RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W TFA2P36145 328 aa7.39□□□□□ -1.23
MSP1YGR028W AAP1P37898 856 aaKnown RBP7.39□□□□□ -1.23
MSP1YGR028W TOM71P38825 639 aaKnown RBP7.39□□□□□ -1.23
MSP1YGR028W CSM2P40465 213 aa7.39□□□□□ -1.23
MSP1YGR028W SCS3P53012 380 aa7.39□□□□□ -1.23
MSP1YGR028W DSE4P53753 1117 aa7.39□□□□□ -1.23
MSP1YGR028W SPO71Q03868 1245 aa7.39□□□□□ -1.23
MSP1YGR028W PMT7Q06644 662 aa7.39□□□□□ -1.23
MSP1YGR028W SSF2Q12153 453 aaPredicted RBP7.39□□□□□ -1.23
MSP1YGR028W YUR1P26725 428 aa7.38□□□□□ -1.23
MSP1YGR028W RER2P35196 286 aa7.38□□□□□ -1.23
MSP1YGR028W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
MSP1YGR028W RIM11P38615 370 aa7.38□□□□□ -1.23
MSP1YGR028W KSP1P38691 1029 aaKnown RBP7.38□□□□□ -1.23
MSP1YGR028W RVS167P39743 482 aaKnown RBP7.38□□□□□ -1.23
MSP1YGR028W NUT1P53114 1132 aa7.38□□□□□ -1.23
MSP1YGR028W YNR065CP53751 1116 aa7.38□□□□□ -1.23
MSP1YGR028W RPT6Q01939 405 aaKnown RBP7.38□□□□□ -1.23
MSP1YGR028W YVH1Q02256 364 aaKnown RBP7.38□□□□□ -1.23
MSP1YGR028W YPL034WQ03083 165 aa7.38□□□□□ -1.23
MSP1YGR028W YCS4Q06156 1176 aa7.38□□□□□ -1.23
MSP1YGR028W SPH1Q06160 661 aa7.38□□□□□ -1.23
MSP1YGR028W SPN1Q06505 410 aaPredicted RBP7.38□□□□□ -1.23
MSP1YGR028W ECM30Q06673 1274 aa7.38□□□□□ -1.23
MSP1YGR028W OXR1Q08952 273 aa7.38□□□□□ -1.23
MSP1YGR028W ERP3Q12403 225 aa7.38□□□□□ -1.23
MSP1YGR028W WHI5Q12416 295 aa7.38□□□□□ -1.23
MSP1YGR028W YPR117WQ06116 2489 aa7.37□□□□□ -1.23
MSP1YGR028W ASF1P32447 279 aa7.37□□□□□ -1.23
MSP1YGR028W SFA1P32771 386 aa7.37□□□□□ -1.23
MSP1YGR028W RRM3P38766 723 aa7.37□□□□□ -1.23
MSP1YGR028W SKN7P38889 622 aa7.37□□□□□ -1.23
MSP1YGR028W TED1P40533 473 aa7.37□□□□□ -1.23
MSP1YGR028W SKP2P42843 763 aa7.37□□□□□ -1.23
MSP1YGR028W CTR1P49573 406 aa7.37□□□□□ -1.23
MSP1YGR028W ECM16Q04217 1267 aaKnown RBP7.37□□□□□ -1.23
MSP1YGR028W RAD50P12753 1312 aa7.36□□□□□ -1.23
MSP1YGR028W PHR1P05066 565 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
MSP1YGR028W SRP54P20424 541 aaKnown RBP7.36□□□□□ -1.23
MSP1YGR028W NPR1P22211 790 aa7.36□□□□□ -1.23
MSP1YGR028W MAK31P23059 88 aa7.36□□□□□ -1.23
MSP1YGR028W MCR1P36060 302 aaKnown RBP7.36□□□□□ -1.23
MSP1YGR028W PAN5P38787 379 aa7.36□□□□□ -1.23
MSP1YGR028W CRG1P38892 291 aaRIP-Chip data7.36□□□□□ -1.23not detected
MSP1YGR028W NOC2P39744 710 aaKnown RBP7.36□□□□□ -1.23
MSP1YGR028W NEO1P40527 1151 aa7.36□□□□□ -1.23
MSP1YGR028W AIM21P40563 679 aa7.36□□□□□ -1.23
MSP1YGR028W LSB6P42951 607 aa7.36□□□□□ -1.23
MSP1YGR028W BUD9P53226 547 aa7.36□□□□□ -1.23
MSP1YGR028W MYO5Q04439 1219 aaKnown RBP7.36□□□□□ -1.23
MSP1YGR028W YMR321CQ04898 105 aa7.36□□□□□ -1.23
MSP1YGR028W TFC6Q06339 672 aa7.36□□□□□ -1.23
MSP1YGR028W HIP1P06775 603 aa7.35□□□□□ -1.23
MSP1YGR028W BRN1P38170 754 aa7.35□□□□□ -1.23
MSP1YGR028W PES4P39684 611 aa7.35□□□□□ -1.23
MSP1YGR028W CMR1Q12510 522 aaKnown RBP7.35□□□□□ -1.23
MSP1YGR028W MCM4P30665 933 aaKnown RBP7.34□□□□□ -1.23
MSP1YGR028W WHI3P34761 661 aaKnown RBP7.34□□□□□ -1.23
MSP1YGR028W DBP7P36120 742 aaKnown RBP7.34□□□□□ -1.23
MSP1YGR028W REG2P38232 338 aa7.34□□□□□ -1.23
MSP1YGR028W MGE1P38523 228 aa7.34□□□□□ -1.23
MSP1YGR028W VPS53P47061 822 aa7.34□□□□□ -1.23
MSP1YGR028W FMS1P50264 508 aa7.34□□□□□ -1.23
MSP1YGR028W HAS1Q03532 505 aaKnown RBP7.34□□□□□ -1.23
MSP1YGR028W ESF1Q06344 628 aaKnown RBP7.34□□□□□ -1.23
MSP1YGR028W YDR215CQ12240 137 aa7.34□□□□□ -1.23
MSP1YGR028W YLL054CQ12244 843 aa7.34□□□□□ -1.23
MSP1YGR028W YOR111WQ99210 232 aa7.34□□□□□ -1.23
MSP1YGR028W AI3P03877 415 aa7.33□□□□□ -1.24
MSP1YGR028W POX1P13711 748 aa7.33□□□□□ -1.24
MSP1YGR028W TKL1P23254 680 aaKnown RBP7.33□□□□□ -1.24
MSP1YGR028W DUR3P33413 735 aa7.33□□□□□ -1.24
MSP1YGR028W SHU2P38957 223 aa7.33□□□□□ -1.24
MSP1YGR028W LSB1P53281 241 aa7.33□□□□□ -1.24
MSP1YGR028W HXT17P53631 564 aa7.33□□□□□ -1.24
MSP1YGR028W FAR11P53917 953 aa7.33□□□□□ -1.24
MSP1YGR028W DAK1P54838 584 aaKnown RBP7.33□□□□□ -1.24
MSP1YGR028W MDM1Q01846 1127 aa7.33□□□□□ -1.24
MSP1YGR028W TRM11Q12463 433 aa7.33□□□□□ -1.24
MSP1YGR028W PEP3P27801 918 aa7.32□□□□□ -1.24
MSP1YGR028W TFC4P33339 1025 aa7.32□□□□□ -1.24
MSP1YGR028W MAE1P36013 669 aaKnown RBP7.32□□□□□ -1.24
MSP1YGR028W TAT1P38085 619 aa7.32□□□□□ -1.24
MSP1YGR028W FLR1P38124 548 aa7.32□□□□□ -1.24
MSP1YGR028W HXT13P39924 564 aa7.32□□□□□ -1.24
MSP1YGR028W DAK2P43550 591 aa7.32□□□□□ -1.24
MSP1YGR028W YFL040WP43562 540 aa7.32□□□□□ -1.24
MSP1YGR028W VPS72Q03388 795 aa7.32□□□□□ -1.24
MSP1YGR028W EST2Q06163 884 aa7.32□□□□□ -1.24
MSP1YGR028W GUD1Q07729 489 aa7.32□□□□□ -1.24
MSP1YGR028W CLF1Q12309 687 aaPredicted RBP7.32□□□□□ -1.24
MSP1YGR028W AHC1Q12433 566 aa7.32□□□□□ -1.24
MSP1YGR028W YDR524C-BQ3E6R4 66 aa7.32□□□□□ -1.24
MSP1YGR028W YCK2P23292 546 aaKnown RBP7.31□□□□□ -1.24
MSP1YGR028W RSC6P25632 483 aa7.31□□□□□ -1.24
MSP1YGR028W LIF1P53150 421 aa7.31□□□□□ -1.24
MSP1YGR028W FMP30Q02883 468 aa7.31□□□□□ -1.24
MSP1YGR028W DSE3Q08729 430 aa7.31□□□□□ -1.24
MSP1YGR028W YIG1Q08956 461 aa7.31□□□□□ -1.24
MSP1YGR028W ELG1Q12050 791 aa7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 122.3 ms