RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	CCC2	P38995	1004 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	RSP5	P39940	809 aa	Known RBP	2.32	□□□□□ -2.04
RLM1	YPL089C	CHZ1	P40019	153 aa	Predicted RBP	2.32	□□□□□ -2.04
RLM1	YPL089C	PSP2	P50109	593 aa	Known RBP	2.32	□□□□□ -2.04
RLM1	YPL089C	TPO2	P53283	614 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	SPO75	Q07798	868 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	FLC1	Q08967	793 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	NTO1	Q12311	748 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	PMA1	P05030	918 aa	Known RBP	2.32	□□□□□ -2.04
RLM1	YPL089C	EXG2	P52911	562 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	NCS6	P53088	359 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	YGR125W	P53273	1036 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	LCD1	Q04377	747 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	YPR196W	Q06595	470 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	KCS1	Q12494	1050 aa		2.32	□□□□□ -2.04
RLM1	YPL089C	SCT1	P32784	759 aa		2.31	□□□□□ -2.04
RLM1	YPL089C	TIM23	P32897	222 aa		2.31	□□□□□ -2.04
RLM1	YPL089C	TOK1	P40310	691 aa		2.31	□□□□□ -2.04
RLM1	YPL089C	ALR2	P43553	858 aa		2.31	□□□□□ -2.04
RLM1	YPL089C	CCM1	P48237	864 aa	Predicted RBP	2.31	□□□□□ -2.04
RLM1	YPL089C	PHO23	P50947	330 aa		2.31	□□□□□ -2.04
RLM1	YPL089C	RAI1	P53063	387 aa	Known RBP	2.31	□□□□□ -2.04
RLM1	YPL089C	EAF1	Q06337	982 aa		2.31	□□□□□ -2.04
RLM1	YPL089C	WHI4	Q07655	649 aa	Known RBP	2.31	□□□□□ -2.04
RLM1	YPL089C	OSH2	Q12451	1283 aa		2.31	□□□□□ -2.04
RLM1	YPL089C	NOT3	P06102	836 aa	Known RBP	2.3	□□□□□ -2.04
RLM1	YPL089C	FBP1	P09201	348 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	PHO8	P11491	566 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	HSP60	P19882	572 aa	Known RBP	2.3	□□□□□ -2.04
RLM1	YPL089C	CDC11	P32458	415 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	STE14	P32584	239 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	REC104	P33323	182 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	STE13	P33894	931 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	OAR1	P35731	278 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	ERT1	P38140	529 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	MNN1	P39106	762 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	ERP6	P53198	216 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	POB3	Q04636	552 aa	Known RBP	2.3	□□□□□ -2.04
RLM1	YPL089C	UBX5	Q06682	500 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	UPC2	Q12151	913 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	YPR071W	Q12346	211 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	HBN1	Q96VH4	193 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	CIT1	P00890	479 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	CAN1	P04817	590 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	DEF1	P35732	738 aa	Known RBP	2.3	□□□□□ -2.04
RLM1	YPL089C	YBR284W	P38150	797 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	GGA2	P38817	585 aa	Known RBP	2.3	□□□□□ -2.04
RLM1	YPL089C	GUP2	Q08929	609 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	YLR125W	Q12138	136 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	NPC2	Q12408	173 aa		2.3	□□□□□ -2.04
RLM1	YPL089C	ERR1	P0CX10	437 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	ERR2	P0CX11	437 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	ARE1	P25628	610 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	THI4	P32318	326 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	PET10	P36139	283 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.29	□□□□□ -2.04	RIP-Chip
RLM1	YPL089C	UTP14	Q04500	899 aa	Known RBP	2.29	□□□□□ -2.04
RLM1	YPL089C	SSL1	Q04673	461 aa	Predicted RBP	2.29	□□□□□ -2.04
RLM1	YPL089C	ENB1	Q08299	606 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	LAS17	Q12446	633 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	TOP3	P13099	656 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	MSD1	P15179	658 aa	Known RBP	2.29	□□□□□ -2.04
RLM1	YPL089C	GAL11	P19659	1081 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	TSR4	P25040	408 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	SED4	P25365	1065 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	KAR4	P25583	335 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	HUL4	P40985	892 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	HDA1	P53973	706 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	YAP7	Q08182	245 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	AFT2	Q08957	416 aa		2.29	□□□□□ -2.04
RLM1	YPL089C	PFK1	P16861	987 aa	Known RBP	2.28	□□□□□ -2.04
RLM1	YPL089C	RPD3	P32561	433 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	MSS4	P38994	779 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	STU2	P46675	888 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	YJR142W	P47173	342 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	DNM1	P54861	757 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	SLU7	Q02775	382 aa	Known RBP	2.28	□□□□□ -2.04
RLM1	YPL089C	VPS30	Q02948	557 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	TAF8	Q03750	510 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	YGR161W-C	Q3E744	92 aa		2.28	□□□□□ -2.04
RLM1	YPL089C	RFA1	P22336	621 aa	Known RBP	2.27	□□□□□ -2.05
RLM1	YPL089C	TYE7	P33122	291 aa	Predicted RBP	2.27	□□□□□ -2.05
RLM1	YPL089C	CTF8	P38877	133 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	SDP1	P40479	209 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	UBP6	P43593	499 aa	Known RBP	2.27	□□□□□ -2.05
RLM1	YPL089C	RTA1	P53047	317 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	YKR011C	Q02209	353 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	ENV7	Q12003	364 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	URA1	P28272	314 aa	Predicted RBP	2.27	□□□□□ -2.05
RLM1	YPL089C	GRX4	P32642	244 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	TOM20	P35180	183 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	BET3	P36149	193 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	YIL108W	P40483	696 aa	Known RBP	2.27	□□□□□ -2.05
RLM1	YPL089C	CEP3	P40969	608 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	BUL1	P48524	976 aa		2.27	□□□□□ -2.05
RLM1	YPL089C	YDL124W	Q07551	312 aa	Known RBP	2.27	□□□□□ -2.05
RLM1	YPL089C	NOP14	Q99207	810 aa	Known RBP	2.27	□□□□□ -2.05
RLM1	YPL089C	TRP4	P07285	380 aa	Predicted RBP	2.26	□□□□□ -2.05
RLM1	YPL089C	MPH2	P0CD99	609 aa		2.26	□□□□□ -2.05
RLM1	YPL089C	MSH2	P25847	964 aa		2.26	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms