RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDS1	YDR113C	CCM1	P48237	864 aa	Predicted RBP	5.09	□□□□□ -1.59
PDS1	YDR113C	RAI1	P53063	387 aa	Known RBP	5.09	□□□□□ -1.59
PDS1	YDR113C	YGR125W	P53273	1036 aa		5.09	□□□□□ -1.59
PDS1	YDR113C	REC104	P33323	182 aa		5.08	□□□□□ -1.6
PDS1	YDR113C	OCA5	P38738	679 aa		5.08	□□□□□ -1.6
PDS1	YDR113C	RSP5	P39940	809 aa	Known RBP	5.08	□□□□□ -1.6
PDS1	YDR113C	PSP2	P50109	593 aa	Known RBP	5.08	□□□□□ -1.6
PDS1	YDR113C	NCS6	P53088	359 aa		5.08	□□□□□ -1.6
PDS1	YDR113C	NSE3	Q05541	303 aa		5.08	□□□□□ -1.6
PDS1	YDR113C	KCS1	Q12494	1050 aa		5.08	□□□□□ -1.6
PDS1	YDR113C	FBP1	P09201	348 aa		5.07	□□□□□ -1.6
PDS1	YDR113C	PFK1	P16861	987 aa	Known RBP	5.07	□□□□□ -1.6
PDS1	YDR113C	STE14	P32584	239 aa		5.07	□□□□□ -1.6
PDS1	YDR113C	STE13	P33894	931 aa		5.07	□□□□□ -1.6
PDS1	YDR113C	ATG19	P35193	415 aa		5.07	□□□□□ -1.6
PDS1	YDR113C	BET3	P36149	193 aa		5.07	□□□□□ -1.6
PDS1	YDR113C	SSL1	Q04673	461 aa	Predicted RBP	5.07	□□□□□ -1.6
PDS1	YDR113C	AIM39	Q08223	395 aa		5.07	□□□□□ -1.6
PDS1	YDR113C	UPC2	Q12151	913 aa		5.07	□□□□□ -1.6
PDS1	YDR113C	HRR25	P29295	494 aa	Known RBP	5.06	□□□□□ -1.6
PDS1	YDR113C	OAR1	P35731	278 aa		5.06	□□□□□ -1.6
PDS1	YDR113C	RTA1	P53047	317 aa		5.06	□□□□□ -1.6
PDS1	YDR113C	HDA1	P53973	706 aa		5.06	□□□□□ -1.6
PDS1	YDR113C	PPM2	Q08282	695 aa		5.06	□□□□□ -1.6
PDS1	YDR113C	YOL098C	Q12496	1037 aa		5.06	□□□□□ -1.6
PDS1	YDR113C	CAN1	P04817	590 aa		5.05	□□□□□ -1.6
PDS1	YDR113C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
PDS1	YDR113C	RPD3	P32561	433 aa		5.05	□□□□□ -1.6
PDS1	YDR113C	UBP6	P43593	499 aa	Known RBP	5.05	□□□□□ -1.6
PDS1	YDR113C	YML122C	Q03207	126 aa		5.05	□□□□□ -1.6
PDS1	YDR113C	ENV7	Q12003	364 aa		5.05	□□□□□ -1.6
PDS1	YDR113C	NPC2	Q12408	173 aa		5.05	□□□□□ -1.6
PDS1	YDR113C	LAS17	Q12446	633 aa		5.05	□□□□□ -1.6
PDS1	YDR113C	MOH1	P38191	138 aa		5.04	□□□□□ -1.6
PDS1	YDR113C	ENB1	Q08299	606 aa		5.04	□□□□□ -1.6
PDS1	YDR113C	CDC53	Q12018	815 aa	Known RBP	5.04	□□□□□ -1.6
PDS1	YDR113C	HUL4	P40985	892 aa		5.03	□□□□□ -1.6
PDS1	YDR113C	YDL124W	Q07551	312 aa	Known RBP	5.03	□□□□□ -1.6
PDS1	YDR113C	YTA7	P40340	1379 aa		5.03	□□□□□ -1.6
PDS1	YDR113C	URA1	P28272	314 aa	Predicted RBP	5.02	□□□□□ -1.61
PDS1	YDR113C	SCT1	P32784	759 aa		5.02	□□□□□ -1.61
PDS1	YDR113C	GGA2	P38817	585 aa	Known RBP	5.02	□□□□□ -1.61
PDS1	YDR113C	YKR011C	Q02209	353 aa		5.02	□□□□□ -1.61
PDS1	YDR113C	SLU7	Q02775	382 aa	Known RBP	5.02	□□□□□ -1.61
PDS1	YDR113C	MPH2	P0CD99	609 aa		5.01	□□□□□ -1.61
PDS1	YDR113C	RFA1	P22336	621 aa	Known RBP	5.01	□□□□□ -1.61
PDS1	YDR113C	KAR4	P25583	335 aa		5.01	□□□□□ -1.61
PDS1	YDR113C	YIL108W	P40483	696 aa	Known RBP	5.01	□□□□□ -1.61
PDS1	YDR113C	GYP8	P43570	497 aa		5.01	□□□□□ -1.61
PDS1	YDR113C	YGR283C	P53336	341 aa	Predicted RBP	5.01	□□□□□ -1.61
PDS1	YDR113C	GUP2	Q08929	609 aa		5.01	□□□□□ -1.61
PDS1	YDR113C	TOM70	P07213	617 aa	Known RBP	5	□□□□□ -1.61
PDS1	YDR113C	SED4	P25365	1065 aa		5	□□□□□ -1.61
PDS1	YDR113C	TYE7	P33122	291 aa	Predicted RBP	5	□□□□□ -1.61
PDS1	YDR113C	EMC3	P36039	253 aa		5	□□□□□ -1.61
PDS1	YDR113C	CTF8	P38877	133 aa		5	□□□□□ -1.61
PDS1	YDR113C	SDP1	P40479	209 aa		5	□□□□□ -1.61
PDS1	YDR113C	CEP3	P40969	608 aa		5	□□□□□ -1.61
PDS1	YDR113C	BUD6	P41697	788 aa		5	□□□□□ -1.61
PDS1	YDR113C	RPN4	Q03465	531 aa		5	□□□□□ -1.61
PDS1	YDR113C	GAL11	P19659	1081 aa		4.99	□□□□□ -1.61
PDS1	YDR113C	SRP40	P32583	406 aa	Predicted RBP	4.99	□□□□□ -1.61
PDS1	YDR113C	TY4A-J	P47023	414 aa		4.99	□□□□□ -1.61
PDS1	YDR113C	BUL1	P48524	976 aa		4.99	□□□□□ -1.61
PDS1	YDR113C	UBA2	P52488	636 aa		4.99	□□□□□ -1.61
PDS1	YDR113C	VPS30	Q02948	557 aa		4.99	□□□□□ -1.61
PDS1	YDR113C	ERR1	P0CX10	437 aa		4.98	□□□□□ -1.61
PDS1	YDR113C	ERR2	P0CX11	437 aa		4.98	□□□□□ -1.61
PDS1	YDR113C	ALG2	P43636	503 aa		4.98	□□□□□ -1.61
PDS1	YDR113C	SEC21	P32074	935 aa	Known RBP	4.97	□□□□□ -1.61
PDS1	YDR113C	EFT1	P32324	842 aa	Known RBP	4.97	□□□□□ -1.61
PDS1	YDR113C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PDS1	YDR113C	CHZ1	P40019	153 aa	Predicted RBP	4.97	□□□□□ -1.61
PDS1	YDR113C	MAL11	P53048	616 aa		4.97	□□□□□ -1.61
PDS1	YDR113C	NOG2	P53742	486 aa	Known RBP	4.97	□□□□□ -1.61
PDS1	YDR113C	ERG5	P54781	538 aa		4.97	□□□□□ -1.61
PDS1	YDR113C	TUB3	P09734	445 aa	Known RBP	4.96	□□□□□ -1.62
PDS1	YDR113C	DAL7	P21826	554 aa		4.96	□□□□□ -1.62
PDS1	YDR113C	YCL002C	P25565	263 aa		4.96	□□□□□ -1.62
PDS1	YDR113C	CYS3	P31373	394 aa	Known RBP	4.96	□□□□□ -1.62
PDS1	YDR113C	YKL091C	P33324	310 aa	Known RBP	4.96	□□□□□ -1.62
PDS1	YDR113C	BRN1	P38170	754 aa		4.96	□□□□□ -1.62
PDS1	YDR113C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
PDS1	YDR113C	NIT3	P49954	291 aa		4.96	□□□□□ -1.62
PDS1	YDR113C	TAD1	P53065	400 aa		4.96	□□□□□ -1.62
PDS1	YDR113C	ATP25	Q03153	612 aa		4.96	□□□□□ -1.62
PDS1	YDR113C	LRS4	Q04087	347 aa	Known RBP	4.96	□□□□□ -1.62
PDS1	YDR113C	YOR131C	Q12486	218 aa		4.96	□□□□□ -1.62
PDS1	YDR113C	TIM23	P32897	222 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	SPC29	P33419	253 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	KTR4	P38131	464 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	GDH3	P39708	457 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	DAM1	P53267	343 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	YLR040C	Q07988	224 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	YOL073C	Q08232	322 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	HAL9	Q12180	1030 aa		4.95	□□□□□ -1.62
PDS1	YDR113C	RPS9A	O13516	197 aa	Known RBP	4.94	□□□□□ -1.62
PDS1	YDR113C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
PDS1	YDR113C	PRP4	P20053	465 aa	Known RBP	4.94	□□□□□ -1.62
PDS1	YDR113C	YHR078W	P38799	552 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms