RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	LCB2	P40970	561 aa		13.82	□□□□□ -0.2
LSM3	YLR438C-A	SAD1	P43589	448 aa		13.82	□□□□□ -0.2
LSM3	YLR438C-A	HSH155	P49955	971 aa	Known RBP	13.82	□□□□□ -0.2
LSM3	YLR438C-A	DON1	Q05610	365 aa		13.82	□□□□□ -0.2
LSM3	YLR438C-A	SSB1	P11484	613 aa	Known RBP	13.81	□□□□□ -0.2
LSM3	YLR438C-A	SSB2	P40150	613 aa	Known RBP	13.81	□□□□□ -0.2
LSM3	YLR438C-A	FMP30	Q02883	468 aa		13.81	□□□□□ -0.2
LSM3	YLR438C-A	ECM7	Q06200	448 aa		13.81	□□□□□ -0.2
LSM3	YLR438C-A	CDC53	Q12018	815 aa	Known RBP	13.81	□□□□□ -0.2
LSM3	YLR438C-A	YDR524C-B	Q3E6R4	66 aa		13.81	□□□□□ -0.2
LSM3	YLR438C-A	RPS6A	P0CX37	236 aa	Known RBP	13.8	□□□□□ -0.2
LSM3	YLR438C-A	RPS6B	P0CX38	236 aa	Predicted RBP	13.8	□□□□□ -0.2
LSM3	YLR438C-A	VMA1	P17255	1071 aa	Known RBP	13.8	□□□□□ -0.2
LSM3	YLR438C-A	BUD2	P33314	1104 aa		13.8	□□□□□ -0.2
LSM3	YLR438C-A	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.8	□□□□□ -0.2	not detected
LSM3	YLR438C-A	EFM2	P38347	419 aa		13.8	□□□□□ -0.2
LSM3	YLR438C-A	INP51	P40559	946 aa	Known RBP	13.8	□□□□□ -0.2
LSM3	YLR438C-A	SGM1	P47166	707 aa		13.8	□□□□□ -0.2
LSM3	YLR438C-A	ORC5	P50874	479 aa		13.8	□□□□□ -0.2
LSM3	YLR438C-A	YPL034W	Q03083	165 aa		13.8	□□□□□ -0.2
LSM3	YLR438C-A	YLR287C	Q05881	355 aa		13.8	□□□□□ -0.2
LSM3	YLR438C-A	PLP2	Q12017	286 aa		13.8	□□□□□ -0.2
LSM3	YLR438C-A	SPO11	P23179	398 aa		13.79	□□□□□ -0.2
LSM3	YLR438C-A	NPP2	P39997	493 aa		13.79	□□□□□ -0.2
LSM3	YLR438C-A	TRS130	Q03660	1102 aa		13.79	□□□□□ -0.2
LSM3	YLR438C-A	FAL1	Q12099	399 aa	Known RBP	13.79	□□□□□ -0.2
LSM3	YLR438C-A	PHO13	P19881	312 aa		13.78	□□□□□ -0.2
LSM3	YLR438C-A	YFL040W	P43562	540 aa		13.78	□□□□□ -0.2
LSM3	YLR438C-A	MNP1	P53163	194 aa	Predicted RBP	13.78	□□□□□ -0.2
LSM3	YLR438C-A	ENV11	P53246	860 aa		13.78	□□□□□ -0.2
LSM3	YLR438C-A	ECM30	Q06673	1274 aa		13.78	□□□□□ -0.2
LSM3	YLR438C-A	SHS1	Q07657	551 aa		13.78	□□□□□ -0.2
LSM3	YLR438C-A	CWC2	Q12046	339 aa	Predicted RBP	13.78	□□□□□ -0.2
LSM3	YLR438C-A	FUB1	P25659	250 aa		13.77	□□□□□ -0.21
LSM3	YLR438C-A	DRE2	P36152	348 aa		13.77	□□□□□ -0.21
LSM3	YLR438C-A	SHM1	P37292	490 aa	Predicted RBP	13.77	□□□□□ -0.21
LSM3	YLR438C-A	MRX3	P38172	270 aa		13.77	□□□□□ -0.21
LSM3	YLR438C-A	MMS4	P38257	691 aa		13.77	□□□□□ -0.21
LSM3	YLR438C-A	ASN1	P49089	572 aa	Known RBP	13.77	□□□□□ -0.21
LSM3	YLR438C-A	SPC110	P32380	944 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	NIP100	P33420	868 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	YKL023W	P36103	277 aa	Known RBP	13.76	□□□□□ -0.21
LSM3	YLR438C-A	FIG4	P42837	879 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	LAM5	P43560	674 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	SMC3	P47037	1230 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	YNL134C	P53912	376 aa	Known RBP	13.76	□□□□□ -0.21
LSM3	YLR438C-A	MUK1	Q02866	612 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	YLR297W	Q05899	129 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	PIB1	Q06651	286 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	RRP6	Q12149	733 aa	Known RBP	13.76	□□□□□ -0.21
LSM3	YLR438C-A	ZPS1	Q12512	249 aa		13.76	□□□□□ -0.21
LSM3	YLR438C-A	CYC8	P14922	966 aa		13.75	□□□□□ -0.21
LSM3	YLR438C-A	XRS2	P33301	854 aa		13.75	□□□□□ -0.21
LSM3	YLR438C-A	RTT107	P38850	1070 aa		13.75	□□□□□ -0.21
LSM3	YLR438C-A	TVP23	P38962	199 aa		13.75	□□□□□ -0.21
LSM3	YLR438C-A	FTR1	P40088	404 aa		13.75	□□□□□ -0.21
LSM3	YLR438C-A	CEF1	Q03654	590 aa	Predicted RBP	13.75	□□□□□ -0.21
LSM3	YLR438C-A	ATG9	Q12142	997 aa		13.75	□□□□□ -0.21
LSM3	YLR438C-A	NAT1	P12945	854 aa	Known RBP	13.74	□□□□□ -0.21
LSM3	YLR438C-A	POT1	P27796	417 aa	Known RBP RIP-Chip data	13.74	□□□□□ -0.21	not detected
LSM3	YLR438C-A	SMC1	P32908	1225 aa		13.74	□□□□□ -0.21
LSM3	YLR438C-A	ALT2	P52892	507 aa		13.74	□□□□□ -0.21
LSM3	YLR438C-A	TBF1	Q02457	562 aa		13.74	□□□□□ -0.21
LSM3	YLR438C-A	DOT1	Q04089	582 aa	Known RBP	13.74	□□□□□ -0.21
LSM3	YLR438C-A	YPR078C	Q06813	372 aa		13.74	□□□□□ -0.21
LSM3	YLR438C-A	SLX4	Q12098	748 aa		13.74	□□□□□ -0.21
LSM3	YLR438C-A	LDB19	Q12502	818 aa		13.74	□□□□□ -0.21
LSM3	YLR438C-A	PCD1	Q12524	340 aa		13.74	□□□□□ -0.21
LSM3	YLR438C-A	ADE2	P21264	571 aa	Known RBP	13.73	□□□□□ -0.21
LSM3	YLR438C-A	SWI3	P32591	825 aa		13.73	□□□□□ -0.21
LSM3	YLR438C-A	SMC2	P38989	1170 aa	Known RBP	13.73	□□□□□ -0.21
LSM3	YLR438C-A	CWC21	Q03375	135 aa	Known RBP	13.73	□□□□□ -0.21
LSM3	YLR438C-A	RGA2	Q06407	1009 aa		13.73	□□□□□ -0.21
LSM3	YLR438C-A	YCG1	Q06680	1035 aa		13.73	□□□□□ -0.21
LSM3	YLR438C-A	CBF2	P32504	956 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	TRM2	P33753	639 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	FIR1	P40020	876 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	VFA1	P40080	203 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	YAP5	P40574	245 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	ISM1	P48526	1002 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	GCV2	P49095	1034 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	HFM1	P51979	1187 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	YNL115C	P53925	644 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	RPA49	Q01080	415 aa	Predicted RBP	13.72	□□□□□ -0.21
LSM3	YLR438C-A	UME1	Q03010	460 aa		13.72	□□□□□ -0.21
LSM3	YLR438C-A	CSR1	Q06705	408 aa	Known RBP	13.72	□□□□□ -0.21
LSM3	YLR438C-A	SGT2	Q12118	346 aa	Known RBP	13.72	□□□□□ -0.21
LSM3	YLR438C-A	TOM70	P07213	617 aa	Known RBP	13.71	□□□□□ -0.21
LSM3	YLR438C-A	PRR1	P28708	518 aa		13.71	□□□□□ -0.21
LSM3	YLR438C-A	ADE4	P04046	510 aa	Known RBP	13.7	□□□□□ -0.22
LSM3	YLR438C-A	GLN3	P18494	730 aa		13.7	□□□□□ -0.22
LSM3	YLR438C-A	MFT1	P33441	392 aa	Known RBP	13.7	□□□□□ -0.22
LSM3	YLR438C-A	WHI3	P34761	661 aa	Known RBP	13.7	□□□□□ -0.22
LSM3	YLR438C-A	KIC1	P38692	1080 aa		13.7	□□□□□ -0.22
LSM3	YLR438C-A	YAP1801	P38856	637 aa		13.7	□□□□□ -0.22
LSM3	YLR438C-A	SPO74	P45819	413 aa		13.7	□□□□□ -0.22
LSM3	YLR438C-A	STR2	P47164	639 aa		13.7	□□□□□ -0.22
LSM3	YLR438C-A	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.7	□□□□□ -0.22	not detected
LSM3	YLR438C-A	OPY2	Q06810	360 aa		13.7	□□□□□ -0.22
LSM3	YLR438C-A	IWR1	Q07532	353 aa	Predicted RBP	13.7	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 149.8 ms