RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	NOP16	P40007	231 aa	Known RBP	4.38	□□□□□ -1.71
NUP133	YKR082W	MDR1	P53258	950 aa		4.38	□□□□□ -1.71
NUP133	YKR082W	DCP2	P53550	970 aa	Known RBP	4.38	□□□□□ -1.71
NUP133	YKR082W	YNR063W	P53749	607 aa		4.38	□□□□□ -1.71
NUP133	YKR082W	ARP5	P53946	755 aa		4.38	□□□□□ -1.71
NUP133	YKR082W	RSM28	Q03430	361 aa		4.38	□□□□□ -1.71
NUP133	YKR082W	PHO92	Q06390	306 aa		4.38	□□□□□ -1.71
NUP133	YKR082W	BRX1	Q08235	291 aa	Known RBP	4.38	□□□□□ -1.71
NUP133	YKR082W	IOC2	Q12072	812 aa		4.38	□□□□□ -1.71
NUP133	YKR082W	APC11	Q12157	165 aa		4.38	□□□□□ -1.71
NUP133	YKR082W	RIO1	Q12196	484 aa	Known RBP	4.38	□□□□□ -1.71
NUP133	YKR082W	STF1	P01098	86 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	ERR1	P0CX10	437 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	ERR2	P0CX11	437 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	APA1	P16550	321 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	YEL1	P34225	687 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	YIL161W	P40449	235 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	MET18	P40469	1032 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	QDR1	P40475	563 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	NPY1	P53164	384 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	PRO2	P54885	456 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	ARA2	Q04212	335 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	MGR3	Q04472	501 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	GSF2	Q04697	403 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	ESC2	Q06340	456 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	MLC2	Q06580	163 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	GYP1	Q08484	637 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	APL4	Q12028	832 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	SKS1	Q12505	502 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	YOR093C	Q12275	1648 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	KSS1	P14681	368 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	LCB1	P25045	558 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	SPB1	P25582	841 aa	Predicted RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	YEL043W	P32618	956 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	NAS2	P40555	220 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	MAD3	P47074	515 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	SAP4	P53036	818 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	GUP1	P53154	560 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	TDA9	Q04545	1251 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	MRPL40	P36534	297 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	VPS45	P38932	577 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	TGL3	P40308	642 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	SEC28	P40509	296 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	CCT7	P42943	550 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	AIP1	P46680	615 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	YGR122W	P53272	402 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	ULP1	Q02724	621 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	UME1	Q03010	460 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	MUB1	Q03162	620 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	DPB4	Q04603	196 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	NOP6	Q07623	225 aa	Known RBP	4.37	□□□□□ -1.71
NUP133	YKR082W	RAD59	Q12223	238 aa		4.37	□□□□□ -1.71
NUP133	YKR082W	YLR419W	Q06698	1435 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	CYC8	P14922	966 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	OCA4	P25366	362 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	RDH54	P38086	958 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	PBY1	P38254	753 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	OPY1	P38271	328 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	RLP7	P40693	322 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	ROG3	P43602	733 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	SMC3	P47037	1230 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	PKH3	Q03306	898 aa	Predicted RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	YDR131C	Q03899	556 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	THI73	Q07904	523 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	HSF1	P10961	833 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	PDX1	P16451	410 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	TPS2	P31688	896 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	MEI5	P32489	222 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	FBP26	P32604	452 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	PET112	P33893	541 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	SRP72	P38688	640 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	MSR1	P38714	643 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	TMN3	P40071	706 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	PKP1	P40530	394 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	CIA1	Q05583	330 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	VHS3	Q08438	674 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	TYW1	Q08960	810 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	FAL1	Q12099	399 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	ENT1	Q12518	454 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	MHP1	P43638	1398 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	MSS18	P08593	268 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	SEC21	P32074	935 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	RPT1	P33299	467 aa	Known RBP	4.36	□□□□□ -1.71
NUP133	YKR082W	FTH1	P38310	465 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	CIT3	P43635	486 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	MAL11	P53048	616 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	YGR067C	P53243	804 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	YOR019W	Q99248	730 aa		4.36	□□□□□ -1.71
NUP133	YKR082W	CMK1	P27466	446 aa	Known RBP	4.35	□□□□□ -1.71
NUP133	YKR082W	AFR1	P33304	620 aa		4.35	□□□□□ -1.71
NUP133	YKR082W	SET3	P36124	751 aa		4.35	□□□□□ -1.71
NUP133	YKR082W	RFC3	P38629	340 aa		4.35	□□□□□ -1.71
NUP133	YKR082W	TOM71	P38825	639 aa	Known RBP	4.35	□□□□□ -1.71
NUP133	YKR082W	YIL077C	P40508	320 aa		4.35	□□□□□ -1.71
NUP133	YKR082W	SNP1	Q00916	300 aa	Predicted RBP	4.35	□□□□□ -1.71
NUP133	YKR082W	PNP1	Q05788	311 aa		4.35	□□□□□ -1.71
NUP133	YKR082W	TSR1	Q07381	788 aa	Known RBP	4.35	□□□□□ -1.71
NUP133	YKR082W	YLR001C	Q07895	862 aa		4.35	□□□□□ -1.71
NUP133	YKR082W	SPO21	Q12411	609 aa		4.35	□□□□□ -1.71
NUP133	YKR082W	CAN1	P04817	590 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms