Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Gm25239-201ENSMUST00000174915 86 ntBASIC39.83■■■■□ 3.97
Pcdhb15Q91Y04 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Pcdhb15Q91Y04 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Pcdhb15Q91Y04 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.84■■■■□ 3.65
Pcdhb15Q91Y04 Psd-208ENSMUST00000224556 2034 ntBASIC36.72■■■■□ 3.47
Pcdhb15Q91Y04 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
Pcdhb15Q91Y04 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Pcdhb15Q91Y04 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Pcdhb15Q91Y04 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Pcdhb15Q91Y04 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
Pcdhb15Q91Y04 Gm15042-201ENSMUST00000120212 883 ntBASIC35.63■■■■□ 3.29
Pcdhb15Q91Y04 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
Pcdhb15Q91Y04 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Pcdhb15Q91Y04 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.14■■■■□ 3.22
Pcdhb15Q91Y04 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Pcdhb15Q91Y04 Gm15045-201ENSMUST00000117359 883 ntBASIC35.09■■■■□ 3.21
Pcdhb15Q91Y04 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Pcdhb15Q91Y04 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Pcdhb15Q91Y04 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
Pcdhb15Q91Y04 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Pcdhb15Q91Y04 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Pcdhb15Q91Y04 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Pcdhb15Q91Y04 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
Pcdhb15Q91Y04 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Pcdhb15Q91Y04 Gm24109-201ENSMUST00000175489 103 ntBASIC34.19■■■■□ 3.06
Pcdhb15Q91Y04 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Pcdhb15Q91Y04 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.13■■■■□ 3.05
Pcdhb15Q91Y04 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.12■■■■□ 3.05
Pcdhb15Q91Y04 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.09■■■■□ 3.05
Pcdhb15Q91Y04 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Pcdhb15Q91Y04 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Pcdhb15Q91Y04 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Pcdhb15Q91Y04 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.87■■■■□ 3.01
Pcdhb15Q91Y04 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.83■■■■□ 3.01
Pcdhb15Q91Y04 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Pcdhb15Q91Y04 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Pcdhb15Q91Y04 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.56■■■□□ 2.96
Pcdhb15Q91Y04 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Pcdhb15Q91Y04 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
Pcdhb15Q91Y04 Gm23366-201ENSMUST00000175022 89 ntBASIC33.3■■■□□ 2.92
Pcdhb15Q91Y04 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.22■■■□□ 2.91
Pcdhb15Q91Y04 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Pcdhb15Q91Y04 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Pcdhb15Q91Y04 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Pcdhb15Q91Y04 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.16■■■□□ 2.9
Pcdhb15Q91Y04 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pcdhb15Q91Y04 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Pcdhb15Q91Y04 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
Pcdhb15Q91Y04 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33■■■□□ 2.87
Pcdhb15Q91Y04 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Pcdhb15Q91Y04 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Pcdhb15Q91Y04 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.77■■■□□ 2.84
Pcdhb15Q91Y04 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pcdhb15Q91Y04 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.7■■■□□ 2.82
Pcdhb15Q91Y04 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pcdhb15Q91Y04 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.54■■■□□ 2.8
Pcdhb15Q91Y04 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pcdhb15Q91Y04 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pcdhb15Q91Y04 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Pcdhb15Q91Y04 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Pcdhb15Q91Y04 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pcdhb15Q91Y04 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.39■■■□□ 2.78
Pcdhb15Q91Y04 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pcdhb15Q91Y04 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Pcdhb15Q91Y04 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
Pcdhb15Q91Y04 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
Pcdhb15Q91Y04 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Pcdhb15Q91Y04 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pcdhb15Q91Y04 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Pcdhb15Q91Y04 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Pcdhb15Q91Y04 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcdhb15Q91Y04 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcdhb15Q91Y04 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Pcdhb15Q91Y04 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.95■■■□□ 2.71
Pcdhb15Q91Y04 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pcdhb15Q91Y04 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pcdhb15Q91Y04 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pcdhb15Q91Y04 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Pcdhb15Q91Y04 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.66■■■□□ 2.66
Pcdhb15Q91Y04 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.6■■■□□ 2.65
Pcdhb15Q91Y04 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pcdhb15Q91Y04 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pcdhb15Q91Y04 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.54■■■□□ 2.64
Pcdhb15Q91Y04 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pcdhb15Q91Y04 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pcdhb15Q91Y04 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pcdhb15Q91Y04 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pcdhb15Q91Y04 Gm27325-201ENSMUST00000175467 74 ntBASIC31.43■■■□□ 2.62
Pcdhb15Q91Y04 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcdhb15Q91Y04 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Pcdhb15Q91Y04 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pcdhb15Q91Y04 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pcdhb15Q91Y04 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pcdhb15Q91Y04 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pcdhb15Q91Y04 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pcdhb15Q91Y04 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pcdhb15Q91Y04 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcdhb15Q91Y04 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcdhb15Q91Y04 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Pcdhb15Q91Y04 Gm25238-201ENSMUST00000174914 89 ntBASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms