1O35737 449 aaKnown RBP13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Evi5P97366 809 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Aifm3Q3TY86 605 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ktn1Q61595 1327 aaKnown RBP13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Wdr33Q8K4P0 1330 aaKnown RBP13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Cplx2P84086 134 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Sh3gl3Q62421 347 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Vil1Q62468 827 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Maats1Q8BRC6 783 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Nckap5lQ6GQX2 1323 aa13.33□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Pde11aP0C1Q2 933 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Prim1P20664 417 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ccne1Q61457 408 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Cct8l1Q80YT3 562 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Dnaaf2Q8BPI1 814 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ttc27Q8CD92 847 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 DpydQ8CHR6 1025 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Smarca5Q91ZW3 1051 aaKnown RBP13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Nfu1Q9QZ23 255 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Klhl33G3UW92 533 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Snap23O09044 210 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Hnrnph2P70333 449 aaKnown RBP13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Slu7Q8BHJ9 585 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 AnlnQ8K298 1121 aaKnown RBP13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Brms1Q99N20 246 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Znf335A2A5K6 1337 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ubn2Q80WC1 1314 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Tbc1d2B1AVH7 922 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Exoc3l2D3YUP5 789 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Tmem165P52875 323 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Trim25Q61510 634 aaKnown RBP13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Flad1Q8R123 492 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Dnaaf4Q8R368 420 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Cbx8Q9QXV1 362 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Slit3Q9WVB4 1523 aa13.32□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Q3TQI7 289 aaKnown RBP13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Znf697Q569E7 569 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 IqcgQ80W32 419 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Smc1bQ920F6 1248 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Nlgn1Q99K10 843 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 LlphQ9D945 130 aaKnown RBP13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Stx6Q9JKK1 255 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Chd4Q6PDQ2 1915 aaKnown RBP13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Tmem94Q7TSH8 1360 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ccdc114Q3UX62 658 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ctnna3Q65CL1 895 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Exoc8Q6PGF7 716 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Rab11fip3Q8CHD8 1047 aa13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ipo7Q9EPL8 1038 aaKnown RBP13.31□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Frmpd2A0A140LI67 1392 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Ccdc112A0AUP1 442 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 1700006A11RikB9EHI3 544 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Eya1P97767 591 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 NeblQ0II04 452 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 KinQ8K339 391 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Kif1aP33173 1695 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Hsp90b1P08113 802 aaKnown RBP13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Chpf2Q3UU43 768 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Evc2Q8K1G2 1220 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Usp48Q3V0C5 1052 aa13.3□□□□□ -0.28
Ssh1-201ENSMUST00000077689 Q66JV7 365 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms