RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeastyeast

Gene HCR1, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCR1YLR192C JIP5Q06214 492 aaPredicted RBP6.74□□□□□ -1.33
HCR1YLR192C GCN1P33892 2672 aaKnown RBP6.73□□□□□ -1.33
HCR1YLR192C SYP1P25623 870 aaKnown RBP6.73□□□□□ -1.33
HCR1YLR192C KIP1P28742 1111 aa6.73□□□□□ -1.33
HCR1YLR192C YIR014WP40570 242 aa6.73□□□□□ -1.33
HCR1YLR192C EEB1Q02891 456 aa6.73□□□□□ -1.33
HCR1YLR192C MAG2Q06436 670 aaKnown RBP6.73□□□□□ -1.33
HCR1YLR192C BRE4Q07660 1125 aa6.73□□□□□ -1.33
HCR1YLR192C YDR034W-BQ6Q5X2 51 aa6.73□□□□□ -1.33
HCR1YLR192C FAS2P19097 1887 aaKnown RBP6.73□□□□□ -1.33
HCR1YLR192C RAD27P26793 382 aa6.72□□□□□ -1.33
HCR1YLR192C ICL1P28240 557 aaPredicted RBP6.72□□□□□ -1.33
HCR1YLR192C PFF1P38244 976 aa6.72□□□□□ -1.33
HCR1YLR192C NMD2P38798 1089 aaKnown RBP6.72□□□□□ -1.33
HCR1YLR192C GPB2P39717 880 aa6.72□□□□□ -1.33
HCR1YLR192C SYF1Q04048 859 aaPredicted RBP6.72□□□□□ -1.33
HCR1YLR192C SVF1Q05515 481 aa6.72□□□□□ -1.33
HCR1YLR192C BDF2Q07442 638 aa6.72□□□□□ -1.33
HCR1YLR192C HRK1Q08732 759 aaKnown RBP6.72□□□□□ -1.33
HCR1YLR192C TRE1Q08919 783 aa6.72□□□□□ -1.33
HCR1YLR192C NCB2Q92317 146 aa6.72□□□□□ -1.33
HCR1YLR192C CDC16P09798 840 aa6.71□□□□□ -1.34
HCR1YLR192C SAM35P14693 329 aa6.71□□□□□ -1.34
HCR1YLR192C PAH1P32567 862 aa6.71□□□□□ -1.34
HCR1YLR192C APE3P37302 537 aaKnown RBP6.71□□□□□ -1.34
HCR1YLR192C YHR131CP38835 850 aa6.71□□□□□ -1.34
HCR1YLR192C FCP1Q03254 732 aa6.71□□□□□ -1.34
HCR1YLR192C VPS16Q03308 798 aa6.71□□□□□ -1.34
HCR1YLR192C TMA46Q12000 345 aaKnown RBP6.71□□□□□ -1.34
HCR1YLR192C CSR2Q12734 1121 aa6.71□□□□□ -1.34
HCR1YLR192C RIM15P43565 1770 aa6.7□□□□□ -1.34
HCR1YLR192C FIG2P25653 1609 aa6.7□□□□□ -1.34
HCR1YLR192C DBP5P20449 482 aaKnown RBP6.7□□□□□ -1.34
HCR1YLR192C LIP5P32875 414 aa6.7□□□□□ -1.34
HCR1YLR192C SSY1Q03770 852 aa6.7□□□□□ -1.34
HCR1YLR192C CTI6Q08923 506 aa6.7□□□□□ -1.34
HCR1YLR192C PIN2Q12057 282 aa6.7□□□□□ -1.34
HCR1YLR192C SNU66Q12420 587 aaPredicted RBP6.7□□□□□ -1.34
HCR1YLR192C YSC84P32793 468 aa6.69□□□□□ -1.34
HCR1YLR192C NUG1P40010 520 aaKnown RBP6.69□□□□□ -1.34
HCR1YLR192C CNN1P43618 361 aa6.69□□□□□ -1.34
HCR1YLR192C FAA4P47912 694 aaKnown RBP6.69□□□□□ -1.34
HCR1YLR192C EAF7P53911 425 aaKnown RBP6.69□□□□□ -1.34
HCR1YLR192C TIF35Q04067 274 aaKnown RBP6.69□□□□□ -1.34
HCR1YLR192C IRC3Q06683 689 aa6.69□□□□□ -1.34
HCR1YLR192C RCL1Q08096 367 aaPredicted RBP6.69□□□□□ -1.34
HCR1YLR192C RAD50P12753 1312 aa6.69□□□□□ -1.34
HCR1YLR192C MLS1P30952 554 aa6.68□□□□□ -1.34
HCR1YLR192C PRO1P32264 428 aa6.68□□□□□ -1.34
HCR1YLR192C SMY1P32364 656 aaKnown RBP6.68□□□□□ -1.34
HCR1YLR192C IME2P32581 645 aa6.68□□□□□ -1.34
HCR1YLR192C OPY1P38271 328 aa6.68□□□□□ -1.34
HCR1YLR192C RFC1P38630 861 aaKnown RBP6.68□□□□□ -1.34
HCR1YLR192C YHL012WP38709 493 aa6.68□□□□□ -1.34
HCR1YLR192C MPH1P40562 993 aa6.68□□□□□ -1.34
HCR1YLR192C YGR053CP53234 283 aa6.68□□□□□ -1.34
HCR1YLR192C UBP16Q02863 499 aa6.68□□□□□ -1.34
HCR1YLR192C ERO1Q03103 563 aa6.68□□□□□ -1.34
HCR1YLR192C SPO21Q12411 609 aa6.68□□□□□ -1.34
HCR1YLR192C NSI1Q12457 570 aa6.68□□□□□ -1.34
HCR1YLR192C ADR1P07248 1323 aa6.68□□□□□ -1.34
HCR1YLR192C TRP2P00899 507 aaKnown RBP6.67□□□□□ -1.34
HCR1YLR192C LYP1P32487 611 aa6.67□□□□□ -1.34
HCR1YLR192C RGD1P38339 666 aa6.67□□□□□ -1.34
HCR1YLR192C PTC7P38797 343 aa6.67□□□□□ -1.34
HCR1YLR192C MAD1P40957 749 aa6.67□□□□□ -1.34
HCR1YLR192C YGL242CP53066 181 aa6.67□□□□□ -1.34
HCR1YLR192C UBX2Q04228 584 aa6.67□□□□□ -1.34
HCR1YLR192C YPL260WQ08977 551 aa6.67□□□□□ -1.34
HCR1YLR192C NOT3P06102 836 aaKnown RBP6.66□□□□□ -1.34
HCR1YLR192C PIF1P07271 859 aa6.66□□□□□ -1.34
HCR1YLR192C YER152CP10356 443 aa6.66□□□□□ -1.34
HCR1YLR192C GTS1P40956 396 aa6.66□□□□□ -1.34
HCR1YLR192C MLC1P53141 149 aa6.66□□□□□ -1.34
HCR1YLR192C NRD1P53617 575 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
HCR1YLR192C TIM50Q02776 476 aa6.66□□□□□ -1.34
HCR1YLR192C GDE1Q02979 1223 aa6.66□□□□□ -1.34
HCR1YLR192C NKP2Q06162 153 aa6.66□□□□□ -1.34
HCR1YLR192C SEC18P18759 758 aaKnown RBP6.65□□□□□ -1.34
HCR1YLR192C CLN2P20438 545 aa6.65□□□□□ -1.34
HCR1YLR192C ADP1P25371 1049 aa6.65□□□□□ -1.34
HCR1YLR192C YKU70P32807 602 aa6.65□□□□□ -1.34
HCR1YLR192C ECM21P38167 1117 aaKnown RBP6.65□□□□□ -1.34
HCR1YLR192C YFL054CP43549 646 aa6.65□□□□□ -1.34
HCR1YLR192C TYW3P53177 273 aa6.65□□□□□ -1.34
HCR1YLR192C HOS3Q02959 697 aaKnown RBP6.65□□□□□ -1.34
HCR1YLR192C LPX1Q12405 387 aaKnown RBP6.65□□□□□ -1.34
HCR1YLR192C PUF4P25339 888 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
HCR1YLR192C KRE2P27809 442 aa6.64□□□□□ -1.35
HCR1YLR192C FRD1P32614 470 aaKnown RBP6.64□□□□□ -1.35
HCR1YLR192C MDL2P33311 773 aa6.64□□□□□ -1.35
HCR1YLR192C MCM7P38132 845 aa6.64□□□□□ -1.35
HCR1YLR192C OSH3P38713 996 aaKnown RBP6.64□□□□□ -1.35
HCR1YLR192C BRE1Q07457 700 aaKnown RBP6.64□□□□□ -1.35
HCR1YLR192C PSF3Q12146 194 aa6.64□□□□□ -1.35
HCR1YLR192C SNF5P18480 905 aa6.63□□□□□ -1.35
HCR1YLR192C MSM1P22438 575 aa6.63□□□□□ -1.35
HCR1YLR192C HSP78P33416 811 aa6.63□□□□□ -1.35
HCR1YLR192C BAP2P38084 609 aa6.63□□□□□ -1.35
HCR1YLR192C UTP10P42945 1769 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms