RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W YIL108WP40483 696 aaKnown RBP6.54□□□□□ -1.36
VAM3YOR106W NIT3P49954 291 aa6.54□□□□□ -1.36
VAM3YOR106W SSL1Q04673 461 aaPredicted RBP6.54□□□□□ -1.36
VAM3YOR106W BDF2Q07442 638 aa6.54□□□□□ -1.36
VAM3YOR106W UPC2Q12151 913 aa6.54□□□□□ -1.36
VAM3YOR106W RPS9AO13516 197 aaKnown RBP6.53□□□□□ -1.36
VAM3YOR106W MPH2P0CD99 609 aa6.53□□□□□ -1.36
VAM3YOR106W STI1P15705 589 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
VAM3YOR106W PFK1P16861 987 aaKnown RBP6.53□□□□□ -1.36
VAM3YOR106W URA1P28272 314 aaPredicted RBP6.53□□□□□ -1.36
VAM3YOR106W PMI40P29952 429 aaKnown RBP6.53□□□□□ -1.36
VAM3YOR106W GGA2P38817 585 aaKnown RBP6.53□□□□□ -1.36
VAM3YOR106W UBP6P43593 499 aaKnown RBP6.53□□□□□ -1.36
VAM3YOR106W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
VAM3YOR106W NSE3Q05541 303 aa6.53□□□□□ -1.36
VAM3YOR106W GAL11P19659 1081 aa6.52□□□□□ -1.37
VAM3YOR106W CAD1P24813 409 aaKnown RBP6.52□□□□□ -1.37
VAM3YOR106W RPD3P32561 433 aa6.52□□□□□ -1.37
VAM3YOR106W YKR011CQ02209 353 aa6.52□□□□□ -1.37
VAM3YOR106W GUP2Q08929 609 aa6.52□□□□□ -1.37
VAM3YOR106W YOR131CQ12486 218 aa6.52□□□□□ -1.37
VAM3YOR106W RSP5P39940 809 aaKnown RBP6.51□□□□□ -1.37
VAM3YOR106W ENB1Q08299 606 aa6.51□□□□□ -1.37
VAM3YOR106W ENV7Q12003 364 aa6.51□□□□□ -1.37
VAM3YOR106W YOL098CQ12496 1037 aa6.51□□□□□ -1.37
VAM3YOR106W CAN1P04817 590 aa6.5□□□□□ -1.37
VAM3YOR106W KAR4P25583 335 aa6.5□□□□□ -1.37
VAM3YOR106W MSE1P48525 536 aa6.5□□□□□ -1.37
VAM3YOR106W PUS2P53167 370 aa6.5□□□□□ -1.37
VAM3YOR106W AIM21P40563 679 aa6.49□□□□□ -1.37
VAM3YOR106W AIM39Q08223 395 aa6.49□□□□□ -1.37
VAM3YOR106W SRP40P32583 406 aaPredicted RBP6.48□□□□□ -1.37
VAM3YOR106W STE14P32584 239 aa6.48□□□□□ -1.37
VAM3YOR106W DEF1P35732 738 aaKnown RBP6.48□□□□□ -1.37
VAM3YOR106W SDP1P40479 209 aa6.48□□□□□ -1.37
VAM3YOR106W NOG2P53742 486 aaKnown RBP6.48□□□□□ -1.37
VAM3YOR106W HDA1P53973 706 aa6.48□□□□□ -1.37
VAM3YOR106W PUS9Q12069 462 aa6.48□□□□□ -1.37
VAM3YOR106W PNS1Q12412 539 aa6.48□□□□□ -1.37
VAM3YOR106W FBP1P09201 348 aa6.47□□□□□ -1.37
VAM3YOR106W BET3P36149 193 aa6.47□□□□□ -1.37
VAM3YOR106W ALG2P43636 503 aa6.47□□□□□ -1.37
VAM3YOR106W DAM1P53267 343 aa6.47□□□□□ -1.37
VAM3YOR106W HRR25P29295 494 aaKnown RBP6.46□□□□□ -1.38
VAM3YOR106W DAL7P21826 554 aa6.45□□□□□ -1.38
VAM3YOR106W CYS3P31373 394 aaKnown RBP6.45□□□□□ -1.38
VAM3YOR106W YKL091CP33324 310 aaKnown RBP6.45□□□□□ -1.38
VAM3YOR106W EMC3P36039 253 aa6.45□□□□□ -1.38
VAM3YOR106W CTF8P38877 133 aa6.45□□□□□ -1.38
VAM3YOR106W MSS4P38994 779 aa6.45□□□□□ -1.38
VAM3YOR106W RTA1P53047 317 aa6.45□□□□□ -1.38
VAM3YOR106W SUN4P53616 420 aa6.45□□□□□ -1.38
VAM3YOR106W PEX19Q07418 342 aa6.45□□□□□ -1.38
VAM3YOR106W SWM1Q12379 170 aa6.45□□□□□ -1.38
VAM3YOR106W YHR078WP38799 552 aa6.44□□□□□ -1.38
VAM3YOR106W CHZ1P40019 153 aaPredicted RBP6.44□□□□□ -1.38
VAM3YOR106W GYP8P43570 497 aa6.44□□□□□ -1.38
VAM3YOR106W YGR283CP53336 341 aaPredicted RBP6.44□□□□□ -1.38
VAM3YOR106W LAS17Q12446 633 aa6.44□□□□□ -1.38
VAM3YOR106W PHR1P05066 565 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
VAM3YOR106W SEC21P32074 935 aaKnown RBP6.43□□□□□ -1.38
VAM3YOR106W SAP190P36123 1033 aa6.43□□□□□ -1.38
VAM3YOR106W OCA5P38738 679 aa6.43□□□□□ -1.38
VAM3YOR106W TAD1P53065 400 aa6.43□□□□□ -1.38
VAM3YOR106W KIN4Q01919 800 aa6.43□□□□□ -1.38
VAM3YOR106W YDR514CQ04408 483 aa6.43□□□□□ -1.38
VAM3YOR106W REH1Q06709 432 aa6.43□□□□□ -1.38
VAM3YOR106W PRC1P00729 532 aa6.42□□□□□ -1.38
VAM3YOR106W EFT1P32324 842 aaKnown RBP6.41□□□□□ -1.38
VAM3YOR106W DUS1P53759 423 aaKnown RBP6.41□□□□□ -1.38
VAM3YOR106W HAL9Q12180 1030 aa6.41□□□□□ -1.38
VAM3YOR106W YOR022CQ12204 715 aa6.41□□□□□ -1.38
VAM3YOR106W TRP4P07285 380 aaPredicted RBP6.4□□□□□ -1.38
VAM3YOR106W RPN4Q03465 531 aa6.4□□□□□ -1.38
VAM3YOR106W LRS4Q04087 347 aaKnown RBP6.4□□□□□ -1.38
VAM3YOR106W SLU7Q02775 382 aaKnown RBP6.39□□□□□ -1.39
VAM3YOR106W MET7Q08645 548 aa6.39□□□□□ -1.39
VAM3YOR106W TRM11Q12463 433 aa6.39□□□□□ -1.39
VAM3YOR106W TUB3P09734 445 aaKnown RBP6.38□□□□□ -1.39
VAM3YOR106W YCL002CP25565 263 aa6.38□□□□□ -1.39
VAM3YOR106W SPC29P33419 253 aa6.38□□□□□ -1.39
VAM3YOR106W SHR5P41912 237 aa6.38□□□□□ -1.39
VAM3YOR106W ATP25Q03153 612 aa6.38□□□□□ -1.39
VAM3YOR106W PPM2Q08282 695 aa6.38□□□□□ -1.39
VAM3YOR106W ERR1P0CX10 437 aa6.37□□□□□ -1.39
VAM3YOR106W ERR2P0CX11 437 aa6.37□□□□□ -1.39
VAM3YOR106W RAD53P22216 821 aa6.37□□□□□ -1.39
VAM3YOR106W CTF13P35203 478 aa6.37□□□□□ -1.39
VAM3YOR106W KTR4P38131 464 aa6.37□□□□□ -1.39
VAM3YOR106W PBP2P38151 413 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
VAM3YOR106W SUL1P38359 859 aa6.37□□□□□ -1.39
VAM3YOR106W SET5P38890 526 aaKnown RBP6.37□□□□□ -1.39
VAM3YOR106W PZF1P39933 429 aa6.37□□□□□ -1.39
VAM3YOR106W BUL1P48524 976 aa6.37□□□□□ -1.39
VAM3YOR106W HSV2P50079 448 aaPredicted RBP6.37□□□□□ -1.39
VAM3YOR106W PKH1Q03407 766 aa6.37□□□□□ -1.39
VAM3YOR106W RSC3Q06639 885 aa6.37□□□□□ -1.39
VAM3YOR106W ERG4P25340 473 aa6.36□□□□□ -1.39
VAM3YOR106W NGG1P32494 702 aa6.36□□□□□ -1.39
VAM3YOR106W TIM23P32897 222 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 66.4 ms