RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C ERG5P54781 538 aa3.33□□□□□ -1.88
SHE2YKL130C DLT1Q04216 342 aa3.33□□□□□ -1.88
SHE2YKL130C SWM1Q12379 170 aa3.33□□□□□ -1.88
SHE2YKL130C PEX2P32800 271 aa3.32□□□□□ -1.88
SHE2YKL130C CTF13P35203 478 aa3.32□□□□□ -1.88
SHE2YKL130C YRO2P38079 344 aa3.32□□□□□ -1.88
SHE2YKL130C YBR238CP38330 731 aaKnown RBP3.32□□□□□ -1.88
SHE2YKL130C SDP1P40479 209 aa3.32□□□□□ -1.88
SHE2YKL130C SDS3P40505 327 aa3.32□□□□□ -1.88
SHE2YKL130C MAD1P40957 749 aa3.32□□□□□ -1.88
SHE2YKL130C DAS1P47005 663 aa3.32□□□□□ -1.88
SHE2YKL130C YKE2P52553 114 aa3.32□□□□□ -1.88
SHE2YKL130C ORC1P54784 914 aaPredicted RBP3.32□□□□□ -1.88
SHE2YKL130C TRM11Q12463 433 aa3.32□□□□□ -1.88
SHE2YKL130C PRI2P20457 528 aa3.31□□□□□ -1.88
SHE2YKL130C YHL017WP38745 532 aa3.31□□□□□ -1.88
SHE2YKL130C ELO3P40319 345 aa3.31□□□□□ -1.88
SHE2YKL130C VPS16Q03308 798 aa3.31□□□□□ -1.88
SHE2YKL130C SHE9Q04172 456 aa3.31□□□□□ -1.88
SHE2YKL130C MRH1Q12117 320 aaPredicted RBP3.31□□□□□ -1.88
SHE2YKL130C FBP1P09201 348 aa3.3□□□□□ -1.88
SHE2YKL130C CAF20P12962 161 aaKnown RBP3.3□□□□□ -1.88
SHE2YKL130C TYE7P33122 291 aaPredicted RBP3.3□□□□□ -1.88
SHE2YKL130C CEP3P40969 608 aa3.3□□□□□ -1.88
SHE2YKL130C TPO2P53283 614 aa3.3□□□□□ -1.88
SHE2YKL130C OPI10Q08202 246 aa3.3□□□□□ -1.88
SHE2YKL130C TUB3P09734 445 aaKnown RBP3.29□□□□□ -1.88
SHE2YKL130C AFR1P33304 620 aa3.29□□□□□ -1.88
SHE2YKL130C RPP1P38786 293 aa3.29□□□□□ -1.88
SHE2YKL130C CTF8P38877 133 aa3.29□□□□□ -1.88
SHE2YKL130C FKH2P41813 862 aa3.29□□□□□ -1.88
SHE2YKL130C YKR011CQ02209 353 aa3.29□□□□□ -1.88
SHE2YKL130C SVF1Q05515 481 aa3.29□□□□□ -1.88
SHE2YKL130C CRR1Q05790 422 aa3.29□□□□□ -1.88
SHE2YKL130C ADY4Q05955 493 aa3.29□□□□□ -1.88
SHE2YKL130C NDJ1Q12366 352 aa3.29□□□□□ -1.88
SHE2YKL130C RPS9AO13516 197 aaKnown RBP3.28□□□□□ -1.88
SHE2YKL130C NAP1P25293 417 aaKnown RBP3.28□□□□□ -1.88
SHE2YKL130C MRP8P35719 219 aa3.28□□□□□ -1.88
SHE2YKL130C YKL069WP36088 180 aa3.28□□□□□ -1.88
SHE2YKL130C CCM1P48237 864 aaPredicted RBP3.28□□□□□ -1.88
SHE2YKL130C MUP1P50276 574 aa3.28□□□□□ -1.88
SHE2YKL130C GFA1P14742 717 aaKnown RBP3.27□□□□□ -1.89
SHE2YKL130C PPZ2P33329 710 aa3.27□□□□□ -1.89
SHE2YKL130C ERT1P38140 529 aa3.27□□□□□ -1.89
SHE2YKL130C TDP1P38319 544 aa3.27□□□□□ -1.89
SHE2YKL130C YHR078WP38799 552 aa3.27□□□□□ -1.89
SHE2YKL130C PUS2P53167 370 aa3.27□□□□□ -1.89
SHE2YKL130C HDA1P53973 706 aa3.27□□□□□ -1.89
SHE2YKL130C PIN2Q12057 282 aa3.27□□□□□ -1.89
SHE2YKL130C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SHE2YKL130C CDC43P18898 376 aa3.26□□□□□ -1.89
SHE2YKL130C URA1P28272 314 aaPredicted RBP3.26□□□□□ -1.89
SHE2YKL130C PBY1P38254 753 aa3.26□□□□□ -1.89
SHE2YKL130C PCL5P38794 229 aa3.26□□□□□ -1.89
SHE2YKL130C SIT1P39980 628 aa3.26□□□□□ -1.89
SHE2YKL130C VHR1P40522 640 aa3.26□□□□□ -1.89
SHE2YKL130C JIP5Q06214 492 aaPredicted RBP3.26□□□□□ -1.89
SHE2YKL130C BNR1P40450 1375 aa3.25□□□□□ -1.89
SHE2YKL130C HCA4P20448 770 aaKnown RBP3.25□□□□□ -1.89
SHE2YKL130C REC104P33323 182 aa3.25□□□□□ -1.89
SHE2YKL130C TOK1P40310 691 aa3.25□□□□□ -1.89
SHE2YKL130C MRPS35P53292 345 aa3.25□□□□□ -1.89
SHE2YKL130C PKH1Q03407 766 aa3.25□□□□□ -1.89
SHE2YKL130C LCD1Q04377 747 aa3.25□□□□□ -1.89
SHE2YKL130C SUT2Q12286 268 aa3.25□□□□□ -1.89
SHE2YKL130C PRP9P19736 530 aaKnown RBP3.24□□□□□ -1.89
SHE2YKL130C IRR1P40541 1150 aa3.24□□□□□ -1.89
SHE2YKL130C YJL163CP46996 555 aa3.24□□□□□ -1.89
SHE2YKL130C AMA1P50082 593 aa3.24□□□□□ -1.89
SHE2YKL130C PRP4P20053 465 aaKnown RBP3.23□□□□□ -1.89
SHE2YKL130C KIN3P22209 435 aa3.23□□□□□ -1.89
SHE2YKL130C NGG1P32494 702 aa3.23□□□□□ -1.89
SHE2YKL130C YBR053CP38235 358 aa3.23□□□□□ -1.89
SHE2YKL130C RIX1P38883 763 aaPredicted RBP3.23□□□□□ -1.89
SHE2YKL130C TAH11P47112 604 aa3.23□□□□□ -1.89
SHE2YKL130C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SHE2YKL130C NNF1P47149 201 aa3.23□□□□□ -1.89
SHE2YKL130C VPS73P53142 486 aaKnown RBP3.23□□□□□ -1.89
SHE2YKL130C BUL2Q03758 920 aaKnown RBP3.23□□□□□ -1.89
SHE2YKL130C YPR071WQ12346 211 aa3.23□□□□□ -1.89
SHE2YKL130C YTA7P40340 1379 aa3.23□□□□□ -1.89
SHE2YKL130C TUB1P09733 447 aaKnown RBP3.22□□□□□ -1.89
SHE2YKL130C MDM10P18409 493 aa3.22□□□□□ -1.89
SHE2YKL130C HBS1P32769 611 aaKnown RBP3.22□□□□□ -1.89
SHE2YKL130C YBR284WP38150 797 aa3.22□□□□□ -1.89
SHE2YKL130C PZF1P39933 429 aa3.22□□□□□ -1.89
SHE2YKL130C IMO32P53219 342 aa3.22□□□□□ -1.89
SHE2YKL130C DUS1P53759 423 aaKnown RBP3.22□□□□□ -1.89
SHE2YKL130C RIA1P53893 1110 aa3.22□□□□□ -1.89
SHE2YKL130C ASI2P53895 289 aa3.22□□□□□ -1.89
SHE2YKL130C MET6P05694 767 aaKnown RBP3.21□□□□□ -1.9
SHE2YKL130C MPH2P0CD99 609 aa3.21□□□□□ -1.9
SHE2YKL130C CYS3P31373 394 aaKnown RBP3.21□□□□□ -1.9
SHE2YKL130C CDC11P32458 415 aa3.21□□□□□ -1.9
SHE2YKL130C CBR1P38626 284 aaKnown RBP3.21□□□□□ -1.9
SHE2YKL130C OCA5P38738 679 aa3.21□□□□□ -1.9
SHE2YKL130C VAC8P39968 578 aa3.21□□□□□ -1.9
SHE2YKL130C NRG1Q03125 231 aa3.21□□□□□ -1.9
SHE2YKL130C TDA5Q06417 326 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms