RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W MSH4P40965 878 aaPredicted RBP1.75□□□□□ -2.13
SXM1YDR395W SEC27P41811 889 aaKnown RBP1.75□□□□□ -2.13
SXM1YDR395W MTR4P47047 1073 aaKnown RBP1.75□□□□□ -2.13
SXM1YDR395W SRB7P47822 140 aa1.75□□□□□ -2.13
SXM1YDR395W SUR7P54003 302 aa1.75□□□□□ -2.13
SXM1YDR395W YPL191CQ08930 360 aa1.75□□□□□ -2.13
SXM1YDR395W SLX4Q12098 748 aa1.75□□□□□ -2.13
SXM1YDR395W DBP10Q12389 995 aaKnown RBP1.75□□□□□ -2.13
SXM1YDR395W PHO4P07270 312 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W SRS2P12954 1174 aa1.74□□□□□ -2.13
SXM1YDR395W SNA3P14359 133 aa1.74□□□□□ -2.13
SXM1YDR395W CDC48P25694 835 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W NOP4P37838 685 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W SEA4P38164 1038 aa1.74□□□□□ -2.13
SXM1YDR395W MGE1P38523 228 aa1.74□□□□□ -2.13
SXM1YDR395W APE4P38821 490 aa1.74□□□□□ -2.13
SXM1YDR395W DAK2P43550 591 aa1.74□□□□□ -2.13
SXM1YDR395W MTO1P53070 669 aa1.74□□□□□ -2.13
SXM1YDR395W TIM11P81449 96 aaPredicted RBP1.74□□□□□ -2.13
SXM1YDR395W YPQ2Q06328 317 aa1.74□□□□□ -2.13
SXM1YDR395W PSR1Q07800 427 aa1.74□□□□□ -2.13
SXM1YDR395W GPI13Q07830 1017 aa1.74□□□□□ -2.13
SXM1YDR395W CDC45Q08032 650 aa1.74□□□□□ -2.13
SXM1YDR395W MET6P05694 767 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W PFK1P16861 987 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W KRR1P25586 316 aaPredicted RBP1.74□□□□□ -2.13
SXM1YDR395W SWI3P32591 825 aa1.74□□□□□ -2.13
SXM1YDR395W MNR2P35724 969 aa1.74□□□□□ -2.13
SXM1YDR395W CEM1P39525 442 aa1.74□□□□□ -2.13
SXM1YDR395W SEC9P40357 651 aa1.74□□□□□ -2.13
SXM1YDR395W NUP82P40368 713 aa1.74□□□□□ -2.13
SXM1YDR395W OCA1P50946 238 aaPredicted RBP1.74□□□□□ -2.13
SXM1YDR395W HOL1P53389 586 aa1.74□□□□□ -2.13
SXM1YDR395W YNL165WP53891 406 aa1.74□□□□□ -2.13
SXM1YDR395W KRE33P53914 1056 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W ADE12P80210 433 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W VMS1Q04311 632 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W LCD1Q04377 747 aa1.74□□□□□ -2.13
SXM1YDR395W KAR5Q04746 504 aa1.74□□□□□ -2.13
SXM1YDR395W WTM2Q12206 467 aa1.74□□□□□ -2.13
SXM1YDR395W NOP58Q12499 511 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W NOP14Q99207 810 aaKnown RBP1.74□□□□□ -2.13
SXM1YDR395W CDC31P06704 161 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W RPS8AP0CX39 200 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W RPS8BP0CX40 200 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W HAP4P14064 554 aa1.73□□□□□ -2.13
SXM1YDR395W RED1P14291 827 aa1.73□□□□□ -2.13
SXM1YDR395W MSD1P15179 658 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W ISF1P32488 338 aa1.73□□□□□ -2.13
SXM1YDR395W SMY2P32909 740 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W MCD4P36051 919 aa1.73□□□□□ -2.13
SXM1YDR395W GPT2P36148 743 aa1.73□□□□□ -2.13
SXM1YDR395W TRZ1P36159 838 aaPredicted RBP1.73□□□□□ -2.13
SXM1YDR395W YHR218WP38899 603 aa1.73□□□□□ -2.13
SXM1YDR395W UTP7P40055 554 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W MEP1P40260 492 aa1.73□□□□□ -2.13
SXM1YDR395W JJJ2P46997 583 aa1.73□□□□□ -2.13
SXM1YDR395W GPI8P49018 411 aa1.73□□□□□ -2.13
SXM1YDR395W NAF1P53919 492 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W UBX4P54730 416 aa1.73□□□□□ -2.13
SXM1YDR395W RCF1Q03713 159 aa1.73□□□□□ -2.13
SXM1YDR395W SXM1Q04175 944 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W VIP1Q06685 1146 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W CDC53Q12018 815 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W FLO11P08640 1367 aa1.73□□□□□ -2.13
SXM1YDR395W CIT1P00890 479 aa1.73□□□□□ -2.13
SXM1YDR395W RPL8AP17076 256 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W CLN2P20438 545 aa1.73□□□□□ -2.13
SXM1YDR395W URA1P28272 314 aaPredicted RBP1.73□□□□□ -2.13
SXM1YDR395W BRF1P29056 596 aa1.73□□□□□ -2.13
SXM1YDR395W SEC21P32074 935 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W MTC2P34246 357 aa1.73□□□□□ -2.13
SXM1YDR395W RRF1P38771 230 aa1.73□□□□□ -2.13
SXM1YDR395W CRP1P38845 465 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W VPS4P52917 437 aa1.73□□□□□ -2.13
SXM1YDR395W HUL5P53119 910 aa1.73□□□□□ -2.13
SXM1YDR395W YGR016WP53209 190 aa1.73□□□□□ -2.13
SXM1YDR395W YGR053CP53234 283 aa1.73□□□□□ -2.13
SXM1YDR395W ECM23Q02710 187 aa1.73□□□□□ -2.13
SXM1YDR395W YMR187CQ03236 431 aa1.73□□□□□ -2.13
SXM1YDR395W SPR28Q04921 423 aa1.73□□□□□ -2.13
SXM1YDR395W YDR341CQ05506 607 aaKnown RBP1.73□□□□□ -2.13
SXM1YDR395W HIS5P07172 385 aa1.72□□□□□ -2.13
SXM1YDR395W POT1P27796 417 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SXM1YDR395W FMP10P40098 244 aa1.72□□□□□ -2.13
SXM1YDR395W ESL1P40456 1118 aa1.72□□□□□ -2.13
SXM1YDR395W GPP1P41277 250 aaKnown RBP1.72□□□□□ -2.13
SXM1YDR395W IML2P47031 731 aa1.72□□□□□ -2.13
SXM1YDR395W GPG1P53130 126 aa1.72□□□□□ -2.13
SXM1YDR395W GRC3Q07845 632 aa1.72□□□□□ -2.13
SXM1YDR395W SDH5Q08230 162 aa1.72□□□□□ -2.13
SXM1YDR395W YLR125WQ12138 136 aa1.72□□□□□ -2.13
SXM1YDR395W HSP42Q12329 375 aa1.72□□□□□ -2.13
SXM1YDR395W YOL087CQ99247 1116 aa1.72□□□□□ -2.13
SXM1YDR395W PHO8P11491 566 aa1.72□□□□□ -2.13
SXM1YDR395W PGI1P12709 554 aaKnown RBP1.72□□□□□ -2.13
SXM1YDR395W FUB1P25659 250 aa1.72□□□□□ -2.13
SXM1YDR395W ECM32P32644 1121 aaKnown RBP1.72□□□□□ -2.13
SXM1YDR395W BCS1P32839 456 aa1.72□□□□□ -2.13
SXM1YDR395W GPB2P39717 880 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms