RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C DRS1P32892 752 aaKnown RBP19.12■□□□□ 0.65
YTH1YPR107C MTC1P47018 478 aaKnown RBP18.33■□□□□ 0.52
YTH1YPR107C BFR2Q06631 534 aaKnown RBP16.89■□□□□ 0.29
YTH1YPR107C TFA1P36100 482 aa16.39■□□□□ 0.21
YTH1YPR107C DIP2Q12220 943 aaPredicted RBP16.04■□□□□ 0.16
YTH1YPR107C AVT3P36062 692 aa16■□□□□ 0.15
YTH1YPR107C RSE1Q04693 1361 aaKnown RBP14.98□□□□□ -0.01
YTH1YPR107C RQC2Q12532 1038 aaKnown RBP14.83□□□□□ -0.04
YTH1YPR107C ISW2Q08773 1120 aa14.82□□□□□ -0.04
YTH1YPR107C RPG1P38249 964 aaKnown RBP14.52□□□□□ -0.09
YTH1YPR107C RPL17AP05740 184 aaKnown RBP14.35□□□□□ -0.11
YTH1YPR107C RPL17BP46990 184 aaKnown RBP14.35□□□□□ -0.11
YTH1YPR107C PRI1P10363 409 aa14.31□□□□□ -0.12
YTH1YPR107C FAP1P53971 965 aa14.25□□□□□ -0.13
YTH1YPR107C REB1P21538 810 aa14.14□□□□□ -0.15
YTH1YPR107C AAD16Q02895 342 aa14□□□□□ -0.17
YTH1YPR107C SPT21P35209 758 aa13.84□□□□□ -0.19
YTH1YPR107C RIM101P33400 625 aa13.83□□□□□ -0.2
YTH1YPR107C PTP3P40048 928 aa13.78□□□□□ -0.2
YTH1YPR107C DMA1P38823 416 aa13.72□□□□□ -0.21
YTH1YPR107C TSR3Q12094 313 aaKnown RBP13.6□□□□□ -0.23
YTH1YPR107C SSP1P38871 571 aa13.57□□□□□ -0.24
YTH1YPR107C PRY3P47033 881 aa13.4□□□□□ -0.26
YTH1YPR107C OXP1P28273 1286 aa13.38□□□□□ -0.27
YTH1YPR107C ARP8Q12386 881 aaKnown RBP RIP-Chip data13.35□□□□□ -0.27not detected
YTH1YPR107C YIL055CP40523 627 aaKnown RBP13.3□□□□□ -0.28
YTH1YPR107C YAH1Q12184 172 aaKnown RBP13.3□□□□□ -0.28
YTH1YPR107C YKR023WP36119 530 aaKnown RBP13.21□□□□□ -0.29
YTH1YPR107C MRPL32P25348 183 aa13.15□□□□□ -0.3
YTH1YPR107C YLR271WQ06152 274 aa13.15□□□□□ -0.3
YTH1YPR107C RSM7P47150 247 aa13.05□□□□□ -0.32
YTH1YPR107C MGA2P40578 1113 aa13.03□□□□□ -0.32
YTH1YPR107C TAF7Q05021 590 aa13.01□□□□□ -0.33
YTH1YPR107C TFC8Q12308 588 aa12.98□□□□□ -0.33
YTH1YPR107C HOP09932 586 aa12.94□□□□□ -0.34
YTH1YPR107C LEO1P38439 464 aa12.94□□□□□ -0.34
YTH1YPR107C SAS10Q12136 610 aaPredicted RBP12.81□□□□□ -0.36
YTH1YPR107C DCD1P06773 312 aa12.77□□□□□ -0.37
YTH1YPR107C CST9Q06032 482 aa12.77□□□□□ -0.37
YTH1YPR107C AI2P03876 854 aa12.75□□□□□ -0.37
YTH1YPR107C CDC27P38042 758 aa12.75□□□□□ -0.37
YTH1YPR107C PSD2P53037 1138 aaKnown RBP12.74□□□□□ -0.37
YTH1YPR107C LEU3P08638 886 aa12.7□□□□□ -0.38
YTH1YPR107C BBC1P47068 1157 aa12.7□□□□□ -0.38
YTH1YPR107C YCK3P39962 524 aa12.68□□□□□ -0.38
YTH1YPR107C HAA1Q12753 694 aaKnown RBP12.63□□□□□ -0.39
YTH1YPR107C BCH2P36122 765 aa12.62□□□□□ -0.39
YTH1YPR107C EPS1P40557 701 aa12.47□□□□□ -0.41
YTH1YPR107C RAM2P29703 316 aa12.42□□□□□ -0.42
YTH1YPR107C MRM1P25270 412 aa12.39□□□□□ -0.43
YTH1YPR107C SET1P38827 1080 aaKnown RBP12.37□□□□□ -0.43
YTH1YPR107C BDF1P35817 686 aa12.35□□□□□ -0.43
YTH1YPR107C IFH1P39520 1085 aa12.35□□□□□ -0.43
YTH1YPR107C CKB1P43639 278 aa12.34□□□□□ -0.43
YTH1YPR107C RTG3P38165 486 aa12.33□□□□□ -0.44
YTH1YPR107C RPN1P38764 993 aaKnown RBP12.32□□□□□ -0.44
YTH1YPR107C SCY1P53009 804 aa12.29□□□□□ -0.44
YTH1YPR107C YPR148CQ06523 435 aa12.29□□□□□ -0.44
YTH1YPR107C SPB4P25808 606 aaPredicted RBP12.25□□□□□ -0.45
YTH1YPR107C RCR1P38212 213 aa12.24□□□□□ -0.45
YTH1YPR107C VPS70P47161 811 aa12.24□□□□□ -0.45
YTH1YPR107C UBP10P53874 792 aaPredicted RBP12.24□□□□□ -0.45
YTH1YPR107C MAK11P20484 414 aaKnown RBP12.23□□□□□ -0.45
YTH1YPR107C MAP2P38174 421 aaKnown RBP12.14□□□□□ -0.47
YTH1YPR107C SLX5P32828 619 aaKnown RBP12.06□□□□□ -0.48
YTH1YPR107C YGL015CP33199 130 aa12.06□□□□□ -0.48
YTH1YPR107C VPS29P38759 282 aa12.06□□□□□ -0.48
YTH1YPR107C NOP53Q12080 455 aaKnown RBP12.06□□□□□ -0.48
YTH1YPR107C COQ8P27697 501 aa12.04□□□□□ -0.48
YTH1YPR107C DSF2P38213 736 aa12.02□□□□□ -0.49
YTH1YPR107C PBS2P08018 668 aa12□□□□□ -0.49
YTH1YPR107C YMR1P47147 688 aaKnown RBP RIP-Chip data11.99□□□□□ -0.49not detected
YTH1YPR107C DMA2P53924 522 aa11.97□□□□□ -0.49
YTH1YPR107C MIF2P35201 549 aa11.91□□□□□ -0.5
YTH1YPR107C YNR021WP53723 404 aaKnown RBP11.89□□□□□ -0.51
YTH1YPR107C REF2P42073 533 aaPredicted RBP11.88□□□□□ -0.51
YTH1YPR107C STS1P38637 319 aa11.86□□□□□ -0.51
YTH1YPR107C MAM3Q12296 706 aa11.86□□□□□ -0.51
YTH1YPR107C DBP1P24784 617 aaKnown RBP11.85□□□□□ -0.51
YTH1YPR107C EDS1P38073 919 aa11.82□□□□□ -0.52
YTH1YPR107C YOR238WQ08634 303 aa11.82□□□□□ -0.52
YTH1YPR107C YFR006WP43590 535 aa11.8□□□□□ -0.52
YTH1YPR107C MAK21Q12176 1025 aaKnown RBP11.8□□□□□ -0.52
YTH1YPR107C KIN1P13185 1064 aa11.78□□□□□ -0.52
YTH1YPR107C TIF4632P39936 914 aaKnown RBP11.78□□□□□ -0.52
YTH1YPR107C AIM7Q12156 149 aa11.77□□□□□ -0.53
YTH1YPR107C NSR1P27476 414 aaKnown RBP RIP-Chip data11.75□□□□□ -0.53not detected
YTH1YPR107C IES2P40154 320 aa11.75□□□□□ -0.53
YTH1YPR107C HGH1P48362 394 aaKnown RBP11.75□□□□□ -0.53
YTH1YPR107C PTC3P34221 468 aaKnown RBP11.74□□□□□ -0.53
YTH1YPR107C RLF2Q12495 606 aa11.73□□□□□ -0.53
YTH1YPR107C GLC3P32775 704 aa11.7□□□□□ -0.54
YTH1YPR107C COX6P00427 148 aa11.69□□□□□ -0.54
YTH1YPR107C YAP5P40574 245 aa11.69□□□□□ -0.54
YTH1YPR107C NUP42P49686 430 aaKnown RBP11.67□□□□□ -0.54
YTH1YPR107C DIT2P21595 489 aa11.65□□□□□ -0.54
YTH1YPR107C TGL3P40308 642 aa11.64□□□□□ -0.55
YTH1YPR107C ATF2P53296 535 aa11.61□□□□□ -0.55
YTH1YPR107C VMA1P17255 1071 aaKnown RBP11.59□□□□□ -0.55
YTH1YPR107C ATH1P48016 1211 aa11.59□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms