RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W RLP7P40693 322 aaKnown RBP8.41□□□□□ -1.06
YRF1-3YGR296W BCP1Q06338 283 aa8.41□□□□□ -1.06
YRF1-3YGR296W YOR059CQ08448 450 aaKnown RBP8.41□□□□□ -1.06
YRF1-3YGR296W VPS34P22543 875 aa8.41□□□□□ -1.06
YRF1-3YGR296W LIF1P53150 421 aa8.41□□□□□ -1.06
YRF1-3YGR296W SAC3P46674 1301 aa8.41□□□□□ -1.06
YRF1-3YGR296W YKR075CP36155 307 aa8.41□□□□□ -1.06
YRF1-3YGR296W VHR2P40041 505 aa8.41□□□□□ -1.06
YRF1-3YGR296W EPS1P40557 701 aa8.41□□□□□ -1.06
YRF1-3YGR296W NOG1Q02892 647 aaKnown RBP8.41□□□□□ -1.06
YRF1-3YGR296W SWI3P32591 825 aa8.41□□□□□ -1.06
YRF1-3YGR296W BUD2P33314 1104 aa8.41□□□□□ -1.06
YRF1-3YGR296W AIM21P40563 679 aa8.41□□□□□ -1.06
YRF1-3YGR296W HXT8P40886 569 aa8.41□□□□□ -1.06
YRF1-3YGR296W MNN11P46985 422 aaKnown RBP8.41□□□□□ -1.06
YRF1-3YGR296W RRP17Q04031 235 aaPredicted RBP8.41□□□□□ -1.06
YRF1-3YGR296W HFD1Q04458 532 aa8.41□□□□□ -1.06
YRF1-3YGR296W HIS2P38635 335 aa8.4□□□□□ -1.06
YRF1-3YGR296W YNL247WP53852 767 aaKnown RBP8.4□□□□□ -1.06
YRF1-3YGR296W EFM6P53970 246 aa8.4□□□□□ -1.06
YRF1-3YGR296W AAD15Q08361 143 aa8.4□□□□□ -1.06
YRF1-3YGR296W MUD1P32605 298 aaKnown RBP8.4□□□□□ -1.06
YRF1-3YGR296W CSE1P33307 960 aa8.4□□□□□ -1.06
YRF1-3YGR296W THI20Q08224 551 aa8.4□□□□□ -1.06
YRF1-3YGR296W ATP4P05626 244 aa8.4□□□□□ -1.06
YRF1-3YGR296W PCK1P10963 549 aa8.4□□□□□ -1.06
YRF1-3YGR296W AEP2P22136 580 aa8.4□□□□□ -1.06
YRF1-3YGR296W ALF1P53904 254 aa8.4□□□□□ -1.06
YRF1-3YGR296W GTB1Q04924 702 aa8.4□□□□□ -1.06
YRF1-3YGR296W YLR257WQ06146 321 aaKnown RBP8.4□□□□□ -1.06
YRF1-3YGR296W MRS2Q01926 470 aa8.4□□□□□ -1.07
YRF1-3YGR296W SPO19Q03029 223 aa8.4□□□□□ -1.07
YRF1-3YGR296W RAD53P22216 821 aa8.4□□□□□ -1.07
YRF1-3YGR296W SHE10P53075 577 aa8.4□□□□□ -1.07
YRF1-3YGR296W BRR1Q99177 341 aaPredicted RBP8.4□□□□□ -1.07
YRF1-3YGR296W PCH2P38126 564 aa8.39□□□□□ -1.07
YRF1-3YGR296W FTR1P40088 404 aa8.39□□□□□ -1.07
YRF1-3YGR296W YLR297WQ05899 129 aa8.39□□□□□ -1.07
YRF1-3YGR296W YJL070CP40361 888 aa8.39□□□□□ -1.07
YRF1-3YGR296W PUF3Q07807 879 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
YRF1-3YGR296W PPM2Q08282 695 aa8.39□□□□□ -1.07
YRF1-3YGR296W MET7Q08645 548 aa8.39□□□□□ -1.07
YRF1-3YGR296W APL4Q12028 832 aa8.39□□□□□ -1.07
YRF1-3YGR296W MCM16Q12262 181 aa8.39□□□□□ -1.07
YRF1-3YGR296W RPB4P20433 221 aaPredicted RBP8.39□□□□□ -1.07
YRF1-3YGR296W ZIP2P53061 704 aa8.39□□□□□ -1.07
YRF1-3YGR296W KAP114P53067 1004 aa8.39□□□□□ -1.07
YRF1-3YGR296W URH1Q04179 340 aa8.39□□□□□ -1.07
YRF1-3YGR296W DPL1Q05567 589 aa8.39□□□□□ -1.07
YRF1-3YGR296W MSH1P25846 959 aa8.39□□□□□ -1.07
YRF1-3YGR296W PET100P38958 111 aa8.39□□□□□ -1.07
YRF1-3YGR296W TEL2P53038 688 aa8.39□□□□□ -1.07
YRF1-3YGR296W LGE1Q02796 332 aaKnown RBP8.39□□□□□ -1.07
YRF1-3YGR296W SOV1Q04748 898 aa8.39□□□□□ -1.07
YRF1-3YGR296W CMD1P06787 147 aaKnown RBP8.38□□□□□ -1.07
YRF1-3YGR296W TCP1P12612 559 aaKnown RBP8.38□□□□□ -1.07
YRF1-3YGR296W CDC3P32457 520 aaKnown RBP8.38□□□□□ -1.07
YRF1-3YGR296W RAD5P32849 1169 aaPredicted RBP8.38□□□□□ -1.07
YRF1-3YGR296W MRS6P32864 603 aaKnown RBP8.38□□□□□ -1.07
YRF1-3YGR296W DAS1P47005 663 aa8.38□□□□□ -1.07
YRF1-3YGR296W IVY1Q04934 453 aa8.38□□□□□ -1.07
YRF1-3YGR296W YMR226CQ05016 267 aaKnown RBP8.38□□□□□ -1.07
YRF1-3YGR296W HMI1Q12039 706 aa8.38□□□□□ -1.07
YRF1-3YGR296W SPO12P17123 173 aa8.38□□□□□ -1.07
YRF1-3YGR296W CNN1P43618 361 aa8.38□□□□□ -1.07
YRF1-3YGR296W CIT3P43635 486 aa8.38□□□□□ -1.07
YRF1-3YGR296W LSG1P53145 640 aaKnown RBP8.38□□□□□ -1.07
YRF1-3YGR296W YPR097WQ06839 1073 aa8.38□□□□□ -1.07
YRF1-3YGR296W SPE3Q12074 293 aaKnown RBP8.38□□□□□ -1.07
YRF1-3YGR296W KNS1P32350 737 aaPredicted RBP8.38□□□□□ -1.07
YRF1-3YGR296W LIN1P38852 340 aaPredicted RBP8.38□□□□□ -1.07
YRF1-3YGR296W FRT2P39734 528 aa8.38□□□□□ -1.07
YRF1-3YGR296W SSL2Q00578 843 aa8.38□□□□□ -1.07
YRF1-3YGR296W TRM2P33753 639 aa8.38□□□□□ -1.07
YRF1-3YGR296W YKL100CP34248 587 aa8.38□□□□□ -1.07
YRF1-3YGR296W APM2P38700 605 aa8.37□□□□□ -1.07
YRF1-3YGR296W RPA49Q01080 415 aaPredicted RBP8.37□□□□□ -1.07
YRF1-3YGR296W PER1P25625 357 aa8.37□□□□□ -1.07
YRF1-3YGR296W GLN1P32288 370 aaKnown RBP8.37□□□□□ -1.07
YRF1-3YGR296W RFT1P38206 574 aaPredicted RBP8.37□□□□□ -1.07
YRF1-3YGR296W EMW1P42842 904 aaKnown RBP8.37□□□□□ -1.07
YRF1-3YGR296W CUL3P53202 744 aa8.37□□□□□ -1.07
YRF1-3YGR296W GUA1P38625 525 aaKnown RBP8.37□□□□□ -1.07
YRF1-3YGR296W DSE3Q08729 430 aa8.37□□□□□ -1.07
YRF1-3YGR296W RPS6AP0CX37 236 aaKnown RBP8.37□□□□□ -1.07
YRF1-3YGR296W RPS6BP0CX38 236 aaPredicted RBP8.37□□□□□ -1.07
YRF1-3YGR296W SHC1P39000 512 aa8.37□□□□□ -1.07
YRF1-3YGR296W TMA16Q08687 178 aa8.37□□□□□ -1.07
YRF1-3YGR296W HOS1Q12214 470 aa8.37□□□□□ -1.07
YRF1-3YGR296W MAM3Q12296 706 aa8.37□□□□□ -1.07
YRF1-3YGR296W SSE2P32590 693 aaKnown RBP8.36□□□□□ -1.07
YRF1-3YGR296W UBP6P43593 499 aaKnown RBP8.36□□□□□ -1.07
YRF1-3YGR296W FAR3P46671 204 aa8.36□□□□□ -1.07
YRF1-3YGR296W FUS2Q05670 677 aa8.36□□□□□ -1.07
YRF1-3YGR296W ESC8Q08119 714 aa8.36□□□□□ -1.07
YRF1-3YGR296W SBP1P10080 294 aaKnown RBP8.36□□□□□ -1.07
YRF1-3YGR296W SRB7P47822 140 aa8.36□□□□□ -1.07
YRF1-3YGR296W ERG5P54781 538 aa8.36□□□□□ -1.07
YRF1-3YGR296W IWR1Q07532 353 aaPredicted RBP8.36□□□□□ -1.07
YRF1-3YGR296W YER152CP10356 443 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms