RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C ENV7Q12003 364 aa8.55□□□□□ -1.04
YTH1YPR107C RPC82P32349 654 aa8.54□□□□□ -1.04
YTH1YPR107C YBR238CP38330 731 aaKnown RBP8.54□□□□□ -1.04
YTH1YPR107C CAF16P43569 289 aa8.54□□□□□ -1.04
YTH1YPR107C ARI1P53111 347 aaKnown RBP8.54□□□□□ -1.04
YTH1YPR107C EAR1Q03212 550 aa8.54□□□□□ -1.04
YTH1YPR107C HFD1Q04458 532 aa8.54□□□□□ -1.04
YTH1YPR107C REH1Q06709 432 aa8.54□□□□□ -1.04
YTH1YPR107C MCX1P38323 520 aaPredicted RBP8.53□□□□□ -1.04
YTH1YPR107C NUG1P40010 520 aaKnown RBP8.53□□□□□ -1.04
YTH1YPR107C CIT3P43635 486 aa8.53□□□□□ -1.04
YTH1YPR107C SRT1Q03175 343 aa8.53□□□□□ -1.04
YTH1YPR107C MET7Q08645 548 aa8.53□□□□□ -1.04
YTH1YPR107C YVC1Q12324 675 aa8.53□□□□□ -1.04
YTH1YPR107C TMA17Q12513 150 aa8.53□□□□□ -1.04
YTH1YPR107C MPH2P0CD99 609 aa8.52□□□□□ -1.05
YTH1YPR107C RAD18P10862 487 aa8.52□□□□□ -1.05
YTH1YPR107C MDJ1P35191 511 aa8.52□□□□□ -1.05
YTH1YPR107C TYS1P36421 394 aaKnown RBP8.52□□□□□ -1.05
YTH1YPR107C GIC1P38785 314 aa8.52□□□□□ -1.05
YTH1YPR107C RSC3Q06639 885 aa8.52□□□□□ -1.05
YTH1YPR107C YOL057WQ08225 711 aa8.52□□□□□ -1.05
YTH1YPR107C SAM35P14693 329 aa8.51□□□□□ -1.05
YTH1YPR107C SSD1P24276 1250 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
YTH1YPR107C PCL2P25693 308 aa8.51□□□□□ -1.05
YTH1YPR107C TPM2P40414 161 aa8.51□□□□□ -1.05
YTH1YPR107C YKE2P52553 114 aa8.51□□□□□ -1.05
YTH1YPR107C MTC3P53077 123 aa8.51□□□□□ -1.05
YTH1YPR107C RCL1Q08096 367 aaPredicted RBP8.51□□□□□ -1.05
YTH1YPR107C SFL1P20134 766 aa8.5□□□□□ -1.05
YTH1YPR107C ACE2P21192 770 aa8.5□□□□□ -1.05
YTH1YPR107C GPG1P53130 126 aa8.5□□□□□ -1.05
YTH1YPR107C YPR196WQ06595 470 aa8.5□□□□□ -1.05
YTH1YPR107C RSC58Q07979 502 aa8.5□□□□□ -1.05
YTH1YPR107C OSW2Q12202 724 aa8.5□□□□□ -1.05
YTH1YPR107C ENP1P38333 483 aaKnown RBP8.49□□□□□ -1.05
YTH1YPR107C MET13P53128 600 aa8.49□□□□□ -1.05
YTH1YPR107C SNP1Q00916 300 aaPredicted RBP8.49□□□□□ -1.05
YTH1YPR107C WHI3P34761 661 aaKnown RBP8.48□□□□□ -1.05
YTH1YPR107C TDA6Q06466 467 aa8.48□□□□□ -1.05
YTH1YPR107C THI72Q08579 599 aa8.48□□□□□ -1.05
YTH1YPR107C SVS1Q12254 260 aa8.48□□□□□ -1.05
YTH1YPR107C RFA1P22336 621 aaKnown RBP8.47□□□□□ -1.05
YTH1YPR107C TRK2P28584 889 aa8.47□□□□□ -1.05
YTH1YPR107C HOG1P32485 435 aa8.47□□□□□ -1.05
YTH1YPR107C AKR1P39010 764 aa8.47□□□□□ -1.05
YTH1YPR107C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
YTH1YPR107C NOG2P53742 486 aaKnown RBP8.47□□□□□ -1.05
YTH1YPR107C RCM1P53972 490 aa8.47□□□□□ -1.05
YTH1YPR107C MTQ2Q03920 221 aaPredicted RBP8.47□□□□□ -1.05
YTH1YPR107C GUD1Q07729 489 aa8.47□□□□□ -1.05
YTH1YPR107C NSI1Q12457 570 aa8.47□□□□□ -1.05
YTH1YPR107C MCD4P36051 919 aa8.46□□□□□ -1.06
YTH1YPR107C RPN10P38886 268 aaKnown RBP8.46□□□□□ -1.06
YTH1YPR107C TY4A-JP47023 414 aa8.46□□□□□ -1.06
YTH1YPR107C TRE2Q08693 809 aa8.46□□□□□ -1.06
YTH1YPR107C NPP2P39997 493 aa8.45□□□□□ -1.06
YTH1YPR107C GPP1P41277 250 aaKnown RBP8.45□□□□□ -1.06
YTH1YPR107C PRY1P47032 299 aa8.45□□□□□ -1.06
YTH1YPR107C TMA7Q3E764 64 aaKnown RBP8.45□□□□□ -1.06
YTH1YPR107C PRP19P32523 503 aaKnown RBP8.44□□□□□ -1.06
YTH1YPR107C PCM1P38628 557 aaKnown RBP8.44□□□□□ -1.06
YTH1YPR107C CKB2P38930 258 aa8.44□□□□□ -1.06
YTH1YPR107C NIT1P40447 199 aa8.44□□□□□ -1.06
YTH1YPR107C PEX8P53248 589 aa8.44□□□□□ -1.06
YTH1YPR107C SFB2P53953 876 aa8.44□□□□□ -1.06
YTH1YPR107C SDH1Q00711 640 aa8.44□□□□□ -1.06
YTH1YPR107C VPS30Q02948 557 aa8.44□□□□□ -1.06
YTH1YPR107C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
YTH1YPR107C PER1P25625 357 aa8.43□□□□□ -1.06
YTH1YPR107C NAM7P30771 971 aaKnown RBP8.43□□□□□ -1.06
YTH1YPR107C YBR071WP38243 211 aa8.43□□□□□ -1.06
YTH1YPR107C SAF1P38352 637 aa8.43□□□□□ -1.06
YTH1YPR107C YAP1801P38856 637 aa8.43□□□□□ -1.06
YTH1YPR107C YFL066CP43538 392 aa8.43□□□□□ -1.06
YTH1YPR107C YJR120WP47157 116 aa8.43□□□□□ -1.06
YTH1YPR107C HFM1P51979 1187 aa8.43□□□□□ -1.06
YTH1YPR107C TRE1Q08919 783 aa8.43□□□□□ -1.06
YTH1YPR107C GUP2Q08929 609 aa8.43□□□□□ -1.06
YTH1YPR107C GIN4Q12263 1142 aa8.43□□□□□ -1.06
YTH1YPR107C MSB1P21339 1137 aaKnown RBP8.42□□□□□ -1.06
YTH1YPR107C EUG1P32474 517 aa8.42□□□□□ -1.06
YTH1YPR107C ECM21P38167 1117 aaKnown RBP8.42□□□□□ -1.06
YTH1YPR107C RFC5P38251 354 aa8.42□□□□□ -1.06
YTH1YPR107C DOT6P40059 670 aaKnown RBP8.42□□□□□ -1.06
YTH1YPR107C ALY2P47029 1046 aa8.42□□□□□ -1.06
YTH1YPR107C YJR096WP47137 282 aa8.42□□□□□ -1.06
YTH1YPR107C NSG2P53898 299 aa8.42□□□□□ -1.06
YTH1YPR107C NHX1Q04121 633 aa8.42□□□□□ -1.06
YTH1YPR107C ATG33Q06485 197 aa8.42□□□□□ -1.06
YTH1YPR107C YTM1Q12024 460 aaPredicted RBP8.42□□□□□ -1.06
YTH1YPR107C DAL7P21826 554 aa8.41□□□□□ -1.06
YTH1YPR107C COQ2P32378 372 aa8.41□□□□□ -1.06
YTH1YPR107C TAT1P38085 619 aa8.41□□□□□ -1.06
YTH1YPR107C OYE3P41816 400 aaPredicted RBP8.41□□□□□ -1.06
YTH1YPR107C TAD1P53065 400 aa8.41□□□□□ -1.06
YTH1YPR107C YDR215CQ12240 137 aa8.41□□□□□ -1.06
YTH1YPR107C SPS1P08458 490 aa8.4□□□□□ -1.06
YTH1YPR107C KIN2P13186 1147 aaKnown RBP8.4□□□□□ -1.06
YTH1YPR107C URA1P28272 314 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms