RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W YLR225CQ05948 407 aaKnown RBP5.51□□□□□ -1.53
UBP8YMR223W GIC1P38785 314 aa5.5□□□□□ -1.53
UBP8YMR223W SRP1Q02821 542 aaKnown RBP5.5□□□□□ -1.53
UBP8YMR223W GUP2Q08929 609 aa5.5□□□□□ -1.53
UBP8YMR223W NAP1P25293 417 aaKnown RBP5.49□□□□□ -1.53
UBP8YMR223W HRR25P29295 494 aaKnown RBP5.48□□□□□ -1.53
UBP8YMR223W SRP101P32916 621 aa5.48□□□□□ -1.53
UBP8YMR223W SAH1P39954 449 aaKnown RBP5.48□□□□□ -1.53
UBP8YMR223W NCS6P53088 359 aa5.48□□□□□ -1.53
UBP8YMR223W NPC2Q12408 173 aa5.48□□□□□ -1.53
UBP8YMR223W AGP1P25376 633 aa5.47□□□□□ -1.53
UBP8YMR223W SBA1P28707 216 aaKnown RBP5.47□□□□□ -1.53
UBP8YMR223W OAR1P35731 278 aa5.47□□□□□ -1.53
UBP8YMR223W YPT53P36019 220 aa5.47□□□□□ -1.53
UBP8YMR223W CLN2P20438 545 aa5.46□□□□□ -1.54
UBP8YMR223W CDC12P32468 407 aaKnown RBP5.46□□□□□ -1.54
UBP8YMR223W YKR078WP36158 585 aaKnown RBP5.45□□□□□ -1.54
UBP8YMR223W FAA4P47912 694 aaKnown RBP5.45□□□□□ -1.54
UBP8YMR223W GYP7P48365 746 aa5.45□□□□□ -1.54
UBP8YMR223W MOH1P38191 138 aa5.44□□□□□ -1.54
UBP8YMR223W GDE1Q02979 1223 aa5.44□□□□□ -1.54
UBP8YMR223W PPM2Q08282 695 aa5.44□□□□□ -1.54
UBP8YMR223W KAR4P25583 335 aa5.43□□□□□ -1.54
UBP8YMR223W EFT1P32324 842 aaKnown RBP5.43□□□□□ -1.54
UBP8YMR223W ABD1P32783 436 aaPredicted RBP5.43□□□□□ -1.54
UBP8YMR223W KTR4P38131 464 aa5.43□□□□□ -1.54
UBP8YMR223W NPP2P39997 493 aa5.42□□□□□ -1.54
UBP8YMR223W ESC2Q06340 456 aa5.42□□□□□ -1.54
UBP8YMR223W UPC2Q12151 913 aa5.42□□□□□ -1.54
UBP8YMR223W LAS17Q12446 633 aa5.42□□□□□ -1.54
UBP8YMR223W GUS1P46655 708 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
UBP8YMR223W SHE9Q04172 456 aa5.41□□□□□ -1.54
UBP8YMR223W YBR238CP38330 731 aaKnown RBP5.4□□□□□ -1.54
UBP8YMR223W MBP1P39678 833 aa5.4□□□□□ -1.54
UBP8YMR223W YER158CP40095 573 aa5.4□□□□□ -1.54
UBP8YMR223W SFB2P53953 876 aa5.4□□□□□ -1.54
UBP8YMR223W SVF1Q05515 481 aa5.4□□□□□ -1.54
UBP8YMR223W DUS3Q06053 668 aaKnown RBP5.4□□□□□ -1.54
UBP8YMR223W BUL1P48524 976 aa5.4□□□□□ -1.55
UBP8YMR223W RAI1P53063 387 aaKnown RBP5.4□□□□□ -1.55
UBP8YMR223W WHI4Q07655 649 aaKnown RBP5.4□□□□□ -1.55
UBP8YMR223W PIN2Q12057 282 aa5.4□□□□□ -1.55
UBP8YMR223W FAL1Q12099 399 aaKnown RBP5.4□□□□□ -1.55
UBP8YMR223W TRP4P07285 380 aaPredicted RBP5.39□□□□□ -1.55
UBP8YMR223W SED4P25365 1065 aa5.39□□□□□ -1.55
UBP8YMR223W UBA2P52488 636 aa5.39□□□□□ -1.55
UBP8YMR223W YOL073CQ08232 322 aa5.39□□□□□ -1.55
UBP8YMR223W CDC48P25694 835 aaKnown RBP5.38□□□□□ -1.55
UBP8YMR223W STE14P32584 239 aa5.38□□□□□ -1.55
UBP8YMR223W TSL1P38427 1098 aaKnown RBP5.38□□□□□ -1.55
UBP8YMR223W YKE2P52553 114 aa5.38□□□□□ -1.55
UBP8YMR223W YPR196WQ06595 470 aa5.38□□□□□ -1.55
UBP8YMR223W YLR040CQ07988 224 aa5.38□□□□□ -1.55
UBP8YMR223W SCT1P32784 759 aa5.37□□□□□ -1.55
UBP8YMR223W MAD1P40957 749 aa5.37□□□□□ -1.55
UBP8YMR223W VPS16Q03308 798 aa5.37□□□□□ -1.55
UBP8YMR223W CAD1P24813 409 aaKnown RBP5.36□□□□□ -1.55
UBP8YMR223W ERG4P25340 473 aa5.36□□□□□ -1.55
UBP8YMR223W VBA5P36172 582 aa5.36□□□□□ -1.55
UBP8YMR223W SUL1P38359 859 aa5.36□□□□□ -1.55
UBP8YMR223W CWC24P53769 259 aa5.36□□□□□ -1.55
UBP8YMR223W OPI10Q08202 246 aa5.36□□□□□ -1.55
UBP8YMR223W OMS1Q06668 471 aa5.35□□□□□ -1.55
UBP8YMR223W ADE8P04161 214 aa5.34□□□□□ -1.55
UBP8YMR223W NOT3P06102 836 aaKnown RBP5.34□□□□□ -1.55
UBP8YMR223W MRP8P35719 219 aa5.34□□□□□ -1.55
UBP8YMR223W SIT1P39980 628 aa5.34□□□□□ -1.55
UBP8YMR223W TPO2P53283 614 aa5.34□□□□□ -1.55
UBP8YMR223W VPS30Q02948 557 aa5.34□□□□□ -1.55
UBP8YMR223W YDR306CQ06640 478 aa5.34□□□□□ -1.55
UBP8YMR223W FBP1P09201 348 aa5.33□□□□□ -1.56
UBP8YMR223W PPH3P32345 308 aa5.33□□□□□ -1.56
UBP8YMR223W STE13P33894 931 aa5.33□□□□□ -1.56
UBP8YMR223W TIM44Q01852 431 aa5.33□□□□□ -1.56
UBP8YMR223W RNT1Q02555 471 aa5.33□□□□□ -1.56
UBP8YMR223W ACF2Q12168 779 aa5.33□□□□□ -1.56
UBP8YMR223W PBY1P38254 753 aa5.32□□□□□ -1.56
UBP8YMR223W STU2P46675 888 aa5.32□□□□□ -1.56
UBP8YMR223W MCH5Q08777 521 aa5.32□□□□□ -1.56
UBP8YMR223W YML122CQ03207 126 aa5.31□□□□□ -1.56
UBP8YMR223W NPP1P25353 742 aa5.31□□□□□ -1.56
UBP8YMR223W AAR2P32357 355 aaPredicted RBP5.31□□□□□ -1.56
UBP8YMR223W QRI1P43123 477 aaKnown RBP5.31□□□□□ -1.56
UBP8YMR223W ERG5P54781 538 aa5.31□□□□□ -1.56
UBP8YMR223W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
UBP8YMR223W SLU7Q02775 382 aaKnown RBP5.31□□□□□ -1.56
UBP8YMR223W TMN2Q04562 672 aa5.31□□□□□ -1.56
UBP8YMR223W PPR1P07272 904 aaPredicted RBP5.3□□□□□ -1.56
UBP8YMR223W AFR1P33304 620 aa5.3□□□□□ -1.56
UBP8YMR223W SDP1P40479 209 aa5.3□□□□□ -1.56
UBP8YMR223W IRR1P40541 1150 aa5.3□□□□□ -1.56
UBP8YMR223W CCM1P48237 864 aaPredicted RBP5.3□□□□□ -1.56
UBP8YMR223W STB4P50104 949 aa5.29□□□□□ -1.56
UBP8YMR223W PEX19Q07418 342 aa5.29□□□□□ -1.56
UBP8YMR223W ALG7P07286 448 aa5.28□□□□□ -1.56
UBP8YMR223W YKL069WP36088 180 aa5.28□□□□□ -1.56
UBP8YMR223W YRO2P38079 344 aa5.28□□□□□ -1.56
UBP8YMR223W SSL1Q04673 461 aaPredicted RBP5.28□□□□□ -1.56
UBP8YMR223W PRP9P19736 530 aaKnown RBP5.27□□□□□ -1.57
UBP8YMR223W SEC21P32074 935 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms