RNA–Protein interactions for RNA: YML010W

SPT5, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeast

Gene SPT5, Length 3,192 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT5	YML010W	DEF1	P35732	738 aa	Known RBP	13.91	□□□□□ -0.18
SPT5	YML010W	PCL10	P53124	433 aa		13.91	□□□□□ -0.18
SPT5	YML010W	UBX4	P54730	416 aa		13.91	□□□□□ -0.18
SPT5	YML010W	EEB1	Q02891	456 aa		13.91	□□□□□ -0.18
SPT5	YML010W	YME1	P32795	747 aa		13.9	□□□□□ -0.18
SPT5	YML010W	GAA1	P39012	614 aa		13.9	□□□□□ -0.18
SPT5	YML010W	YIL001W	P40560	513 aa		13.9	□□□□□ -0.18
SPT5	YML010W	ZIP2	P53061	704 aa		13.9	□□□□□ -0.18
SPT5	YML010W	YMR018W	Q04364	514 aa		13.9	□□□□□ -0.18
SPT5	YML010W	TSR1	Q07381	788 aa	Known RBP	13.9	□□□□□ -0.18
SPT5	YML010W	PUP2	P32379	260 aa		13.9	□□□□□ -0.18
SPT5	YML010W	UBP14	P38237	781 aa	Known RBP	13.9	□□□□□ -0.18
SPT5	YML010W	AXL1	P40851	1208 aa		13.9	□□□□□ -0.18
SPT5	YML010W	TMA64	Q04600	565 aa	Known RBP	13.9	□□□□□ -0.18
SPT5	YML010W	PMD1	P32634	1753 aa		13.89	□□□□□ -0.19
SPT5	YML010W	BLI1	P35727	113 aa		13.89	□□□□□ -0.19
SPT5	YML010W	RRT2	P38332	387 aa		13.89	□□□□□ -0.19
SPT5	YML010W	HIS2	P38635	335 aa		13.89	□□□□□ -0.19
SPT5	YML010W	NNF2	P53253	936 aa		13.89	□□□□□ -0.19
SPT5	YML010W	MFM1	Q02783	413 aa		13.89	□□□□□ -0.19
SPT5	YML010W	ILV1	P00927	576 aa	Known RBP	13.89	□□□□□ -0.19
SPT5	YML010W	NIP1	P32497	812 aa	Known RBP	13.89	□□□□□ -0.19
SPT5	YML010W	MSN5	P52918	1224 aa		13.89	□□□□□ -0.19
SPT5	YML010W	YNL040W	P53960	456 aa	Predicted RBP	13.89	□□□□□ -0.19
SPT5	YML010W	UBP1	P25037	809 aa		13.89	□□□□□ -0.19
SPT5	YML010W	FIG2	P25653	1609 aa		13.88	□□□□□ -0.19
SPT5	YML010W	REC107	P21651	314 aa		13.88	□□□□□ -0.19
SPT5	YML010W	SMY1	P32364	656 aa	Known RBP	13.88	□□□□□ -0.19
SPT5	YML010W	YEL1	P34225	687 aa		13.88	□□□□□ -0.19
SPT5	YML010W	YJL181W	P46987	611 aa		13.88	□□□□□ -0.19
SPT5	YML010W	YML082W	Q04533	649 aa	Known RBP	13.88	□□□□□ -0.19
SPT5	YML010W	VIP1	Q06685	1146 aa	Known RBP	13.88	□□□□□ -0.19
SPT5	YML010W	PWP1	P21304	576 aa	Known RBP	13.88	□□□□□ -0.19
SPT5	YML010W	EFB1	P32471	206 aa	Known RBP	13.88	□□□□□ -0.19
SPT5	YML010W	SSP1	P38871	571 aa		13.88	□□□□□ -0.19
SPT5	YML010W	SUM1	P46676	1062 aa		13.88	□□□□□ -0.19
SPT5	YML010W	DAS1	P47005	663 aa		13.88	□□□□□ -0.19
SPT5	YML010W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.88	□□□□□ -0.19	not detected
SPT5	YML010W	WRS1	Q12109	432 aa	Known RBP	13.88	□□□□□ -0.19
SPT5	YML010W	SHE9	Q04172	456 aa		13.87	□□□□□ -0.19
SPT5	YML010W	MDR1	P53258	950 aa		13.87	□□□□□ -0.19
SPT5	YML010W	YLR297W	Q05899	129 aa		13.87	□□□□□ -0.19
SPT5	YML010W	ERP5	P38819	212 aa		13.87	□□□□□ -0.19
SPT5	YML010W	HXT8	P40886	569 aa		13.87	□□□□□ -0.19
SPT5	YML010W	YML119W	Q03208	357 aa		13.87	□□□□□ -0.19
SPT5	YML010W	DIB1	Q06819	143 aa	Predicted RBP	13.87	□□□□□ -0.19
SPT5	YML010W	CBF1	P17106	351 aa		13.86	□□□□□ -0.19
SPT5	YML010W	BUL2	Q03758	920 aa	Known RBP	13.86	□□□□□ -0.19
SPT5	YML010W	MED1	Q12321	566 aa		13.86	□□□□□ -0.19
SPT5	YML010W	RPL8A	P17076	256 aa	Known RBP	13.86	□□□□□ -0.19
SPT5	YML010W	STN1	P38960	494 aa		13.86	□□□□□ -0.19
SPT5	YML010W	UBP9	P39967	754 aa		13.86	□□□□□ -0.19
SPT5	YML010W	YNL011C	P53980	444 aa		13.86	□□□□□ -0.19
SPT5	YML010W	SYH1	Q02875	849 aa	Known RBP	13.86	□□□□□ -0.19
SPT5	YML010W	YKU80	Q04437	629 aa		13.86	□□□□□ -0.19
SPT5	YML010W	RRN6	P32786	894 aa		13.85	□□□□□ -0.19
SPT5	YML010W	HOS4	P40480	1083 aa		13.85	□□□□□ -0.19
SPT5	YML010W	MDJ2	P42834	146 aa		13.85	□□□□□ -0.19
SPT5	YML010W	EMW1	P42842	904 aa	Known RBP	13.85	□□□□□ -0.19
SPT5	YML010W	SAK1	P38990	1142 aa		13.85	□□□□□ -0.19
SPT5	YML010W	APL6	P46682	809 aa		13.85	□□□□□ -0.19
SPT5	YML010W	SAM2	P19358	384 aa	Known RBP	13.85	□□□□□ -0.19
SPT5	YML010W	EXO5	P38289	585 aa		13.85	□□□□□ -0.19
SPT5	YML010W	NDT80	P38830	627 aa		13.85	□□□□□ -0.19
SPT5	YML010W	BUG1	Q12191	341 aa		13.85	□□□□□ -0.19
SPT5	YML010W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	13.84	□□□□□ -0.19	not detected
SPT5	YML010W	MSG5	P38590	489 aa		13.84	□□□□□ -0.19
SPT5	YML010W	PUS6	P53294	404 aa		13.84	□□□□□ -0.19
SPT5	YML010W	PEX2	P32800	271 aa		13.84	□□□□□ -0.19
SPT5	YML010W	VHC1	P38329	1120 aa		13.84	□□□□□ -0.19
SPT5	YML010W	SDS3	P40505	327 aa		13.84	□□□□□ -0.19
SPT5	YML010W	SET4	P42948	560 aa		13.84	□□□□□ -0.19
SPT5	YML010W	SPO16	P17122	198 aa		13.83	□□□□□ -0.19
SPT5	YML010W	MRF1	P30775	413 aa	Predicted RBP	13.83	□□□□□ -0.19
SPT5	YML010W	END3	P39013	349 aa		13.83	□□□□□ -0.19
SPT5	YML010W	RTP1	Q12751	981 aa		13.83	□□□□□ -0.19
SPT5	YML010W	TRZ1	P36159	838 aa	Predicted RBP	13.83	□□□□□ -0.2
SPT5	YML010W	NPR2	P39923	615 aa		13.83	□□□□□ -0.2
SPT5	YML010W	CLF1	Q12309	687 aa	Predicted RBP	13.83	□□□□□ -0.2
SPT5	YML010W	HIF1	Q12373	385 aa		13.83	□□□□□ -0.2
SPT5	YML010W	NCL1	P38205	684 aa	Known RBP	13.83	□□□□□ -0.2
SPT5	YML010W	OCA6	Q12454	224 aa		13.83	□□□□□ -0.2
SPT5	YML010W	YBR032W	P38223	100 aa		13.82	□□□□□ -0.2
SPT5	YML010W	TFC4	P33339	1025 aa		13.82	□□□□□ -0.2
SPT5	YML010W	TFC3	P34111	1160 aa		13.82	□□□□□ -0.2
SPT5	YML010W	IRC3	Q06683	689 aa		13.82	□□□□□ -0.2
SPT5	YML010W	SRM1	P21827	482 aa		13.81	□□□□□ -0.2
SPT5	YML010W	RPC37	P36121	282 aa		13.81	□□□□□ -0.2
SPT5	YML010W	SUL1	P38359	859 aa		13.81	□□□□□ -0.2
SPT5	YML010W	BRE2	P43132	505 aa		13.81	□□□□□ -0.2
SPT5	YML010W	DIP5	P53388	608 aa		13.81	□□□□□ -0.2
SPT5	YML010W	PEP5	P12868	1029 aa		13.81	□□□□□ -0.2
SPT5	YML010W	AAD16	Q02895	342 aa		13.81	□□□□□ -0.2
SPT5	YML010W	MTG1	Q03151	367 aa	Predicted RBP	13.81	□□□□□ -0.2
SPT5	YML010W	SLP1	Q12232	587 aa		13.81	□□□□□ -0.2
SPT5	YML010W	VPS45	P38932	577 aa		13.81	□□□□□ -0.2
SPT5	YML010W	TAN1	P53072	289 aa	Predicted RBP	13.81	□□□□□ -0.2
SPT5	YML010W	LGE1	Q02796	332 aa	Known RBP	13.81	□□□□□ -0.2
SPT5	YML010W	YPL277C	Q08989	487 aa		13.81	□□□□□ -0.2
SPT5	YML010W	PRE8	P23639	250 aa		13.8	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms