RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W RIM8P53179 542 aa4.05□□□□□ -1.76
RRI2YOL117W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
RRI2YOL117W RPN4Q03465 531 aa4.05□□□□□ -1.76
RRI2YOL117W ROT1Q03691 256 aa4.05□□□□□ -1.76
RRI2YOL117W CDA1Q06702 301 aa4.05□□□□□ -1.76
RRI2YOL117W MND2P40577 368 aa4.04□□□□□ -1.76
RRI2YOL117W YGR125WP53273 1036 aa4.04□□□□□ -1.76
RRI2YOL117W ADY3Q07732 790 aa4.04□□□□□ -1.76
RRI2YOL117W OSH2Q12451 1283 aa4.04□□□□□ -1.76
RRI2YOL117W CAN1P04817 590 aa4.03□□□□□ -1.76
RRI2YOL117W TOP3P13099 656 aa4.03□□□□□ -1.76
RRI2YOL117W RPC82P32349 654 aa4.03□□□□□ -1.76
RRI2YOL117W DOM34P33309 386 aa4.03□□□□□ -1.76
RRI2YOL117W PET10P36139 283 aa4.03□□□□□ -1.76
RRI2YOL117W UBP5P39944 805 aa4.03□□□□□ -1.76
RRI2YOL117W TOK1P40310 691 aa4.03□□□□□ -1.76
RRI2YOL117W VPS62P53285 467 aa4.03□□□□□ -1.76
RRI2YOL117W LCD1Q04377 747 aa4.03□□□□□ -1.76
RRI2YOL117W ARE1P25628 610 aa4.03□□□□□ -1.76
RRI2YOL117W PPH3P32345 308 aa4.03□□□□□ -1.76
RRI2YOL117W BET3P36149 193 aa4.03□□□□□ -1.76
RRI2YOL117W YRO2P38079 344 aa4.03□□□□□ -1.76
RRI2YOL117W YBR284WP38150 797 aa4.03□□□□□ -1.76
RRI2YOL117W CCC2P38995 1004 aa4.03□□□□□ -1.76
RRI2YOL117W YER158CP40095 573 aa4.03□□□□□ -1.76
RRI2YOL117W IRC24P40580 263 aa4.03□□□□□ -1.76
RRI2YOL117W CDC53Q12018 815 aaKnown RBP4.03□□□□□ -1.76
RRI2YOL117W YPR071WQ12346 211 aa4.03□□□□□ -1.76
RRI2YOL117W MSD1P15179 658 aaKnown RBP4.02□□□□□ -1.77
RRI2YOL117W PRE10P21242 288 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
RRI2YOL117W CDC20P26309 610 aa4.02□□□□□ -1.77
RRI2YOL117W CDC11P32458 415 aa4.02□□□□□ -1.77
RRI2YOL117W RTA1P53047 317 aa4.02□□□□□ -1.77
RRI2YOL117W HMI1Q12039 706 aa4.02□□□□□ -1.77
RRI2YOL117W CDC48P25694 835 aaKnown RBP4.01□□□□□ -1.77
RRI2YOL117W ZRG8P40021 1076 aa4.01□□□□□ -1.77
RRI2YOL117W MET12P46151 657 aa4.01□□□□□ -1.77
RRI2YOL117W YGR012WP53206 393 aa4.01□□□□□ -1.77
RRI2YOL117W TPO2P53283 614 aa4.01□□□□□ -1.77
RRI2YOL117W TPO1Q07824 586 aa4.01□□□□□ -1.77
RRI2YOL117W GPB1Q08886 897 aa4.01□□□□□ -1.77
RRI2YOL117W SRP40P32583 406 aaPredicted RBP4.01□□□□□ -1.77
RRI2YOL117W UBP6P43593 499 aaKnown RBP4.01□□□□□ -1.77
RRI2YOL117W CHA4P43634 648 aa4.01□□□□□ -1.77
RRI2YOL117W CCM1P48237 864 aaPredicted RBP4.01□□□□□ -1.77
RRI2YOL117W GCV2P49095 1034 aa4.01□□□□□ -1.77
RRI2YOL117W PBP1P53297 722 aaKnown RBP4.01□□□□□ -1.77
RRI2YOL117W YTA7P40340 1379 aa4□□□□□ -1.77
RRI2YOL117W HSF1P10961 833 aa4□□□□□ -1.77
RRI2YOL117W REC104P33323 182 aa4□□□□□ -1.77
RRI2YOL117W TOD6P34219 525 aa4□□□□□ -1.77
RRI2YOL117W GGA2P38817 585 aaKnown RBP4□□□□□ -1.77
RRI2YOL117W HUL4P40985 892 aa4□□□□□ -1.77
RRI2YOL117W ORC1P54784 914 aaPredicted RBP4□□□□□ -1.77
RRI2YOL117W ACK1Q07622 623 aaPredicted RBP4□□□□□ -1.77
RRI2YOL117W FBP1P09201 348 aa3.99□□□□□ -1.77
RRI2YOL117W SRP101P32916 621 aa3.99□□□□□ -1.77
RRI2YOL117W PBP2P38151 413 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
RRI2YOL117W URM1P40554 99 aaPredicted RBP3.99□□□□□ -1.77
RRI2YOL117W RXT3Q07458 294 aa3.99□□□□□ -1.77
RRI2YOL117W EMC1P25574 760 aa3.99□□□□□ -1.77
RRI2YOL117W CHZ1P40019 153 aaPredicted RBP3.99□□□□□ -1.77
RRI2YOL117W SPT20P50875 604 aa3.99□□□□□ -1.77
RRI2YOL117W GTF1P53260 183 aaPredicted RBP3.99□□□□□ -1.77
RRI2YOL117W ENV7Q12003 364 aa3.99□□□□□ -1.77
RRI2YOL117W HIS5P07172 385 aa3.98□□□□□ -1.77
RRI2YOL117W SPE1P08432 466 aa3.98□□□□□ -1.77
RRI2YOL117W CIT2P08679 460 aa3.98□□□□□ -1.77
RRI2YOL117W ENA1P13587 1091 aa3.98□□□□□ -1.77
RRI2YOL117W YKL091CP33324 310 aaKnown RBP3.98□□□□□ -1.77
RRI2YOL117W LST4P34239 828 aa3.98□□□□□ -1.77
RRI2YOL117W FLR1P38124 548 aa3.98□□□□□ -1.77
RRI2YOL117W POA1P38218 177 aa3.98□□□□□ -1.77
RRI2YOL117W MAL11P53048 616 aa3.98□□□□□ -1.77
RRI2YOL117W HDA1P53973 706 aa3.98□□□□□ -1.77
RRI2YOL117W ENA2Q01896 1091 aa3.98□□□□□ -1.77
RRI2YOL117W YAP6Q03935 383 aa3.98□□□□□ -1.77
RRI2YOL117W YDL124WQ07551 312 aaKnown RBP3.98□□□□□ -1.77
RRI2YOL117W NOP12Q08208 459 aaKnown RBP3.98□□□□□ -1.77
RRI2YOL117W YOR352WQ08816 343 aa3.98□□□□□ -1.77
RRI2YOL117W ENA5Q12691 1091 aa3.98□□□□□ -1.77
RRI2YOL117W NOT3P06102 836 aaKnown RBP3.97□□□□□ -1.77
RRI2YOL117W SCT1P32784 759 aa3.97□□□□□ -1.77
RRI2YOL117W STE13P33894 931 aa3.97□□□□□ -1.77
RRI2YOL117W TAF1P46677 1066 aa3.97□□□□□ -1.77
RRI2YOL117W RAI1P53063 387 aaKnown RBP3.97□□□□□ -1.77
RRI2YOL117W YLR224WQ05947 369 aa3.97□□□□□ -1.77
RRI2YOL117W YPR196WQ06595 470 aa3.97□□□□□ -1.77
RRI2YOL117W YLR358CO13565 187 aa3.97□□□□□ -1.77
RRI2YOL117W ERR1P0CX10 437 aa3.97□□□□□ -1.77
RRI2YOL117W ERR2P0CX11 437 aa3.97□□□□□ -1.77
RRI2YOL117W GAL11P19659 1081 aa3.97□□□□□ -1.77
RRI2YOL117W TY4A-JP47023 414 aa3.97□□□□□ -1.77
RRI2YOL117W YGR283CP53336 341 aaPredicted RBP3.97□□□□□ -1.77
RRI2YOL117W YOR131CQ12486 218 aa3.97□□□□□ -1.77
RRI2YOL117W STE14P32584 239 aa3.96□□□□□ -1.78
RRI2YOL117W TIM23P32897 222 aa3.96□□□□□ -1.78
RRI2YOL117W ATG19P35193 415 aa3.96□□□□□ -1.78
RRI2YOL117W GYP8P43570 497 aa3.96□□□□□ -1.78
RRI2YOL117W NCS6P53088 359 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms