RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W YPR196WQ06595 470 aa5.87□□□□□ -1.47
CPR8YNR028W ENA5Q12691 1091 aa5.87□□□□□ -1.47
CPR8YNR028W SRP40P32583 406 aaPredicted RBP5.86□□□□□ -1.47
CPR8YNR028W YKR078WP36158 585 aaKnown RBP5.86□□□□□ -1.47
CPR8YNR028W YBR284WP38150 797 aa5.86□□□□□ -1.47
CPR8YNR028W YHR020WP38708 688 aaKnown RBP5.86□□□□□ -1.47
CPR8YNR028W UBP5P39944 805 aa5.86□□□□□ -1.47
CPR8YNR028W YER158CP40095 573 aa5.86□□□□□ -1.47
CPR8YNR028W HUL4P40985 892 aa5.86□□□□□ -1.47
CPR8YNR028W SPT20P50875 604 aa5.86□□□□□ -1.47
CPR8YNR028W YDR132CQ03900 495 aa5.86□□□□□ -1.47
CPR8YNR028W NPP1P25353 742 aa5.85□□□□□ -1.47
CPR8YNR028W RPC82P32349 654 aa5.85□□□□□ -1.47
CPR8YNR028W AFR1P33304 620 aa5.85□□□□□ -1.47
CPR8YNR028W TSL1P38427 1098 aaKnown RBP5.85□□□□□ -1.47
CPR8YNR028W GTF1P53260 183 aaPredicted RBP5.85□□□□□ -1.47
CPR8YNR028W YPR071WQ12346 211 aa5.85□□□□□ -1.47
CPR8YNR028W YOR131CQ12486 218 aa5.85□□□□□ -1.47
CPR8YNR028W HBN1Q96VH4 193 aa5.85□□□□□ -1.47
CPR8YNR028W CDC48P25694 835 aaKnown RBP5.84□□□□□ -1.47
CPR8YNR028W SRP101P32916 621 aa5.84□□□□□ -1.47
CPR8YNR028W TOD6P34219 525 aa5.84□□□□□ -1.47
CPR8YNR028W MND2P40577 368 aa5.84□□□□□ -1.47
CPR8YNR028W YGR012WP53206 393 aa5.84□□□□□ -1.47
CPR8YNR028W LCD1Q04377 747 aa5.84□□□□□ -1.47
CPR8YNR028W DUS4Q06063 367 aa5.84□□□□□ -1.47
CPR8YNR028W RXT3Q07458 294 aa5.84□□□□□ -1.47
CPR8YNR028W YDL124WQ07551 312 aaKnown RBP5.84□□□□□ -1.47
CPR8YNR028W GPB1Q08886 897 aa5.84□□□□□ -1.47
CPR8YNR028W THI80P35202 319 aa5.83□□□□□ -1.48
CPR8YNR028W RSP5P39940 809 aaKnown RBP5.83□□□□□ -1.48
CPR8YNR028W CCM1P48237 864 aaPredicted RBP5.83□□□□□ -1.48
CPR8YNR028W GCV2P49095 1034 aa5.83□□□□□ -1.48
CPR8YNR028W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48 RIP-Chip
CPR8YNR028W CDA1Q06702 301 aa5.83□□□□□ -1.48
CPR8YNR028W HSF1P10961 833 aa5.82□□□□□ -1.48
CPR8YNR028W YKL091CP33324 310 aaKnown RBP5.82□□□□□ -1.48
CPR8YNR028W ERT1P38140 529 aa5.82□□□□□ -1.48
CPR8YNR028W POA1P38218 177 aa5.82□□□□□ -1.48
CPR8YNR028W GGA2P38817 585 aaKnown RBP5.82□□□□□ -1.48
CPR8YNR028W TOK1P40310 691 aa5.82□□□□□ -1.48
CPR8YNR028W TAF8Q03750 510 aa5.82□□□□□ -1.48
CPR8YNR028W BUL2Q03758 920 aaKnown RBP5.82□□□□□ -1.48
CPR8YNR028W TPO1Q07824 586 aa5.82□□□□□ -1.48
CPR8YNR028W MSD1P15179 658 aaKnown RBP5.81□□□□□ -1.48
CPR8YNR028W GAL11P19659 1081 aa5.81□□□□□ -1.48
CPR8YNR028W REC104P33323 182 aa5.81□□□□□ -1.48
CPR8YNR028W PET10P36139 283 aa5.81□□□□□ -1.48
CPR8YNR028W YBR238CP38330 731 aaKnown RBP5.81□□□□□ -1.48
CPR8YNR028W PSP2P50109 593 aaKnown RBP5.81□□□□□ -1.48
CPR8YNR028W YKE2P52553 114 aa5.81□□□□□ -1.48
CPR8YNR028W ACK1Q07622 623 aaPredicted RBP5.81□□□□□ -1.48
CPR8YNR028W CAN1P04817 590 aa5.8□□□□□ -1.48
CPR8YNR028W CDC6P09119 513 aa5.8□□□□□ -1.48
CPR8YNR028W TOP3P13099 656 aa5.8□□□□□ -1.48
CPR8YNR028W EMC1P25574 760 aa5.8□□□□□ -1.48
CPR8YNR028W DOM34P33309 386 aa5.8□□□□□ -1.48
CPR8YNR028W HMI1Q12039 706 aa5.8□□□□□ -1.48
CPR8YNR028W CDC20P26309 610 aa5.79□□□□□ -1.48
CPR8YNR028W VPS62P53285 467 aa5.79□□□□□ -1.48
CPR8YNR028W RPN4Q03465 531 aa5.79□□□□□ -1.48
CPR8YNR028W ADY3Q07732 790 aa5.79□□□□□ -1.48
CPR8YNR028W YLR358CO13565 187 aa5.78□□□□□ -1.48
CPR8YNR028W RPP2AP05319 106 aaKnown RBP5.78□□□□□ -1.48
CPR8YNR028W NOT3P06102 836 aaKnown RBP5.78□□□□□ -1.48
CPR8YNR028W TOM70P07213 617 aaKnown RBP5.78□□□□□ -1.48
CPR8YNR028W SPE1P08432 466 aa5.78□□□□□ -1.48
CPR8YNR028W PRE10P21242 288 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
CPR8YNR028W BET3P36149 193 aa5.78□□□□□ -1.48
CPR8YNR028W UBP6P43593 499 aaKnown RBP5.78□□□□□ -1.48
CPR8YNR028W MET12P46151 657 aa5.78□□□□□ -1.48
CPR8YNR028W RAI1P53063 387 aaKnown RBP5.78□□□□□ -1.48
CPR8YNR028W YAP6Q03935 383 aa5.78□□□□□ -1.48
CPR8YNR028W RFA1P22336 621 aaKnown RBP5.77□□□□□ -1.49
CPR8YNR028W CHZ1P40019 153 aaPredicted RBP5.77□□□□□ -1.49
CPR8YNR028W RTA1P53047 317 aa5.77□□□□□ -1.49
CPR8YNR028W NOP12Q08208 459 aaKnown RBP5.77□□□□□ -1.49
CPR8YNR028W HIS5P07172 385 aa5.76□□□□□ -1.49
CPR8YNR028W ATG19P35193 415 aa5.76□□□□□ -1.49
CPR8YNR028W PBP2P38151 413 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
CPR8YNR028W VPS30Q02948 557 aa5.76□□□□□ -1.49
CPR8YNR028W PPM2Q08282 695 aa5.76□□□□□ -1.49
CPR8YNR028W YTA7P40340 1379 aa5.76□□□□□ -1.49
CPR8YNR028W FLR1P38124 548 aa5.75□□□□□ -1.49
CPR8YNR028W YLR224WQ05947 369 aa5.75□□□□□ -1.49
CPR8YNR028W STE13P33894 931 aa5.74□□□□□ -1.49
CPR8YNR028W NIT3P49954 291 aa5.74□□□□□ -1.49
CPR8YNR028W ESC8Q08119 714 aa5.74□□□□□ -1.49
CPR8YNR028W ENV7Q12003 364 aa5.74□□□□□ -1.49
CPR8YNR028W TIM23P32897 222 aa5.73□□□□□ -1.49
CPR8YNR028W LST4P34239 828 aa5.73□□□□□ -1.49
CPR8YNR028W CEP3P40969 608 aa5.73□□□□□ -1.49
CPR8YNR028W BUD6P41697 788 aa5.73□□□□□ -1.49
CPR8YNR028W CHA4P43634 648 aa5.73□□□□□ -1.49
CPR8YNR028W CLU1Q03690 1277 aaKnown RBP5.73□□□□□ -1.49
CPR8YNR028W TMA10Q06177 86 aa5.73□□□□□ -1.49
CPR8YNR028W WHI4Q07655 649 aaKnown RBP5.73□□□□□ -1.49
CPR8YNR028W MPH2P0CD99 609 aa5.72□□□□□ -1.49
CPR8YNR028W ERR1P0CX10 437 aa5.72□□□□□ -1.49
CPR8YNR028W ERR2P0CX11 437 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms