RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Tceanc2Q8R2M0 207 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Srgap1Q91Z69 1062 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Lnx1O70263 728 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Frat1P70339 274 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Afap1Q80YS6 731 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 CemipQ8BI06 1361 aa17.46■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Zap70P43404 618 aa17.46■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Psme1P97371 249 aa17.46■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Ift57Q8BXG3 429 aa17.46■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Polr3dQ91WD1 398 aa17.46■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Tpm1P58771 284 aa17.46■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Dnaaf4Q8R368 420 aa17.46■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 CoilQ5SU73 570 aa17.45■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Ubxn10Q8BG34 277 aa17.45■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Sp8Q8BMJ8 486 aa17.45■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Atg3Q9CPX6 314 aa17.45■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Ubash3aQ3V3E1 624 aa17.45■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Atf7Q8R0S1 413 aa17.45■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 ZwintQ9CQU5 252 aa17.45■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Gtpbp6Q3U6U5 514 aa17.44■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 R3hcc1Q8BSI6 488 aa17.44■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Parp14Q2EMV9 1817 aa17.44■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Cnksr1A2A9K7 700 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Cfdp1O88271 295 aaKnown RBP17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Irx2P81066 474 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Bend3Q6PAL0 825 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Rsph4aQ8BYM7 716 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Irx6Q9ER75 438 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Exoc6bA6H5Z3 810 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Ugt1a5B2RT14 529 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Samd1D3YXK1 519 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Kif2aP28740 705 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Csrnp1P59054 583 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Zbtb45Q52KG4 520 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Ano10Q8BH79 659 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Slu7Q8BHJ9 585 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Rps6kb1Q8BSK8 525 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Ubxn4Q8VCH8 506 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Pik3c2bE9QAN8 1632 aa17.43■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Znf335A2A5K6 1337 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Rnf20Q5DTM8 973 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Cnpy2Q9QXT0 182 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Trpm3Q5F4S9 1721 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Surf1P09925 306 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 MecomP14404 1042 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Zkscan4Q5SZT6 480 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Ano1Q8BHY3 960 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Odf2lQ9D478 642 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Arfgef2A2A5R2 1792 aa17.42■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Zc3h13E9Q784 1729 aaKnown RBP17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Clec11aO88200 328 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Map3k13Q1HKZ5 959 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Tgfb1i1Q62219 461 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Kcnk13Q8R1P5 405 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Cps1Q8C196 1500 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Zfp597E9Q6S0 419 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Paxbp1P58501 919 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Tshz1Q5DTH5 1084 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Hook1Q8BIL5 728 aa17.41■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Abcc4E9Q236 1325 aa17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Pa2g4P50580 394 aaKnown RBP17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Txndc2Q6P902 515 aa17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Stx1aO35526 288 aa17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Ctdnep1Q3TP92 244 aa17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 RbsnQ80Y56 783 aa17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Mphosph10Q810V0 681 aaKnown RBP17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Cabp4Q8VHC5 271 aa17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Tnrc6bQ8BKI2 1810 aaKnown RBP17.4■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 NalcnQ8BXR5 1738 aa17.39■□□□□ 0.38
Ushbp1-201ENSMUST00000049184 Map7d2A2AG50 781 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Serpinb6bO08804 377 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Zfp317Q8C0Q5 607 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Sirt1Q923E4 737 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Tomm22Q9CPQ3 142 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Echdc1Q9D9V3 322 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Il1rapl2Q9ERS6 686 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 AatfQ9JKX4 526 aaKnown RBP17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Tbc1d4Q8BYJ6 1307 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Usp28Q5I043 1051 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Ints4Q8CIM8 964 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Iffo2Q8R2V2 512 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Pcdhb15Q91Y04 786 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Tubb6Q922F4 447 aa17.39■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Anks1aP59672 1150 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Dennd6aQ8BH65 605 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Zbtb3Q91X45 518 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 HnrnpmQ9D0E1 729 aaKnown RBP17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Stat1P42225 749 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Tmem109Q3UBX0 243 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Fam53cQ8BXQ8 393 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Spata32Q8C5V0 334 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Elf2Q9JHC9 593 aa17.38■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Adcy9P51830 1353 aa17.37■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Mdm2P23804 489 aa17.37■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Dhx40Q6PE54 779 aaKnown RBP17.37■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Mtmr3Q8K296 1196 aa17.37■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Ptpn23Q6PB44 1692 aa17.37■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Chd2E9PZM4 1827 aaKnown RBP17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Phf20l1Q8CCJ9 1013 aa17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 CrebrfQ8CDG5 640 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 65 ms