RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W ALO1P54783 526 aaKnown RBP3.03□□□□□ -1.92
CAF120YNL278W EEB1Q02891 456 aa3.03□□□□□ -1.92
CAF120YNL278W PNP1Q05788 311 aa3.03□□□□□ -1.92
CAF120YNL278W GGA1Q06336 557 aa3.03□□□□□ -1.92
CAF120YNL278W YOL036WQ08206 761 aa3.03□□□□□ -1.92
CAF120YNL278W YOR296WQ08748 1289 aa3.03□□□□□ -1.92
CAF120YNL278W YIG1Q08956 461 aa3.03□□□□□ -1.92
CAF120YNL278W PCL8Q08966 492 aa3.03□□□□□ -1.92
CAF120YNL278W ICL2Q12031 575 aa3.03□□□□□ -1.92
CAF120YNL278W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
CAF120YNL278W CLN1P20437 546 aa3.03□□□□□ -1.92
CAF120YNL278W RAD54P32863 898 aa3.03□□□□□ -1.92
CAF120YNL278W SAS3P34218 831 aa3.03□□□□□ -1.92
CAF120YNL278W CCT5P40413 562 aaKnown RBP3.03□□□□□ -1.92
CAF120YNL278W MAL11P53048 616 aa3.03□□□□□ -1.92
CAF120YNL278W TAN1P53072 289 aaPredicted RBP3.03□□□□□ -1.92
CAF120YNL278W YGR273CP53329 174 aa3.03□□□□□ -1.92
CAF120YNL278W RPN7Q06103 429 aaKnown RBP3.03□□□□□ -1.92
CAF120YNL278W CDC53Q12018 815 aaKnown RBP3.03□□□□□ -1.92
CAF120YNL278W ERR1P0CX10 437 aa3.02□□□□□ -1.93
CAF120YNL278W ERR2P0CX11 437 aa3.02□□□□□ -1.93
CAF120YNL278W RPL8AP17076 256 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W RNR3P21672 869 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W KTR4P38131 464 aa3.02□□□□□ -1.93
CAF120YNL278W VPS41P38959 992 aa3.02□□□□□ -1.93
CAF120YNL278W FAA3P39002 694 aa3.02□□□□□ -1.93
CAF120YNL278W ALG2P43636 503 aa3.02□□□□□ -1.93
CAF120YNL278W ACF4P47129 309 aa3.02□□□□□ -1.93
CAF120YNL278W ACS2P52910 683 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W SXM1Q04175 944 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W COG8Q04632 607 aa3.02□□□□□ -1.93
CAF120YNL278W RRP9Q06506 573 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W RUD3Q12234 484 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W BMT6Q12291 365 aa3.02□□□□□ -1.93
CAF120YNL278W LDB19Q12502 818 aa3.02□□□□□ -1.93
CAF120YNL278W NCB2Q92317 146 aa3.02□□□□□ -1.93
CAF120YNL278W PEP3P27801 918 aa3.02□□□□□ -1.93
CAF120YNL278W PEX5P35056 612 aa3.02□□□□□ -1.93
CAF120YNL278W ABZ1P37254 787 aaPredicted RBP3.02□□□□□ -1.93
CAF120YNL278W POL12P38121 705 aaPredicted RBP3.02□□□□□ -1.93
CAF120YNL278W RCK2P38623 610 aa3.02□□□□□ -1.93
CAF120YNL278W YMR124WP39523 943 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W OYE3P41816 400 aaPredicted RBP3.02□□□□□ -1.93
CAF120YNL278W DCS2Q12123 353 aa3.02□□□□□ -1.93
CAF120YNL278W ATG9Q12142 997 aa3.02□□□□□ -1.93
CAF120YNL278W CIT1P00890 479 aa3.02□□□□□ -1.93
CAF120YNL278W MET6P05694 767 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W ADE3P07245 946 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W CDC10P25342 322 aaKnown RBP3.02□□□□□ -1.93
CAF120YNL278W PHO87P25360 923 aa3.02□□□□□ -1.93
CAF120YNL278W MRC1P25588 1096 aa3.02□□□□□ -1.93
CAF120YNL278W EUG1P32474 517 aa3.02□□□□□ -1.93
CAF120YNL278W PDR3P33200 976 aa3.02□□□□□ -1.93
CAF120YNL278W CBF5P33322 483 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
CAF120YNL278W YJL049WP47048 450 aa3.02□□□□□ -1.93
CAF120YNL278W YGR153WP48238 217 aa3.02□□□□□ -1.93
CAF120YNL278W YGR117CP53270 476 aa3.02□□□□□ -1.93
CAF120YNL278W VPS62P53285 467 aa3.02□□□□□ -1.93
CAF120YNL278W ESBP6P53918 673 aa3.02□□□□□ -1.93
CAF120YNL278W CLP1Q08685 445 aaPredicted RBP3.02□□□□□ -1.93
CAF120YNL278W SAM3Q08986 587 aa3.02□□□□□ -1.93
CAF120YNL278W DAS2Q12084 232 aa3.02□□□□□ -1.93
CAF120YNL278W HTA1P04911 132 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W HTA2P04912 132 aa3.01□□□□□ -1.93
CAF120YNL278W CYC8P14922 966 aa3.01□□□□□ -1.93
CAF120YNL278W DEP1P31385 405 aa3.01□□□□□ -1.93
CAF120YNL278W ISF1P32488 338 aa3.01□□□□□ -1.93
CAF120YNL278W ANP1P32629 500 aa3.01□□□□□ -1.93
CAF120YNL278W RPT1P33299 467 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W XRS2P33301 854 aa3.01□□□□□ -1.93
CAF120YNL278W SFB3P38810 929 aa3.01□□□□□ -1.93
CAF120YNL278W GPD2P41911 440 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W CWH41P53008 833 aa3.01□□□□□ -1.93
CAF120YNL278W YGR053CP53234 283 aa3.01□□□□□ -1.93
CAF120YNL278W YNL247WP53852 767 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W JJJ1P53863 590 aa3.01□□□□□ -1.93
CAF120YNL278W YPR084WQ06821 456 aa3.01□□□□□ -1.93
CAF120YNL278W RRI2Q12348 645 aa3.01□□□□□ -1.93
CAF120YNL278W MMP1Q12372 583 aa3.01□□□□□ -1.93
CAF120YNL278W DBP10Q12389 995 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W TRP2P00899 507 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W RTS1P38903 757 aa3.01□□□□□ -1.93
CAF120YNL278W RRP8P38961 392 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W NPA3P47122 385 aa3.01□□□□□ -1.93
CAF120YNL278W SPO71Q03868 1245 aa3.01□□□□□ -1.93
CAF120YNL278W VMS1Q04311 632 aaKnown RBP3.01□□□□□ -1.93
CAF120YNL278W AVO1Q08236 1176 aa3.01□□□□□ -1.93
CAF120YNL278W MCM16Q12262 181 aa3.01□□□□□ -1.93
CAF120YNL278W YGR161W-CQ3E744 92 aa3.01□□□□□ -1.93
CAF120YNL278W RAD61Q99359 647 aa3.01□□□□□ -1.93
CAF120YNL278W HEM1P09950 548 aaPredicted RBP3□□□□□ -1.93
CAF120YNL278W ECM32P32644 1121 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W LTV1P34078 463 aa3□□□□□ -1.93
CAF120YNL278W RVS167P39743 482 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W MXR1P40029 184 aa3□□□□□ -1.93
CAF120YNL278W YJR039WP47107 1121 aa3□□□□□ -1.93
CAF120YNL278W MRX6P48564 524 aa3□□□□□ -1.93
CAF120YNL278W ISA1Q07821 250 aaPredicted RBP3□□□□□ -1.93
CAF120YNL278W GRC3Q07845 632 aa3□□□□□ -1.93
CAF120YNL278W PEP5P12868 1029 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms