RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C SSF2Q12153 453 aaPredicted RBP4.3□□□□□ -1.72
SGN1YIR001C SES1P07284 462 aaKnown RBP4.29□□□□□ -1.72
SGN1YIR001C URK1P27515 501 aa4.29□□□□□ -1.72
SGN1YIR001C SYN8P31377 255 aa4.29□□□□□ -1.72
SGN1YIR001C ISC10P32645 267 aa4.29□□□□□ -1.72
SGN1YIR001C SMY2P32909 740 aaKnown RBP4.29□□□□□ -1.72
SGN1YIR001C GIP1P38229 639 aa4.29□□□□□ -1.72
SGN1YIR001C NDT80P38830 627 aa4.29□□□□□ -1.72
SGN1YIR001C TPM2P40414 161 aa4.29□□□□□ -1.72
SGN1YIR001C CCT8P47079 568 aaKnown RBP4.29□□□□□ -1.72
SGN1YIR001C PTA1Q01329 785 aaPredicted RBP4.29□□□□□ -1.72
SGN1YIR001C SPO71Q03868 1245 aa4.29□□□□□ -1.72
SGN1YIR001C ECM16Q04217 1267 aaKnown RBP4.29□□□□□ -1.72
SGN1YIR001C SPN1Q06505 410 aaPredicted RBP4.29□□□□□ -1.72
SGN1YIR001C YLR422WQ06409 1932 aa4.29□□□□□ -1.72
SGN1YIR001C POL3P15436 1097 aa4.28□□□□□ -1.72
SGN1YIR001C MAK31P23059 88 aa4.28□□□□□ -1.72
SGN1YIR001C TVP38P36164 337 aa4.28□□□□□ -1.72
SGN1YIR001C ISW1P38144 1129 aa4.28□□□□□ -1.72
SGN1YIR001C ALG2P43636 503 aa4.28□□□□□ -1.72
SGN1YIR001C PSP2P50109 593 aaKnown RBP4.28□□□□□ -1.72
SGN1YIR001C INP52P50942 1183 aa4.28□□□□□ -1.72
SGN1YIR001C MET13P53128 600 aa4.28□□□□□ -1.72
SGN1YIR001C MDM1Q01846 1127 aa4.28□□□□□ -1.72
SGN1YIR001C LCD1Q04377 747 aa4.28□□□□□ -1.72
SGN1YIR001C MAG2Q06436 670 aaKnown RBP4.28□□□□□ -1.72
SGN1YIR001C RSC2Q06488 889 aa4.28□□□□□ -1.72
SGN1YIR001C THI72Q08579 599 aa4.28□□□□□ -1.72
SGN1YIR001C FUR4P05316 633 aaKnown RBP4.27□□□□□ -1.73
SGN1YIR001C CDC16P09798 840 aa4.27□□□□□ -1.73
SGN1YIR001C UGA4P32837 571 aa4.27□□□□□ -1.73
SGN1YIR001C RER2P35196 286 aa4.27□□□□□ -1.73
SGN1YIR001C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SGN1YIR001C DID4P36108 232 aa4.27□□□□□ -1.73
SGN1YIR001C CRG1P38892 291 aaRIP-Chip data4.27□□□□□ -1.73not detected
SGN1YIR001C HMF1P40037 129 aaKnown RBP4.27□□□□□ -1.73
SGN1YIR001C YFL066CP43538 392 aa4.27□□□□□ -1.73
SGN1YIR001C CTR1P49573 406 aa4.27□□□□□ -1.73
SGN1YIR001C ART5P53244 586 aaKnown RBP4.27□□□□□ -1.73
SGN1YIR001C YNL034WP53963 612 aa4.27□□□□□ -1.73
SGN1YIR001C HDA1P53973 706 aa4.27□□□□□ -1.73
SGN1YIR001C YNL018CP53976 612 aa4.27□□□□□ -1.73
SGN1YIR001C MYO5Q04439 1219 aaKnown RBP4.27□□□□□ -1.73
SGN1YIR001C MMR1Q06324 491 aa4.27□□□□□ -1.73
SGN1YIR001C VIP1Q06685 1146 aaKnown RBP4.27□□□□□ -1.73
SGN1YIR001C GPI13Q07830 1017 aa4.27□□□□□ -1.73
SGN1YIR001C LSO1Q3E827 93 aa4.27□□□□□ -1.73
SGN1YIR001C MSD1P15179 658 aaKnown RBP4.26□□□□□ -1.73
SGN1YIR001C MSS51P32335 436 aa4.26□□□□□ -1.73
SGN1YIR001C DRE2P36152 348 aa4.26□□□□□ -1.73
SGN1YIR001C APN2P38207 520 aa4.26□□□□□ -1.73
SGN1YIR001C MCX1P38323 520 aaPredicted RBP4.26□□□□□ -1.73
SGN1YIR001C FAF1P40546 346 aaPredicted RBP4.26□□□□□ -1.73
SGN1YIR001C MDR1P53258 950 aa4.26□□□□□ -1.73
SGN1YIR001C DSE3Q08729 430 aa4.26□□□□□ -1.73
SGN1YIR001C OXR1Q08952 273 aa4.26□□□□□ -1.73
SGN1YIR001C APC11Q12157 165 aa4.26□□□□□ -1.73
SGN1YIR001C YPR053CQ6Q5F3 151 aa4.26□□□□□ -1.73
SGN1YIR001C LAA1P39526 2014 aa4.26□□□□□ -1.73
SGN1YIR001C PRC1P00729 532 aa4.25□□□□□ -1.73
SGN1YIR001C VAS1P07806 1104 aaKnown RBP4.25□□□□□ -1.73
SGN1YIR001C SRP54P20424 541 aaKnown RBP4.25□□□□□ -1.73
SGN1YIR001C UBC1P21734 215 aaKnown RBP4.25□□□□□ -1.73
SGN1YIR001C KIN82P25341 720 aa4.25□□□□□ -1.73
SGN1YIR001C IMP2'P32351 346 aa4.25□□□□□ -1.73
SGN1YIR001C YEL025CP39991 1188 aa4.25□□□□□ -1.73
SGN1YIR001C CSM2P40465 213 aa4.25□□□□□ -1.73
SGN1YIR001C PRK1P40494 810 aa4.25□□□□□ -1.73
SGN1YIR001C HXT8P40886 569 aa4.25□□□□□ -1.73
SGN1YIR001C OPT1P40897 799 aa4.25□□□□□ -1.73
SGN1YIR001C HUL4P40985 892 aa4.25□□□□□ -1.73
SGN1YIR001C YLR455WQ06188 304 aa4.25□□□□□ -1.73
SGN1YIR001C FPR4Q06205 392 aaPredicted RBP4.25□□□□□ -1.73
SGN1YIR001C RIM20Q12033 661 aa4.25□□□□□ -1.73
SGN1YIR001C SLP1Q12232 587 aa4.25□□□□□ -1.73
SGN1YIR001C SBP1P10080 294 aaKnown RBP4.24□□□□□ -1.73
SGN1YIR001C TPM1P17536 199 aaKnown RBP4.24□□□□□ -1.73
SGN1YIR001C PPZ1P26570 692 aa4.24□□□□□ -1.73
SGN1YIR001C RME1P32338 300 aaKnown RBP4.24□□□□□ -1.73
SGN1YIR001C NAB2P32505 525 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73 RIP-Chip
SGN1YIR001C SMC1P32908 1225 aa4.24□□□□□ -1.73
SGN1YIR001C BUD2P33314 1104 aa4.24□□□□□ -1.73
SGN1YIR001C PAN5P38787 379 aa4.24□□□□□ -1.73
SGN1YIR001C BUD16P39988 312 aa4.24□□□□□ -1.73
SGN1YIR001C MMF1P40185 145 aaKnown RBP4.24□□□□□ -1.73
SGN1YIR001C ASE1P50275 885 aa4.24□□□□□ -1.73
SGN1YIR001C PNG1Q02890 363 aa4.24□□□□□ -1.73
SGN1YIR001C NKP2Q06162 153 aa4.24□□□□□ -1.73
SGN1YIR001C EST2Q06163 884 aa4.24□□□□□ -1.73
SGN1YIR001C TFC6Q06339 672 aa4.24□□□□□ -1.73
SGN1YIR001C ARP6Q12509 438 aa4.24□□□□□ -1.73
SGN1YIR001C NHA1Q99271 985 aa4.24□□□□□ -1.73
SGN1YIR001C CIT1P00890 479 aa4.23□□□□□ -1.73
SGN1YIR001C MSN1P22148 382 aa4.23□□□□□ -1.73
SGN1YIR001C SLX1P38324 304 aa4.23□□□□□ -1.73
SGN1YIR001C SUL1P38359 859 aa4.23□□□□□ -1.73
SGN1YIR001C SBE2P42223 864 aaKnown RBP4.23□□□□□ -1.73
SGN1YIR001C ACF4P47129 309 aa4.23□□□□□ -1.73
SGN1YIR001C GCV2P49095 1034 aa4.23□□□□□ -1.73
SGN1YIR001C ZPR1P53303 486 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms