RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C ECM1P39715 212 aa11.39□□□□□ -0.59
CCA1YER168C NCS2P53923 493 aaPredicted RBP11.39□□□□□ -0.59
CCA1YER168C YML082WQ04533 649 aaKnown RBP11.39□□□□□ -0.59
CCA1YER168C SPO21Q12411 609 aa11.39□□□□□ -0.59
CCA1YER168C ARG4P04076 463 aaPredicted RBP11.38□□□□□ -0.59
CCA1YER168C PRP9P19736 530 aaKnown RBP11.38□□□□□ -0.59
CCA1YER168C UBC6P33296 250 aaPredicted RBP11.38□□□□□ -0.59
CCA1YER168C TGL1P34163 548 aa11.38□□□□□ -0.59
CCA1YER168C TRZ1P36159 838 aaPredicted RBP11.38□□□□□ -0.59
CCA1YER168C YJR039WP47107 1121 aa11.38□□□□□ -0.59
CCA1YER168C CTR1P49573 406 aa11.38□□□□□ -0.59
CCA1YER168C YGL039WP53183 348 aaKnown RBP11.38□□□□□ -0.59
CCA1YER168C YGR117CP53270 476 aa11.38□□□□□ -0.59
CCA1YER168C EEB1Q02891 456 aa11.38□□□□□ -0.59
CCA1YER168C YSC83P32792 385 aa11.38□□□□□ -0.59
CCA1YER168C MED8P38304 223 aa11.38□□□□□ -0.59
CCA1YER168C PXA1P41909 870 aa11.38□□□□□ -0.59
CCA1YER168C RIM8P53179 542 aa11.38□□□□□ -0.59
CCA1YER168C AIM41Q12032 185 aa11.38□□□□□ -0.59
CCA1YER168C RKM4Q12504 494 aa11.38□□□□□ -0.59
CCA1YER168C SAM1P10659 382 aaKnown RBP11.37□□□□□ -0.59
CCA1YER168C PYC1P11154 1178 aaKnown RBP11.37□□□□□ -0.59
CCA1YER168C TCP1P12612 559 aaKnown RBP11.37□□□□□ -0.59
CCA1YER168C GLC3P32775 704 aa11.37□□□□□ -0.59
CCA1YER168C LCP5P40079 357 aaPredicted RBP11.37□□□□□ -0.59
CCA1YER168C TRS85P46944 698 aa11.37□□□□□ -0.59
CCA1YER168C BRO1P48582 844 aa11.37□□□□□ -0.59
CCA1YER168C JJJ1P53863 590 aa11.37□□□□□ -0.59
CCA1YER168C ERC1P38767 581 aa11.36□□□□□ -0.59
CCA1YER168C FET4P40988 552 aa11.36□□□□□ -0.59
CCA1YER168C ENV11P53246 860 aa11.36□□□□□ -0.59
CCA1YER168C TDA9Q04545 1251 aa11.36□□□□□ -0.59
CCA1YER168C YDR278CQ05612 105 aa11.36□□□□□ -0.59
CCA1YER168C GUD1Q07729 489 aa11.36□□□□□ -0.59
CCA1YER168C SDH5Q08230 162 aa11.36□□□□□ -0.59
CCA1YER168C YDL206WQ12424 762 aa11.36□□□□□ -0.59
CCA1YER168C YLR462WO13556 202 aa11.35□□□□□ -0.59
CCA1YER168C KIP1P28742 1111 aa11.35□□□□□ -0.59
CCA1YER168C EXO5P38289 585 aa11.35□□□□□ -0.59
CCA1YER168C HIS2P38635 335 aa11.35□□□□□ -0.59
CCA1YER168C YHL049CP38722 271 aa11.35□□□□□ -0.59
CCA1YER168C CCT2P39076 527 aaKnown RBP11.35□□□□□ -0.59
CCA1YER168C YEL075CP39972 122 aa11.35□□□□□ -0.59
CCA1YER168C YER189WP40104 122 aa11.35□□□□□ -0.59
CCA1YER168C YFL064CP43540 174 aa11.35□□□□□ -0.59
CCA1YER168C NMD5P46970 1048 aa11.35□□□□□ -0.59
CCA1YER168C PTA1Q01329 785 aaPredicted RBP11.35□□□□□ -0.59
CCA1YER168C YMR187CQ03236 431 aa11.35□□□□□ -0.59
CCA1YER168C DON1Q05610 365 aa11.35□□□□□ -0.59
CCA1YER168C SPH1Q06160 661 aa11.35□□□□□ -0.59
CCA1YER168C CRD1Q07560 283 aa11.35□□□□□ -0.59
CCA1YER168C YPL225WQ08971 146 aaKnown RBP11.35□□□□□ -0.59
CCA1YER168C YBL111CQ3E7Y5 667 aa11.35□□□□□ -0.59
CCA1YER168C SNF1P06782 633 aaKnown RBP11.35□□□□□ -0.59
CCA1YER168C SPT2P06843 333 aaPredicted RBP11.35□□□□□ -0.59
CCA1YER168C DBP5P20449 482 aaKnown RBP11.35□□□□□ -0.59
CCA1YER168C CDC11P32458 415 aa11.35□□□□□ -0.59
CCA1YER168C PSY2P40164 858 aa11.35□□□□□ -0.59
CCA1YER168C YMR1P47147 688 aaKnown RBP RIP-Chip data11.35□□□□□ -0.59not detected
CCA1YER168C SUB2Q07478 446 aaKnown RBP11.35□□□□□ -0.59
CCA1YER168C SLX4Q12098 748 aa11.35□□□□□ -0.59
CCA1YER168C SEC21P32074 935 aaKnown RBP11.34□□□□□ -0.59
CCA1YER168C RRT2P38332 387 aa11.34□□□□□ -0.59
CCA1YER168C KAP123P40069 1113 aaKnown RBP11.34□□□□□ -0.59
CCA1YER168C VPS70P47161 811 aa11.34□□□□□ -0.59
CCA1YER168C TAM41P53230 385 aa11.34□□□□□ -0.59
CCA1YER168C NCR1Q12200 1170 aa11.33□□□□□ -0.6
CCA1YER168C CSR2Q12734 1121 aa11.33□□□□□ -0.6
CCA1YER168C CDC33P07260 213 aaKnown RBP11.32□□□□□ -0.6
CCA1YER168C GCD6P32501 712 aaKnown RBP11.32□□□□□ -0.6
CCA1YER168C MUD1P32605 298 aaKnown RBP11.32□□□□□ -0.6
CCA1YER168C OAF3P36023 863 aa11.32□□□□□ -0.6
CCA1YER168C MMS21P38632 267 aa11.32□□□□□ -0.6
CCA1YER168C ZPR1P53303 486 aaKnown RBP11.32□□□□□ -0.6
CCA1YER168C USA1Q03714 838 aa11.32□□□□□ -0.6
CCA1YER168C DUS3Q06053 668 aaKnown RBP11.32□□□□□ -0.6
CCA1YER168C FBP1P09201 348 aa11.31□□□□□ -0.6
CCA1YER168C PRE10P21242 288 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
CCA1YER168C SHP1P34223 423 aa11.31□□□□□ -0.6
CCA1YER168C SAK1P38990 1142 aa11.31□□□□□ -0.6
CCA1YER168C SPC72P39723 622 aa11.31□□□□□ -0.6
CCA1YER168C SAP185P40856 1058 aa11.31□□□□□ -0.6
CCA1YER168C PNP1Q05788 311 aa11.31□□□□□ -0.6
CCA1YER168C UBX5Q06682 500 aa11.31□□□□□ -0.6
CCA1YER168C CDC53Q12018 815 aaKnown RBP11.31□□□□□ -0.6
CCA1YER168C CAP1P28495 268 aaKnown RBP11.31□□□□□ -0.6
CCA1YER168C NCL1P38205 684 aaKnown RBP11.31□□□□□ -0.6
CCA1YER168C ECM2P38241 364 aaKnown RBP11.31□□□□□ -0.6
CCA1YER168C SMX2P40204 77 aaKnown RBP11.31□□□□□ -0.6
CCA1YER168C ATG36P46983 293 aa11.31□□□□□ -0.6
CCA1YER168C CLA4P48562 842 aa11.31□□□□□ -0.6
CCA1YER168C UTP6Q02354 440 aaKnown RBP11.31□□□□□ -0.6
CCA1YER168C MTG1Q03151 367 aaPredicted RBP11.31□□□□□ -0.6
CCA1YER168C PIG1Q06216 648 aa11.31□□□□□ -0.6
CCA1YER168C GAL2P13181 574 aa11.3□□□□□ -0.6
CCA1YER168C PLC1P32383 869 aa11.3□□□□□ -0.6
CCA1YER168C MCR1P36060 302 aaKnown RBP11.3□□□□□ -0.6
CCA1YER168C YSW1P38280 609 aa11.3□□□□□ -0.6
CCA1YER168C TIF5P38431 405 aaKnown RBP11.3□□□□□ -0.6
CCA1YER168C AVT1P47082 602 aa11.3□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms