RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	RPB10	P22139	70 aa		7.08	□□□□□ -1.28
CSL4	YNL232W	LIP5	P32875	414 aa		7.08	□□□□□ -1.28
CSL4	YNL232W	CST26	P38226	397 aa		7.08	□□□□□ -1.28
CSL4	YNL232W	STM1	P39015	273 aa	Known RBP	7.08	□□□□□ -1.28
CSL4	YNL232W	IRC24	P40580	263 aa		7.08	□□□□□ -1.28
CSL4	YNL232W	AVT1	P47082	602 aa		7.08	□□□□□ -1.28
CSL4	YNL232W	RRI2	Q12348	645 aa		7.08	□□□□□ -1.28
CSL4	YNL232W	HEM1	P09950	548 aa	Predicted RBP	7.07	□□□□□ -1.28
CSL4	YNL232W	RRN6	P32786	894 aa		7.07	□□□□□ -1.28
CSL4	YNL232W	NTA1	P40354	457 aa		7.07	□□□□□ -1.28
CSL4	YNL232W	LEM3	P42838	414 aa		7.07	□□□□□ -1.28
CSL4	YNL232W	PIP2	P52960	996 aa		7.07	□□□□□ -1.28
CSL4	YNL232W	BUL2	Q03758	920 aa	Known RBP	7.07	□□□□□ -1.28
CSL4	YNL232W	KEL3	Q08979	651 aa	Predicted RBP	7.07	□□□□□ -1.28
CSL4	YNL232W	DAP1	Q12091	152 aa		7.07	□□□□□ -1.28
CSL4	YNL232W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	7.06	□□□□□ -1.28	not detected
CSL4	YNL232W	NOC2	P39744	710 aa	Known RBP	7.06	□□□□□ -1.28
CSL4	YNL232W	SKP2	P42843	763 aa		7.06	□□□□□ -1.28
CSL4	YNL232W	YNL193W	P53870	558 aa		7.06	□□□□□ -1.28
CSL4	YNL232W	YAF9	P53930	226 aa		7.06	□□□□□ -1.28
CSL4	YNL232W	NUM1	Q00402	2748 aa		7.05	□□□□□ -1.28
CSL4	YNL232W	SRP40	P32583	406 aa	Predicted RBP	7.05	□□□□□ -1.28
CSL4	YNL232W	MAE1	P36013	669 aa	Known RBP	7.05	□□□□□ -1.28
CSL4	YNL232W	JHD1	P40034	492 aa		7.05	□□□□□ -1.28
CSL4	YNL232W	NCE103	P53615	221 aa		7.05	□□□□□ -1.28
CSL4	YNL232W	BRE4	Q07660	1125 aa		7.05	□□□□□ -1.28
CSL4	YNL232W	PIF1	P07271	859 aa		7.04	□□□□□ -1.28
CSL4	YNL232W	TOM71	P38825	639 aa	Known RBP	7.04	□□□□□ -1.28
CSL4	YNL232W	RAD55	P38953	406 aa		7.04	□□□□□ -1.28
CSL4	YNL232W	FUN12	P39730	1002 aa	Known RBP	7.04	□□□□□ -1.28
CSL4	YNL232W	RSC8	P43609	557 aa	Known RBP	7.04	□□□□□ -1.28
CSL4	YNL232W	FOL2	P51601	243 aa	Known RBP	7.04	□□□□□ -1.28
CSL4	YNL232W	MCM6	P53091	1017 aa	Known RBP	7.04	□□□□□ -1.28
CSL4	YNL232W	RMD1	Q03441	430 aa		7.04	□□□□□ -1.28
CSL4	YNL232W	SPO71	Q03868	1245 aa		7.04	□□□□□ -1.28
CSL4	YNL232W	RPN7	Q06103	429 aa	Known RBP	7.04	□□□□□ -1.28
CSL4	YNL232W	LSO1	Q3E827	93 aa		7.04	□□□□□ -1.28
CSL4	YNL232W	CYC7	P00045	113 aa		7.03	□□□□□ -1.28
CSL4	YNL232W	GRX7	P38068	203 aa		7.03	□□□□□ -1.28
CSL4	YNL232W	NEO1	P40527	1151 aa		7.03	□□□□□ -1.28
CSL4	YNL232W	SPO74	P45819	413 aa		7.03	□□□□□ -1.28
CSL4	YNL232W	YJR124C	P47159	448 aa		7.03	□□□□□ -1.28
CSL4	YNL232W	YNR065C	P53751	1116 aa		7.03	□□□□□ -1.28
CSL4	YNL232W	ELG1	Q12050	791 aa		7.03	□□□□□ -1.28
CSL4	YNL232W	CYB2	P00175	591 aa		7.02	□□□□□ -1.29
CSL4	YNL232W	ERS1	P17261	260 aa		7.02	□□□□□ -1.29
CSL4	YNL232W	PRE8	P23639	250 aa		7.02	□□□□□ -1.29
CSL4	YNL232W	UTR4	P32626	227 aa		7.02	□□□□□ -1.29
CSL4	YNL232W	SCS3	P53012	380 aa		7.02	□□□□□ -1.29
CSL4	YNL232W	YGR125W	P53273	1036 aa		7.02	□□□□□ -1.29
CSL4	YNL232W	MAG2	Q06436	670 aa	Known RBP	7.02	□□□□□ -1.29
CSL4	YNL232W	YDL144C	Q07589	356 aa		7.02	□□□□□ -1.29
CSL4	YNL232W	YUR1	P26725	428 aa		7.01	□□□□□ -1.29
CSL4	YNL232W	IRS4	P36115	615 aa	Known RBP	7.01	□□□□□ -1.29
CSL4	YNL232W	PSY2	P40164	858 aa		7.01	□□□□□ -1.29
CSL4	YNL232W	VID30	P53076	958 aa		7.01	□□□□□ -1.29
CSL4	YNL232W	MSC6	Q08818	692 aa	Known RBP	7.01	□□□□□ -1.29
CSL4	YNL232W	SRM1	P21827	482 aa		7	□□□□□ -1.29
CSL4	YNL232W	CAD1	P24813	409 aa	Known RBP	7	□□□□□ -1.29
CSL4	YNL232W	YKR018C	P36114	725 aa		7	□□□□□ -1.29
CSL4	YNL232W	BOL3	P39724	118 aa		7	□□□□□ -1.29
CSL4	YNL232W	ALD6	P54115	500 aa	Known RBP	7	□□□□□ -1.29
CSL4	YNL232W	DAK1	P54838	584 aa	Known RBP	7	□□□□□ -1.29
CSL4	YNL232W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	7	□□□□□ -1.29	not detected
CSL4	YNL232W	HAS1	Q03532	505 aa	Known RBP	7	□□□□□ -1.29
CSL4	YNL232W	CSI1	Q04368	295 aa		7	□□□□□ -1.29
CSL4	YNL232W	GLO4	Q12320	285 aa		7	□□□□□ -1.29
CSL4	YNL232W	FKS1	P38631	1876 aa	Known RBP	6.99	□□□□□ -1.29
CSL4	YNL232W	RPP0	P05317	312 aa	Known RBP	6.99	□□□□□ -1.29
CSL4	YNL232W	POX1	P13711	748 aa		6.99	□□□□□ -1.29
CSL4	YNL232W	POT1	P27796	417 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
CSL4	YNL232W	RTP1	Q12751	981 aa		6.99	□□□□□ -1.29
CSL4	YNL232W	RAD18	P10862	487 aa		6.98	□□□□□ -1.29
CSL4	YNL232W	PYC2	P32327	1180 aa	Known RBP	6.98	□□□□□ -1.29
CSL4	YNL232W	SMC1	P32908	1225 aa		6.98	□□□□□ -1.29
CSL4	YNL232W	RDH54	P38086	958 aa		6.98	□□□□□ -1.29
CSL4	YNL232W	YGL039W	P53183	348 aa	Known RBP	6.98	□□□□□ -1.29
CSL4	YNL232W	SLD5	Q03406	294 aa		6.98	□□□□□ -1.29
CSL4	YNL232W	SKG3	Q06315	1026 aa		6.98	□□□□□ -1.29
CSL4	YNL232W	FUR4	P05316	633 aa	Known RBP	6.97	□□□□□ -1.29
CSL4	YNL232W	SAM1	P10659	382 aa	Known RBP	6.97	□□□□□ -1.29
CSL4	YNL232W	MSB1	P21339	1137 aa	Known RBP	6.97	□□□□□ -1.29
CSL4	YNL232W	SOL4	P53315	255 aa		6.97	□□□□□ -1.29
CSL4	YNL232W	YPL260W	Q08977	551 aa		6.97	□□□□□ -1.29
CSL4	YNL232W	RPS19A	P07280	144 aa	Known RBP	6.96	□□□□□ -1.3
CSL4	YNL232W	RPS19B	P07281	144 aa	Predicted RBP	6.96	□□□□□ -1.3
CSL4	YNL232W	SHP1	P34223	423 aa		6.96	□□□□□ -1.3
CSL4	YNL232W	SEA4	P38164	1038 aa		6.96	□□□□□ -1.3
CSL4	YNL232W	VPS53	P47061	822 aa		6.96	□□□□□ -1.3
CSL4	YNL232W	VPS72	Q03388	795 aa		6.96	□□□□□ -1.3
CSL4	YNL232W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected
CSL4	YNL232W	GPT2	P36148	743 aa		6.95	□□□□□ -1.3
CSL4	YNL232W	SSF1	P38789	453 aa	Predicted RBP	6.95	□□□□□ -1.3
CSL4	YNL232W	SGM1	P47166	707 aa		6.95	□□□□□ -1.3
CSL4	YNL232W	ERP3	Q12403	225 aa		6.95	□□□□□ -1.3
CSL4	YNL232W	LAM4	P38800	1345 aa		6.95	□□□□□ -1.3
CSL4	YNL232W	SAM2	P19358	384 aa	Known RBP	6.94	□□□□□ -1.3
CSL4	YNL232W	CHS3	P29465	1165 aa		6.94	□□□□□ -1.3
CSL4	YNL232W	MCM4	P30665	933 aa	Known RBP	6.94	□□□□□ -1.3
CSL4	YNL232W	TGL1	P34163	548 aa		6.94	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms