RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YJR107WP47145 328 aa5.3□□□□□ -1.56
PSE1YMR308C YML108WQ03759 105 aa5.3□□□□□ -1.56
PSE1YMR308C INP2Q03824 705 aa5.3□□□□□ -1.56
PSE1YMR308C TSR2Q06672 205 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C CHS5Q12114 671 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C SRN2Q99176 213 aa5.3□□□□□ -1.56
PSE1YMR308C ADH4P10127 382 aa5.29□□□□□ -1.56
PSE1YMR308C LRP1P38801 184 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C RTT107P38850 1070 aa5.29□□□□□ -1.56
PSE1YMR308C MBP1P39678 833 aa5.29□□□□□ -1.56
PSE1YMR308C ROK1P45818 564 aaPredicted RBP5.29□□□□□ -1.56
PSE1YMR308C KXD1P53158 218 aa5.29□□□□□ -1.56
PSE1YMR308C ABP140Q08641 628 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C SMC6Q12749 1114 aa5.29□□□□□ -1.56
PSE1YMR308C MYO4P32492 1471 aa5.29□□□□□ -1.56
PSE1YMR308C SPO16P17122 198 aa5.29□□□□□ -1.56
PSE1YMR308C ISY1P21374 235 aaPredicted RBP5.29□□□□□ -1.56
PSE1YMR308C HIR1P32479 840 aa5.29□□□□□ -1.56
PSE1YMR308C TCD1P38756 429 aa5.29□□□□□ -1.56
PSE1YMR308C RRM3P38766 723 aa5.29□□□□□ -1.56
PSE1YMR308C BSC5P53755 489 aa5.29□□□□□ -1.56
PSE1YMR308C PTA1Q01329 785 aaPredicted RBP5.29□□□□□ -1.56
PSE1YMR308C STE20Q03497 939 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C TAF12Q03761 539 aa5.29□□□□□ -1.56
PSE1YMR308C IVY1Q04934 453 aa5.29□□□□□ -1.56
PSE1YMR308C SGD1Q06132 899 aa5.29□□□□□ -1.56
PSE1YMR308C NOP6Q07623 225 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C EDE1P34216 1381 aa5.29□□□□□ -1.56
PSE1YMR308C SUI2P20459 304 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C DAL1P32375 460 aa5.29□□□□□ -1.56
PSE1YMR308C SSE1P32589 693 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C PTC3P34221 468 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C CUE2P36075 443 aaKnown RBP5.29□□□□□ -1.56
PSE1YMR308C CCZ1P38273 704 aa5.29□□□□□ -1.56
PSE1YMR308C AGE2P40529 298 aa5.29□□□□□ -1.56
PSE1YMR308C YPL109CQ02981 657 aa5.29□□□□□ -1.56
PSE1YMR308C RRN5Q02983 363 aa5.29□□□□□ -1.56
PSE1YMR308C TRS130Q03660 1102 aa5.29□□□□□ -1.56
PSE1YMR308C GAD1Q04792 585 aa5.29□□□□□ -1.56
PSE1YMR308C YAP1P19880 650 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C MIH1P23748 554 aa5.28□□□□□ -1.56
PSE1YMR308C NAM7P30771 971 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C SLX5P32828 619 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C AFR1P33304 620 aa5.28□□□□□ -1.56
PSE1YMR308C STV1P37296 890 aa5.28□□□□□ -1.56
PSE1YMR308C ATP3P38077 311 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C CBR1P38626 284 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C SMF2P38778 549 aa5.28□□□□□ -1.56
PSE1YMR308C GYP8P43570 497 aa5.28□□□□□ -1.56
PSE1YMR308C POL32P47110 350 aa5.28□□□□□ -1.56
PSE1YMR308C COP1P53622 1201 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C MRS2Q01926 470 aa5.28□□□□□ -1.56
PSE1YMR308C GMC2Q06201 188 aa5.28□□□□□ -1.56
PSE1YMR308C FRT1Q99332 602 aa5.28□□□□□ -1.56
PSE1YMR308C PBS2P08018 668 aa5.28□□□□□ -1.56
PSE1YMR308C RDS1P25611 832 aa5.28□□□□□ -1.56
PSE1YMR308C MEI4P29467 408 aa5.28□□□□□ -1.56
PSE1YMR308C MGM1P32266 881 aa5.28□□□□□ -1.56
PSE1YMR308C YJR120WP47157 116 aa5.28□□□□□ -1.56
PSE1YMR308C ERV25P54837 211 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C MED1Q12321 566 aa5.28□□□□□ -1.56
PSE1YMR308C ALG1P16661 449 aa5.28□□□□□ -1.56
PSE1YMR308C LCB1P25045 558 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C CHK1P38147 527 aa5.28□□□□□ -1.56
PSE1YMR308C MSG5P38590 489 aa5.28□□□□□ -1.56
PSE1YMR308C GPP1P41277 250 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C CIT3P43635 486 aa5.28□□□□□ -1.56
PSE1YMR308C AIP1P46680 615 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C DSE4P53753 1117 aa5.28□□□□□ -1.56
PSE1YMR308C TAF8Q03750 510 aa5.28□□□□□ -1.56
PSE1YMR308C PML39Q03760 334 aa5.28□□□□□ -1.56
PSE1YMR308C PPM2Q08282 695 aa5.28□□□□□ -1.56
PSE1YMR308C MSC6Q08818 692 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C TYW1Q08960 810 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C MAK21Q12176 1025 aaKnown RBP5.28□□□□□ -1.56
PSE1YMR308C CTT1P06115 562 aa5.27□□□□□ -1.57
PSE1YMR308C SPS22P25380 463 aa5.27□□□□□ -1.57
PSE1YMR308C JEM1P40358 645 aa5.27□□□□□ -1.57
PSE1YMR308C SKP2P42843 763 aa5.27□□□□□ -1.57
PSE1YMR308C ALB1P47019 175 aaPredicted RBP5.27□□□□□ -1.57
PSE1YMR308C COG2P53271 262 aa5.27□□□□□ -1.57
PSE1YMR308C YNL193WP53870 558 aa5.27□□□□□ -1.57
PSE1YMR308C GIM3P53900 129 aa5.27□□□□□ -1.57
PSE1YMR308C RRP17Q04031 235 aaPredicted RBP5.27□□□□□ -1.57
PSE1YMR308C UTP14Q04500 899 aaKnown RBP5.27□□□□□ -1.57
PSE1YMR308C SDH5Q08230 162 aa5.27□□□□□ -1.57
PSE1YMR308C RTT10Q08924 1013 aa5.27□□□□□ -1.57
PSE1YMR308C CIT1P00890 479 aa5.27□□□□□ -1.57
PSE1YMR308C STI1P15705 589 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
PSE1YMR308C YHI9P38765 294 aa5.27□□□□□ -1.57
PSE1YMR308C TAT2P38967 592 aa5.27□□□□□ -1.57
PSE1YMR308C SAW1P39735 261 aa5.27□□□□□ -1.57
PSE1YMR308C TMA108P40462 946 aa5.27□□□□□ -1.57
PSE1YMR308C ESBP6P53918 673 aa5.27□□□□□ -1.57
PSE1YMR308C ARP10Q04549 284 aa5.27□□□□□ -1.57
PSE1YMR308C AVL9Q12500 764 aa5.27□□□□□ -1.57
PSE1YMR308C ENA1P13587 1091 aa5.26□□□□□ -1.57
PSE1YMR308C MET8P15807 274 aa5.26□□□□□ -1.57
PSE1YMR308C DIT2P21595 489 aa5.26□□□□□ -1.57
PSE1YMR308C SSH4P32343 579 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms