RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeastyeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP133YKR082W RQC2Q12532 1038 aaKnown RBP7.31□□□□□ -1.24
NUP133YKR082W DRS1P32892 752 aaKnown RBP6.89□□□□□ -1.31
NUP133YKR082W TFA1P36100 482 aa6.88□□□□□ -1.31
NUP133YKR082W TAF7Q05021 590 aa6.83□□□□□ -1.32
NUP133YKR082W BFR2Q06631 534 aaKnown RBP6.45□□□□□ -1.38
NUP133YKR082W LEO1P38439 464 aa6.15□□□□□ -1.43
NUP133YKR082W URN1Q06525 465 aaKnown RBP6.09□□□□□ -1.43
NUP133YKR082W MTC1P47018 478 aaKnown RBP5.96□□□□□ -1.46
NUP133YKR082W NAP1P25293 417 aaKnown RBP5.95□□□□□ -1.46
NUP133YKR082W DMA1P38823 416 aa5.94□□□□□ -1.46
NUP133YKR082W AVT3P36062 692 aa5.91□□□□□ -1.46
NUP133YKR082W IOC4Q04213 475 aa5.83□□□□□ -1.48
NUP133YKR082W YRB30P53107 440 aaPredicted RBP5.81□□□□□ -1.48
NUP133YKR082W IFH1P39520 1085 aa5.8□□□□□ -1.48
NUP133YKR082W AIM44Q99299 758 aa5.79□□□□□ -1.48
NUP133YKR082W ORC1P54784 914 aaPredicted RBP5.71□□□□□ -1.49
NUP133YKR082W SIS2P36024 562 aa5.68□□□□□ -1.5
NUP133YKR082W YFR016CP43597 1233 aaKnown RBP5.68□□□□□ -1.5
NUP133YKR082W LEU3P08638 886 aa5.68□□□□□ -1.5
NUP133YKR082W TOP1P04786 769 aa5.65□□□□□ -1.51
NUP133YKR082W DIP2Q12220 943 aaPredicted RBP5.61□□□□□ -1.51
NUP133YKR082W KRI1P42846 591 aaKnown RBP5.61□□□□□ -1.51
NUP133YKR082W SNU71P53207 620 aaKnown RBP5.58□□□□□ -1.52
NUP133YKR082W SGS1P35187 1447 aa5.58□□□□□ -1.52
NUP133YKR082W ABP1P15891 592 aaKnown RBP5.56□□□□□ -1.52
NUP133YKR082W CAB3P36076 571 aa5.55□□□□□ -1.52
NUP133YKR082W EBP2P36049 427 aaKnown RBP5.55□□□□□ -1.52
NUP133YKR082W MNN4P36044 1178 aa5.53□□□□□ -1.52
NUP133YKR082W RPS0BP46654 252 aaKnown RBP5.53□□□□□ -1.52
NUP133YKR082W SAS10Q12136 610 aaPredicted RBP5.52□□□□□ -1.53
NUP133YKR082W RLF2Q12495 606 aa5.51□□□□□ -1.53
NUP133YKR082W DMA2P53924 522 aa5.48□□□□□ -1.53
NUP133YKR082W SPA2P23201 1466 aaKnown RBP5.45□□□□□ -1.54
NUP133YKR082W CWC22P53333 577 aaKnown RBP5.43□□□□□ -1.54
NUP133YKR082W SSN2P38931 1420 aa5.42□□□□□ -1.54
NUP133YKR082W RLP24Q07915 199 aaKnown RBP5.4□□□□□ -1.54
NUP133YKR082W SWE1P32944 819 aa5.4□□□□□ -1.55
NUP133YKR082W PSH1Q12161 406 aa5.38□□□□□ -1.55
NUP133YKR082W INO80P53115 1489 aa5.38□□□□□ -1.55
NUP133YKR082W RPN1P38764 993 aaKnown RBP5.37□□□□□ -1.55
NUP133YKR082W NOP8Q08287 484 aaPredicted RBP5.37□□□□□ -1.55
NUP133YKR082W GIN4Q12263 1142 aa5.37□□□□□ -1.55
NUP133YKR082W ATG36P46983 293 aa5.36□□□□□ -1.55
NUP133YKR082W MDG1P53885 366 aa5.36□□□□□ -1.55
NUP133YKR082W TOA1P32773 286 aa5.32□□□□□ -1.56
NUP133YKR082W NUG1P40010 520 aaKnown RBP5.32□□□□□ -1.56
NUP133YKR082W BRL1P38770 471 aa5.31□□□□□ -1.56
NUP133YKR082W SUB1P54000 292 aaKnown RBP5.31□□□□□ -1.56
NUP133YKR082W DEF1P35732 738 aaKnown RBP5.3□□□□□ -1.56
NUP133YKR082W ASF1P32447 279 aa5.3□□□□□ -1.56
NUP133YKR082W TPO2P53283 614 aa5.29□□□□□ -1.56
NUP133YKR082W DOS2P54858 310 aa5.29□□□□□ -1.56
NUP133YKR082W OSW7P43611 510 aa5.28□□□□□ -1.56
NUP133YKR082W VPS72Q03388 795 aa5.28□□□□□ -1.56
NUP133YKR082W YML020WQ03722 664 aa5.28□□□□□ -1.56
NUP133YKR082W CKB1P43639 278 aa5.27□□□□□ -1.57
NUP133YKR082W TCB3Q03640 1545 aaKnown RBP5.26□□□□□ -1.57
NUP133YKR082W FAR11P53917 953 aa5.26□□□□□ -1.57
NUP133YKR082W HIF1Q12373 385 aa5.23□□□□□ -1.57
NUP133YKR082W TY1B-DR4Q07793 1604 aa5.23□□□□□ -1.57
NUP133YKR082W LAM6Q08001 693 aa5.22□□□□□ -1.57
NUP133YKR082W NAB3P38996 802 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
NUP133YKR082W RPS0AP32905 252 aaKnown RBP5.18□□□□□ -1.58
NUP133YKR082W ISW1P38144 1129 aa5.18□□□□□ -1.58
NUP133YKR082W NOP7P53261 605 aaKnown RBP5.17□□□□□ -1.58
NUP133YKR082W HSL1P34244 1518 aa5.17□□□□□ -1.58
NUP133YKR082W SPC42P36094 363 aa5.17□□□□□ -1.58
NUP133YKR082W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58 RIP-Chip
NUP133YKR082W SLX8P40072 274 aa5.16□□□□□ -1.58
NUP133YKR082W RTS3P53289 263 aa5.16□□□□□ -1.58
NUP133YKR082W SSA1P10591 642 aaKnown RBP5.16□□□□□ -1.58
NUP133YKR082W SSA2P10592 639 aaKnown RBP5.16□□□□□ -1.58
NUP133YKR082W BRN1P38170 754 aa5.15□□□□□ -1.58
NUP133YKR082W PTP3P40048 928 aa5.15□□□□□ -1.58
NUP133YKR082W PAM1P37304 830 aaKnown RBP5.15□□□□□ -1.59
NUP133YKR082W SSF1P38789 453 aaPredicted RBP5.15□□□□□ -1.59
NUP133YKR082W YTA7P40340 1379 aa5.15□□□□□ -1.59
NUP133YKR082W QCR6P00127 147 aa5.14□□□□□ -1.59
NUP133YKR082W GEF1P37020 779 aa5.14□□□□□ -1.59
NUP133YKR082W SSP1P38871 571 aa5.14□□□□□ -1.59
NUP133YKR082W SPT6P23615 1451 aaKnown RBP5.13□□□□□ -1.59
NUP133YKR082W MRX12P47084 519 aa5.13□□□□□ -1.59
NUP133YKR082W PDR1P12383 1068 aa5.13□□□□□ -1.59
NUP133YKR082W NOP2P40991 618 aaKnown RBP5.12□□□□□ -1.59
NUP133YKR082W NHA1Q99271 985 aa5.12□□□□□ -1.59
NUP133YKR082W RNA1P11745 407 aaKnown RBP5.11□□□□□ -1.59
NUP133YKR082W BRE1Q07457 700 aaKnown RBP5.11□□□□□ -1.59
NUP133YKR082W BUD21Q08492 214 aaPredicted RBP5.11□□□□□ -1.59
NUP133YKR082W SPT2P06843 333 aaPredicted RBP5.1□□□□□ -1.59
NUP133YKR082W FPR3P38911 411 aaKnown RBP5.1□□□□□ -1.59
NUP133YKR082W OCA5P38738 679 aa5.1□□□□□ -1.59
NUP133YKR082W ZDS1P50111 915 aaKnown RBP5.09□□□□□ -1.59
NUP133YKR082W HIR3P47171 1648 aa5.09□□□□□ -1.59
NUP133YKR082W RAD2P07276 1031 aa5.09□□□□□ -1.6
NUP133YKR082W ENV11P53246 860 aa5.09□□□□□ -1.6
NUP133YKR082W KIP3P53086 805 aaKnown RBP5.08□□□□□ -1.6
NUP133YKR082W XRN1P22147 1528 aaKnown RBP5.08□□□□□ -1.6
NUP133YKR082W HOS4P40480 1083 aa5.07□□□□□ -1.6
NUP133YKR082W MPP10P47083 593 aaKnown RBP5.07□□□□□ -1.6
NUP133YKR082W YJR008WP47085 338 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms