RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C RAD53P22216 821 aa4.41□□□□□ -1.7
ATG3YNR007C RPC82P32349 654 aa4.41□□□□□ -1.7
ATG3YNR007C ABD1P32783 436 aaPredicted RBP4.41□□□□□ -1.7
ATG3YNR007C ENB1Q08299 606 aa4.41□□□□□ -1.7
ATG3YNR007C YRF1-1P0CX20 1796 aa4.4□□□□□ -1.7
ATG3YNR007C YRF1-5P0CX21 1796 aa4.4□□□□□ -1.7
ATG3YNR007C YRF1-8P0CX22 1796 aa4.4□□□□□ -1.7
ATG3YNR007C NAP1P25293 417 aaKnown RBP4.4□□□□□ -1.71
ATG3YNR007C SBA1P28707 216 aaKnown RBP4.4□□□□□ -1.71
ATG3YNR007C HRR25P29295 494 aaKnown RBP4.4□□□□□ -1.71
ATG3YNR007C NCS6P53088 359 aa4.4□□□□□ -1.71
ATG3YNR007C NPC2Q12408 173 aa4.4□□□□□ -1.71
ATG3YNR007C VTH1P40438 1549 aa4.4□□□□□ -1.71
ATG3YNR007C VTH2P40890 1549 aa4.4□□□□□ -1.71
ATG3YNR007C TY1B-DR3Q99231 1755 aa4.4□□□□□ -1.71
ATG3YNR007C CLN2P20438 545 aa4.39□□□□□ -1.71
ATG3YNR007C AGP1P25376 633 aa4.39□□□□□ -1.71
ATG3YNR007C CDC12P32468 407 aaKnown RBP4.39□□□□□ -1.71
ATG3YNR007C NPP2P39997 493 aa4.39□□□□□ -1.71
ATG3YNR007C GUP2Q08929 609 aa4.39□□□□□ -1.71
ATG3YNR007C MBP1P39678 833 aa4.38□□□□□ -1.71
ATG3YNR007C SFB2P53953 876 aa4.38□□□□□ -1.71
ATG3YNR007C FAL1Q12099 399 aaKnown RBP4.38□□□□□ -1.71
ATG3YNR007C SNT2P53127 1403 aa4.38□□□□□ -1.71
ATG3YNR007C GYP7P48365 746 aa4.37□□□□□ -1.71
ATG3YNR007C DUS3Q06053 668 aaKnown RBP4.37□□□□□ -1.71
ATG3YNR007C WHI4Q07655 649 aaKnown RBP4.37□□□□□ -1.71
ATG3YNR007C KAR4P25583 335 aa4.36□□□□□ -1.71
ATG3YNR007C OAR1P35731 278 aa4.36□□□□□ -1.71
ATG3YNR007C YKR078WP36158 585 aaKnown RBP4.36□□□□□ -1.71
ATG3YNR007C MAD1P40957 749 aa4.36□□□□□ -1.71
ATG3YNR007C SNU71P53207 620 aaKnown RBP4.36□□□□□ -1.71
ATG3YNR007C YPR196WQ06595 470 aa4.36□□□□□ -1.71
ATG3YNR007C PIN2Q12057 282 aa4.36□□□□□ -1.71
ATG3YNR007C LAS17Q12446 633 aa4.36□□□□□ -1.71
ATG3YNR007C BUD3P25558 1636 aa4.35□□□□□ -1.71
ATG3YNR007C RPO21P04050 1733 aaKnown RBP4.35□□□□□ -1.71
ATG3YNR007C EFT1P32324 842 aaKnown RBP4.35□□□□□ -1.71
ATG3YNR007C MOH1P38191 138 aa4.35□□□□□ -1.71
ATG3YNR007C GUS1P46655 708 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
ATG3YNR007C CWC24P53769 259 aa4.35□□□□□ -1.71
ATG3YNR007C SHE9Q04172 456 aa4.35□□□□□ -1.71
ATG3YNR007C PPM2Q08282 695 aa4.35□□□□□ -1.71
ATG3YNR007C UPC2Q12151 913 aa4.35□□□□□ -1.71
ATG3YNR007C TRM3Q07527 1436 aa4.35□□□□□ -1.71
ATG3YNR007C NUP170P38181 1502 aa4.35□□□□□ -1.71
ATG3YNR007C CAD1P24813 409 aaKnown RBP4.34□□□□□ -1.71
ATG3YNR007C YPT53P36019 220 aa4.34□□□□□ -1.71
ATG3YNR007C VBA5P36172 582 aa4.34□□□□□ -1.71
ATG3YNR007C YER158CP40095 573 aa4.34□□□□□ -1.71
ATG3YNR007C RAI1P53063 387 aaKnown RBP4.34□□□□□ -1.71
ATG3YNR007C VPS16Q03308 798 aa4.34□□□□□ -1.71
ATG3YNR007C SVF1Q05515 481 aa4.34□□□□□ -1.71
ATG3YNR007C TY1B-JR2P47100 1755 aaKnown RBP4.34□□□□□ -1.71
ATG3YNR007C TY1B-ER2Q03619 1755 aa4.34□□□□□ -1.71
ATG3YNR007C TY1B-MR1Q04214 1755 aa4.34□□□□□ -1.71
ATG3YNR007C TY1B-MR2Q04670 1755 aaKnown RBP4.34□□□□□ -1.71
ATG3YNR007C TY1B-LR1Q12088 1755 aaKnown RBP4.34□□□□□ -1.71
ATG3YNR007C TY1B-NL1Q12112 1755 aa4.34□□□□□ -1.71
ATG3YNR007C TY1B-GR1Q12141 1755 aa4.34□□□□□ -1.71
ATG3YNR007C TY1B-BLQ12490 1755 aa4.34□□□□□ -1.71
ATG3YNR007C SED4P25365 1065 aa4.33□□□□□ -1.72
ATG3YNR007C KTR4P38131 464 aa4.33□□□□□ -1.72
ATG3YNR007C TSL1P38427 1098 aaKnown RBP4.33□□□□□ -1.72
ATG3YNR007C BUL1P48524 976 aa4.33□□□□□ -1.72
ATG3YNR007C OPI10Q08202 246 aa4.33□□□□□ -1.72
ATG3YNR007C CDC48P25694 835 aaKnown RBP4.32□□□□□ -1.72
ATG3YNR007C PPH3P32345 308 aa4.32□□□□□ -1.72
ATG3YNR007C STE14P32584 239 aa4.32□□□□□ -1.72
ATG3YNR007C YBR238CP38330 731 aaKnown RBP4.32□□□□□ -1.72
ATG3YNR007C UBA2P52488 636 aa4.32□□□□□ -1.72
ATG3YNR007C YKE2P52553 114 aa4.32□□□□□ -1.72
ATG3YNR007C YDR306CQ06640 478 aa4.32□□□□□ -1.72
ATG3YNR007C YLR040CQ07988 224 aa4.32□□□□□ -1.72
ATG3YNR007C YOL073CQ08232 322 aa4.32□□□□□ -1.72
ATG3YNR007C SNQ2P32568 1501 aaKnown RBP4.31□□□□□ -1.72
ATG3YNR007C PDR12Q02785 1511 aa4.31□□□□□ -1.72
ATG3YNR007C ADE8P04161 214 aa4.31□□□□□ -1.72
ATG3YNR007C TRP4P07285 380 aaPredicted RBP4.31□□□□□ -1.72
ATG3YNR007C SUL1P38359 859 aa4.31□□□□□ -1.72
ATG3YNR007C NOP7P53261 605 aaKnown RBP4.31□□□□□ -1.72
ATG3YNR007C MLP2P40457 1679 aa4.3□□□□□ -1.72
ATG3YNR007C NOT3P06102 836 aaKnown RBP4.3□□□□□ -1.72
ATG3YNR007C ERG4P25340 473 aa4.3□□□□□ -1.72
ATG3YNR007C MRP8P35719 219 aa4.3□□□□□ -1.72
ATG3YNR007C ULS1Q08562 1619 aa4.3□□□□□ -1.72
ATG3YNR007C IQG1Q12280 1495 aa4.3□□□□□ -1.72
ATG3YNR007C DOP1Q03921 1698 aa4.29□□□□□ -1.72
ATG3YNR007C PDR10P51533 1564 aa4.29□□□□□ -1.72
ATG3YNR007C TOM1Q03280 3268 aa4.29□□□□□ -1.72
ATG3YNR007C PRI2P20457 528 aa4.29□□□□□ -1.72
ATG3YNR007C NPP1P25353 742 aa4.29□□□□□ -1.72
ATG3YNR007C AAR2P32357 355 aaPredicted RBP4.29□□□□□ -1.72
ATG3YNR007C STE13P33894 931 aa4.29□□□□□ -1.72
ATG3YNR007C YKL069WP36088 180 aa4.29□□□□□ -1.72
ATG3YNR007C PBY1P38254 753 aa4.29□□□□□ -1.72
ATG3YNR007C VPS30Q02948 557 aa4.29□□□□□ -1.72
ATG3YNR007C JIP5Q06214 492 aaPredicted RBP4.29□□□□□ -1.72
ATG3YNR007C SPO14P36126 1683 aa4.29□□□□□ -1.72
ATG3YNR007C AFR1P33304 620 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms