RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W YKL107WP34251 309 aa3.55□□□□□ -1.84
ROX1YPR065W SAH1P39954 449 aaKnown RBP3.55□□□□□ -1.84
ROX1YPR065W GAT1P43574 510 aa3.55□□□□□ -1.84
ROX1YPR065W PUS2P53167 370 aa3.55□□□□□ -1.84
ROX1YPR065W SRP1Q02821 542 aaKnown RBP3.55□□□□□ -1.84
ROX1YPR065W DUT1P33317 147 aa3.54□□□□□ -1.84
ROX1YPR065W PET112P33893 541 aa3.54□□□□□ -1.84
ROX1YPR065W PCL5P38794 229 aa3.54□□□□□ -1.84
ROX1YPR065W YGL176CP46945 554 aa3.54□□□□□ -1.84
ROX1YPR065W GYP7P48365 746 aa3.54□□□□□ -1.84
ROX1YPR065W DAM1P53267 343 aa3.54□□□□□ -1.84
ROX1YPR065W SPO20Q04359 397 aa3.54□□□□□ -1.84
ROX1YPR065W MRI1Q06489 411 aaKnown RBP3.54□□□□□ -1.84
ROX1YPR065W FBP1P09201 348 aa3.53□□□□□ -1.84
ROX1YPR065W PIN4P34217 668 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
ROX1YPR065W MOT2P34909 587 aaKnown RBP3.53□□□□□ -1.84
ROX1YPR065W MNR2P35724 969 aa3.53□□□□□ -1.84
ROX1YPR065W YKR078WP36158 585 aaKnown RBP3.53□□□□□ -1.84
ROX1YPR065W MET10P39692 1035 aa3.53□□□□□ -1.84
ROX1YPR065W KRI1P42846 591 aaKnown RBP3.53□□□□□ -1.84
ROX1YPR065W AMA1P50082 593 aa3.53□□□□□ -1.84
ROX1YPR065W MRPS35P53292 345 aa3.53□□□□□ -1.84
ROX1YPR065W SFB2P53953 876 aa3.53□□□□□ -1.84
ROX1YPR065W EEB1Q02891 456 aa3.53□□□□□ -1.84
ROX1YPR065W YPL066WQ12194 479 aa3.53□□□□□ -1.84
ROX1YPR065W SWM1Q12379 170 aa3.53□□□□□ -1.84
ROX1YPR065W RPN13O13563 156 aa3.52□□□□□ -1.85
ROX1YPR065W SPO11P23179 398 aa3.52□□□□□ -1.85
ROX1YPR065W SDP1P40479 209 aa3.52□□□□□ -1.85
ROX1YPR065W OYE2Q03558 400 aaKnown RBP3.52□□□□□ -1.85
ROX1YPR065W NPP2P39997 493 aa3.51□□□□□ -1.85
ROX1YPR065W YJL163CP46996 555 aa3.51□□□□□ -1.85
ROX1YPR065W MUP1P50276 574 aa3.51□□□□□ -1.85
ROX1YPR065W VPS30Q02948 557 aa3.51□□□□□ -1.85
ROX1YPR065W CRR1Q05790 422 aa3.51□□□□□ -1.85
ROX1YPR065W YLR225CQ05948 407 aaKnown RBP3.51□□□□□ -1.85
ROX1YPR065W SEG1Q04279 960 aa3.5□□□□□ -1.85
ROX1YPR065W YPR196WQ06595 470 aa3.5□□□□□ -1.85
ROX1YPR065W CDC12P32468 407 aaKnown RBP3.49□□□□□ -1.85
ROX1YPR065W YBR238CP38330 731 aaKnown RBP3.49□□□□□ -1.85
ROX1YPR065W SSL2Q00578 843 aa3.49□□□□□ -1.85
ROX1YPR065W SGO1Q08490 590 aa3.49□□□□□ -1.85
ROX1YPR065W TUB3P09734 445 aaKnown RBP3.48□□□□□ -1.85
ROX1YPR065W STE13P33894 931 aa3.48□□□□□ -1.85
ROX1YPR065W LTP1P40347 161 aa3.48□□□□□ -1.85
ROX1YPR065W YGR053CP53234 283 aa3.48□□□□□ -1.85
ROX1YPR065W NOT3P06102 836 aaKnown RBP3.47□□□□□ -1.85
ROX1YPR065W NAP1P25293 417 aaKnown RBP3.47□□□□□ -1.85
ROX1YPR065W YBR053CP38235 358 aa3.47□□□□□ -1.85
ROX1YPR065W RPP1P38786 293 aa3.47□□□□□ -1.85
ROX1YPR065W CTF8P38877 133 aa3.47□□□□□ -1.85
ROX1YPR065W FKH2P41813 862 aa3.47□□□□□ -1.85
ROX1YPR065W BNA3P47039 444 aaKnown RBP3.47□□□□□ -1.85
ROX1YPR065W RIM13Q03792 727 aa3.47□□□□□ -1.85
ROX1YPR065W JIP5Q06214 492 aaPredicted RBP3.47□□□□□ -1.85
ROX1YPR065W CDC48P25694 835 aaKnown RBP3.46□□□□□ -1.86
ROX1YPR065W PAM1P37304 830 aaKnown RBP3.46□□□□□ -1.86
ROX1YPR065W YEL020CP39994 560 aa3.46□□□□□ -1.86
ROX1YPR065W YKE2P52553 114 aa3.46□□□□□ -1.86
ROX1YPR065W SVF1Q05515 481 aa3.46□□□□□ -1.86
ROX1YPR065W TAF3Q12297 353 aa3.46□□□□□ -1.86
ROX1YPR065W HOM2P13663 365 aaKnown RBP3.45□□□□□ -1.86
ROX1YPR065W PTP1P25044 335 aa3.45□□□□□ -1.86
ROX1YPR065W SBA1P28707 216 aaKnown RBP3.45□□□□□ -1.86
ROX1YPR065W SSL1Q04673 461 aaPredicted RBP3.45□□□□□ -1.86
ROX1YPR065W AGP1P25376 633 aa3.44□□□□□ -1.86
ROX1YPR065W ABD1P32783 436 aaPredicted RBP3.44□□□□□ -1.86
ROX1YPR065W YJL206CP39529 758 aa3.44□□□□□ -1.86
ROX1YPR065W MAD1P40957 749 aa3.44□□□□□ -1.86
ROX1YPR065W BPL1P48445 690 aaPredicted RBP3.44□□□□□ -1.86
ROX1YPR065W MPS1P54199 764 aa3.44□□□□□ -1.86
ROX1YPR065W DUS3Q06053 668 aaKnown RBP3.44□□□□□ -1.86
ROX1YPR065W ESC2Q06340 456 aa3.44□□□□□ -1.86
ROX1YPR065W RGT2Q12300 763 aa3.44□□□□□ -1.86
ROX1YPR065W VPS34P22543 875 aa3.43□□□□□ -1.86
ROX1YPR065W TSL1P38427 1098 aaKnown RBP3.43□□□□□ -1.86
ROX1YPR065W CBR1P38626 284 aaKnown RBP3.43□□□□□ -1.86
ROX1YPR065W MBP1P39678 833 aa3.43□□□□□ -1.86
ROX1YPR065W YIR042CP40586 236 aa3.43□□□□□ -1.86
ROX1YPR065W FAA4P47912 694 aaKnown RBP3.43□□□□□ -1.86
ROX1YPR065W HSV2P50079 448 aaPredicted RBP3.43□□□□□ -1.86
ROX1YPR065W SMX3P54999 86 aaPredicted RBP3.43□□□□□ -1.86
ROX1YPR065W GDE1Q02979 1223 aa3.43□□□□□ -1.86
ROX1YPR065W CLN2P20438 545 aa3.42□□□□□ -1.86
ROX1YPR065W NGG1P32494 702 aa3.42□□□□□ -1.86
ROX1YPR065W FMP52P40008 231 aa3.42□□□□□ -1.86
ROX1YPR065W YIL108WP40483 696 aaKnown RBP3.42□□□□□ -1.86
ROX1YPR065W NET1P47035 1189 aa3.42□□□□□ -1.86
ROX1YPR065W YAP1802P53309 568 aa3.42□□□□□ -1.86
ROX1YPR065W FAL1Q12099 399 aaKnown RBP3.42□□□□□ -1.86
ROX1YPR065W ADE8P04161 214 aa3.41□□□□□ -1.86
ROX1YPR065W PAC2P39937 518 aa3.41□□□□□ -1.86
ROX1YPR065W GUS1P46655 708 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
ROX1YPR065W TEL2P53038 688 aa3.41□□□□□ -1.86
ROX1YPR065W CWC24P53769 259 aa3.41□□□□□ -1.86
ROX1YPR065W SHE9Q04172 456 aa3.41□□□□□ -1.86
ROX1YPR065W EMP70P32802 667 aa3.4□□□□□ -1.87
ROX1YPR065W IRC13Q08630 104 aa3.4□□□□□ -1.87
ROX1YPR065W LAT1P12695 482 aaKnown RBP3.39□□□□□ -1.87
ROX1YPR065W PPH3P32345 308 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms