RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W RRP1P35178 278 aaPredicted RBP4.02□□□□□ -1.77
SWI1YPL016W GTT3P39996 337 aa4.02□□□□□ -1.77
SWI1YPL016W ARB1P40024 610 aaKnown RBP4.02□□□□□ -1.77
SWI1YPL016W SSN8P47821 323 aa4.02□□□□□ -1.77
SWI1YPL016W BPL1P48445 690 aaPredicted RBP4.02□□□□□ -1.77
SWI1YPL016W TBF1Q02457 562 aa4.02□□□□□ -1.77
SWI1YPL016W PDE2P06776 526 aa4.02□□□□□ -1.77
SWI1YPL016W PDR1P12383 1068 aa4.02□□□□□ -1.77
SWI1YPL016W CKI1P20485 582 aa4.02□□□□□ -1.77
SWI1YPL016W SUV3P32580 737 aa4.02□□□□□ -1.77
SWI1YPL016W RCN1P36054 211 aa4.02□□□□□ -1.77
SWI1YPL016W BOI1P38041 980 aaKnown RBP4.02□□□□□ -1.77
SWI1YPL016W RFC2P40348 353 aa4.02□□□□□ -1.77
SWI1YPL016W THI6P41835 540 aa4.02□□□□□ -1.77
SWI1YPL016W CTF18P49956 741 aa4.02□□□□□ -1.77
SWI1YPL016W STE23Q06010 1027 aa4.02□□□□□ -1.77
SWI1YPL016W AVO1Q08236 1176 aa4.02□□□□□ -1.77
SWI1YPL016W CDC37P06101 506 aaKnown RBP4.02□□□□□ -1.77
SWI1YPL016W GCD2P12754 651 aaPredicted RBP4.02□□□□□ -1.77
SWI1YPL016W PLC1P32383 869 aa4.02□□□□□ -1.77
SWI1YPL016W ALG14P38242 237 aa4.02□□□□□ -1.77
SWI1YPL016W NPT1P39683 429 aaKnown RBP4.02□□□□□ -1.77
SWI1YPL016W SDS3P40505 327 aa4.02□□□□□ -1.77
SWI1YPL016W SPO1P53541 631 aa4.02□□□□□ -1.77
SWI1YPL016W UBP16Q02863 499 aa4.02□□□□□ -1.77
SWI1YPL016W CWC15Q03772 175 aaKnown RBP4.02□□□□□ -1.77
SWI1YPL016W CHS5Q12114 671 aaKnown RBP4.02□□□□□ -1.77
SWI1YPL016W OCA6Q12454 224 aa4.02□□□□□ -1.77
SWI1YPL016W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SWI1YPL016W STE5P32917 917 aa4.01□□□□□ -1.77
SWI1YPL016W UTP11P34247 250 aaPredicted RBP4.01□□□□□ -1.77
SWI1YPL016W SSZ1P38788 538 aaKnown RBP4.01□□□□□ -1.77
SWI1YPL016W SPC72P39723 622 aa4.01□□□□□ -1.77
SWI1YPL016W FAR7P43592 221 aa4.01□□□□□ -1.77
SWI1YPL016W TMA22P47089 198 aaPredicted RBP4.01□□□□□ -1.77
SWI1YPL016W SDA1P53313 767 aaKnown RBP4.01□□□□□ -1.77
SWI1YPL016W RBA50Q04418 439 aa4.01□□□□□ -1.77
SWI1YPL016W ATG23Q06671 453 aa4.01□□□□□ -1.77
SWI1YPL016W IES3Q12345 250 aa4.01□□□□□ -1.77
SWI1YPL016W IRA2P19158 3079 aa4.01□□□□□ -1.77
SWI1YPL016W PHO13P19881 312 aa4.01□□□□□ -1.77
SWI1YPL016W SFL1P20134 766 aa4.01□□□□□ -1.77
SWI1YPL016W DPB3P27344 201 aa4.01□□□□□ -1.77
SWI1YPL016W RPC19P28000 142 aaKnown RBP4.01□□□□□ -1.77
SWI1YPL016W EXO84P38261 753 aa4.01□□□□□ -1.77
SWI1YPL016W RCK2P38623 610 aa4.01□□□□□ -1.77
SWI1YPL016W TDA3P38758 523 aa4.01□□□□□ -1.77
SWI1YPL016W VID27P40157 782 aa4.01□□□□□ -1.77
SWI1YPL016W DAS1P47005 663 aa4.01□□□□□ -1.77
SWI1YPL016W MRM2P53123 320 aa4.01□□□□□ -1.77
SWI1YPL016W ACF2Q12168 779 aa4.01□□□□□ -1.77
SWI1YPL016W COQ4O13525 335 aa4.01□□□□□ -1.77
SWI1YPL016W HSF1P10961 833 aa4.01□□□□□ -1.77
SWI1YPL016W TRM1P15565 570 aaKnown RBP4.01□□□□□ -1.77
SWI1YPL016W ADE2P21264 571 aaKnown RBP4.01□□□□□ -1.77
SWI1YPL016W PUF4P25339 888 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SWI1YPL016W ATG14P38270 344 aa4.01□□□□□ -1.77
SWI1YPL016W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SWI1YPL016W IML2P47031 731 aa4.01□□□□□ -1.77
SWI1YPL016W YNL040WP53960 456 aaPredicted RBP4.01□□□□□ -1.77
SWI1YPL016W SGT1Q08446 395 aa4.01□□□□□ -1.77
SWI1YPL016W RRP6Q12149 733 aaKnown RBP4.01□□□□□ -1.77
SWI1YPL016W BBP1Q12365 385 aa4.01□□□□□ -1.77
SWI1YPL016W PMS1P14242 873 aa4□□□□□ -1.77
SWI1YPL016W CLB3P24870 427 aa4□□□□□ -1.77
SWI1YPL016W PRX1P34227 261 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W RDH54P38086 958 aa4□□□□□ -1.77
SWI1YPL016W BSD2P38356 321 aa4□□□□□ -1.77
SWI1YPL016W CCT4P39078 528 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W UBP6P43593 499 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W HFM1P51979 1187 aa4□□□□□ -1.77
SWI1YPL016W TAD1P53065 400 aa4□□□□□ -1.77
SWI1YPL016W USA1Q03714 838 aa4□□□□□ -1.77
SWI1YPL016W ARX1Q03862 593 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W ARV1Q06541 321 aa4□□□□□ -1.77
SWI1YPL016W ADY3Q07732 790 aa4□□□□□ -1.77
SWI1YPL016W PDC1P06169 563 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W LCB1P25045 558 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W CDC3P32457 520 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W ARP9Q05123 467 aa4□□□□□ -1.77
SWI1YPL016W RPS6AP0CX37 236 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W RPS6BP0CX38 236 aaPredicted RBP4□□□□□ -1.77
SWI1YPL016W MSS116P15424 664 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W IDI1P15496 288 aa4□□□□□ -1.77
SWI1YPL016W NPL6P32832 435 aa4□□□□□ -1.77
SWI1YPL016W PTC3P34221 468 aaKnown RBP4□□□□□ -1.77
SWI1YPL016W DSE1P40077 573 aa4□□□□□ -1.77
SWI1YPL016W MEP1P40260 492 aa4□□□□□ -1.77
SWI1YPL016W TRS85P46944 698 aa4□□□□□ -1.77
SWI1YPL016W MRPS35P53292 345 aa4□□□□□ -1.77
SWI1YPL016W CSI1Q04368 295 aa4□□□□□ -1.77
SWI1YPL016W HFD1Q04458 532 aa4□□□□□ -1.77
SWI1YPL016W PTC5Q12511 572 aa4□□□□□ -1.77
SWI1YPL016W SUP45P12385 437 aaKnown RBP3.99□□□□□ -1.77
SWI1YPL016W TYR1P20049 452 aa3.99□□□□□ -1.77
SWI1YPL016W SPT8P38915 602 aa3.99□□□□□ -1.77
SWI1YPL016W MNN11P46985 422 aaKnown RBP3.99□□□□□ -1.77
SWI1YPL016W ATG1P53104 897 aa3.99□□□□□ -1.77
SWI1YPL016W COG2P53271 262 aa3.99□□□□□ -1.77
SWI1YPL016W ASI1P54074 624 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 87.4 ms