Protein–RNA interactions for Protein: Q62219

Tgfb1i1, Transforming growth factor beta-1-induced transcript 1 protein, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1i1Q62219 Gm25239-201ENSMUST00000174915 86 ntBASIC47,04■■■■■ 5,12
Tgfb1i1Q62219 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43,39■■■■■ 4,54
Tgfb1i1Q62219 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42,73■■■■■ 4,43
Tgfb1i1Q62219 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41,91■■■■■ 4,3
Tgfb1i1Q62219 Gm15042-201ENSMUST00000120212 883 ntBASIC41,3■■■■■ 4,2
Tgfb1i1Q62219 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40,96■■■■■ 4,15
Tgfb1i1Q62219 Gm24109-201ENSMUST00000175489 103 ntBASIC40,72■■■■■ 4,11
Tgfb1i1Q62219 Gm15045-201ENSMUST00000117359 883 ntBASIC40,52■■■■■ 4,08
Tgfb1i1Q62219 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40,49■■■■■ 4,07
Tgfb1i1Q62219 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39,91■■■■□ 3,98
Tgfb1i1Q62219 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39,68■■■■□ 3,94
Tgfb1i1Q62219 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39,33■■■■□ 3,89
Tgfb1i1Q62219 Gm23366-201ENSMUST00000175022 89 ntBASIC39,24■■■■□ 3,87
Tgfb1i1Q62219 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39,18■■■■□ 3,86
Tgfb1i1Q62219 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39,06■■■■□ 3,84
Tgfb1i1Q62219 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38,9■■■■□ 3,82
Tgfb1i1Q62219 Psd-208ENSMUST00000224556 2034 ntBASIC38,75■■■■□ 3,79
Tgfb1i1Q62219 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38,55■■■■□ 3,76
Tgfb1i1Q62219 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38,52■■■■□ 3,76
Tgfb1i1Q62219 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38,45■■■■□ 3,75
Tgfb1i1Q62219 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38,45■■■■□ 3,75
Tgfb1i1Q62219 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38,42■■■■□ 3,74
Tgfb1i1Q62219 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38,29■■■■□ 3,72
Tgfb1i1Q62219 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38,17■■■■□ 3,7
Tgfb1i1Q62219 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38,07■■■■□ 3,69
Tgfb1i1Q62219 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38,04■■■■□ 3,68
Tgfb1i1Q62219 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,99■■■■□ 3,67
Tgfb1i1Q62219 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,94■■■■□ 3,66
Tgfb1i1Q62219 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,91■■■■□ 3,66
Tgfb1i1Q62219 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37,69■■■■□ 3,62
Tgfb1i1Q62219 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37,44■■■■□ 3,58
Tgfb1i1Q62219 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37,44■■■■□ 3,58
Tgfb1i1Q62219 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37,36■■■■□ 3,57
Tgfb1i1Q62219 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37,3■■■■□ 3,56
Tgfb1i1Q62219 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37,25■■■■□ 3,55
Tgfb1i1Q62219 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37,22■■■■□ 3,55
Tgfb1i1Q62219 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37,22■■■■□ 3,55
Tgfb1i1Q62219 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37,18■■■■□ 3,54
Tgfb1i1Q62219 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37,14■■■■□ 3,54
Tgfb1i1Q62219 Gm25238-201ENSMUST00000174914 89 ntBASIC37,11■■■■□ 3,53
Tgfb1i1Q62219 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,88■■■■□ 3,49
Tgfb1i1Q62219 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,77■■■■□ 3,48
Tgfb1i1Q62219 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36,62■■■■□ 3,45
Tgfb1i1Q62219 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,61■■■■□ 3,45
Tgfb1i1Q62219 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36,58■■■■□ 3,45
Tgfb1i1Q62219 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36,56■■■■□ 3,44
Tgfb1i1Q62219 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36,5■■■■□ 3,43
Tgfb1i1Q62219 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36,49■■■■□ 3,43
Tgfb1i1Q62219 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36,48■■■■□ 3,43
Tgfb1i1Q62219 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36,43■■■■□ 3,42
Tgfb1i1Q62219 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36,36■■■■□ 3,41
Tgfb1i1Q62219 Gm27325-201ENSMUST00000175467 74 ntBASIC36,28■■■■□ 3,4
Tgfb1i1Q62219 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36,27■■■■□ 3,4
Tgfb1i1Q62219 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36,25■■■■□ 3,39
Tgfb1i1Q62219 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36,25■■■■□ 3,39
Tgfb1i1Q62219 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36,19■■■■□ 3,38
Tgfb1i1Q62219 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36,06■■■■□ 3,36
Tgfb1i1Q62219 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35,97■■■■□ 3,35
Tgfb1i1Q62219 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35,93■■■■□ 3,34
Tgfb1i1Q62219 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,92■■■■□ 3,34
Tgfb1i1Q62219 Gm10524-201ENSMUST00000181931 1893 ntBASIC35,88■■■■□ 3,33
Tgfb1i1Q62219 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35,87■■■■□ 3,33
Tgfb1i1Q62219 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35,83■■■■□ 3,33
Tgfb1i1Q62219 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,81■■■■□ 3,32
Tgfb1i1Q62219 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,79■■■■□ 3,32
Tgfb1i1Q62219 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35,77■■■■□ 3,32
Tgfb1i1Q62219 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,71■■■■□ 3,31
Tgfb1i1Q62219 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35,71■■■■□ 3,31
Tgfb1i1Q62219 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35,71■■■■□ 3,31
Tgfb1i1Q62219 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,7■■■■□ 3,31
Tgfb1i1Q62219 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35,61■■■■□ 3,29
Tgfb1i1Q62219 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35,61■■■■□ 3,29
Tgfb1i1Q62219 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,52■■■■□ 3,28
Tgfb1i1Q62219 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,44■■■■□ 3,26
Tgfb1i1Q62219 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35,44■■■■□ 3,26
Tgfb1i1Q62219 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35,42■■■■□ 3,26
Tgfb1i1Q62219 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35,41■■■■□ 3,26
Tgfb1i1Q62219 Rab21-202ENSMUST00000218831 843 ntBASIC35,4■■■■□ 3,26
Tgfb1i1Q62219 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35,35■■■■□ 3,25
Tgfb1i1Q62219 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,24
Tgfb1i1Q62219 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35,29■■■■□ 3,24
Tgfb1i1Q62219 Gm25262-201ENSMUST00000174934 133 ntBASIC35,28■■■■□ 3,24
Tgfb1i1Q62219 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35,28■■■■□ 3,24
Tgfb1i1Q62219 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35,25■■■■□ 3,23
Tgfb1i1Q62219 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35,16■■■■□ 3,22
Tgfb1i1Q62219 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35,08■■■■□ 3,21
Tgfb1i1Q62219 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35,06■■■■□ 3,2
Tgfb1i1Q62219 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35,03■■■■□ 3,2
Tgfb1i1Q62219 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC35,03■■■■□ 3,2
Tgfb1i1Q62219 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34,97■■■■□ 3,19
Tgfb1i1Q62219 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Tgfb1i1Q62219 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,95■■■■□ 3,19
Tgfb1i1Q62219 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34,92■■■■□ 3,18
Tgfb1i1Q62219 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34,92■■■■□ 3,18
Tgfb1i1Q62219 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34,8■■■■□ 3,16
Tgfb1i1Q62219 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34,8■■■■□ 3,16
Tgfb1i1Q62219 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,75■■■■□ 3,15
Tgfb1i1Q62219 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,7■■■■□ 3,14
Tgfb1i1Q62219 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34,67■■■■□ 3,14
Tgfb1i1Q62219 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,65■■■■□ 3,14
Retrieved 100 of 76,532 protein–RNA pairs in 29,8 ms