RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C FAA4P47912 694 aaKnown RBP3.69□□□□□ -1.82
VTI1YMR197C ABD1P32783 436 aaPredicted RBP3.68□□□□□ -1.82
VTI1YMR197C PIN4P34217 668 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
VTI1YMR197C NPP2P39997 493 aa3.68□□□□□ -1.82
VTI1YMR197C YGR053CP53234 283 aa3.68□□□□□ -1.82
VTI1YMR197C WHI4Q07655 649 aaKnown RBP3.68□□□□□ -1.82
VTI1YMR197C LAS17Q12446 633 aa3.68□□□□□ -1.82
VTI1YMR197C URM1P40554 99 aaPredicted RBP3.67□□□□□ -1.82
VTI1YMR197C NCS6P53088 359 aa3.67□□□□□ -1.82
VTI1YMR197C GDE1Q02979 1223 aa3.67□□□□□ -1.82
VTI1YMR197C PPM2Q08282 695 aa3.67□□□□□ -1.82
VTI1YMR197C KAR4P25583 335 aa3.66□□□□□ -1.82
VTI1YMR197C CDC12P32468 407 aaKnown RBP3.66□□□□□ -1.82
VTI1YMR197C ATG19P35193 415 aa3.66□□□□□ -1.82
VTI1YMR197C OAR1P35731 278 aa3.66□□□□□ -1.82
VTI1YMR197C MOH1P38191 138 aa3.66□□□□□ -1.82
VTI1YMR197C SFB2P53953 876 aa3.66□□□□□ -1.82
VTI1YMR197C ENB1Q08299 606 aa3.66□□□□□ -1.82
VTI1YMR197C CAD1P24813 409 aaKnown RBP3.65□□□□□ -1.83
VTI1YMR197C EFT1P32324 842 aaKnown RBP3.65□□□□□ -1.83
VTI1YMR197C YPT53P36019 220 aa3.65□□□□□ -1.83
VTI1YMR197C MBP1P39678 833 aa3.65□□□□□ -1.83
VTI1YMR197C BUL1P48524 976 aa3.65□□□□□ -1.83
VTI1YMR197C SRP1Q02821 542 aaKnown RBP3.65□□□□□ -1.83
VTI1YMR197C RPC82P32349 654 aa3.64□□□□□ -1.83
VTI1YMR197C DUS3Q06053 668 aaKnown RBP3.64□□□□□ -1.83
VTI1YMR197C YPR196WQ06595 470 aa3.64□□□□□ -1.83
VTI1YMR197C YLR040CQ07988 224 aa3.64□□□□□ -1.83
VTI1YMR197C FAL1Q12099 399 aaKnown RBP3.64□□□□□ -1.83
VTI1YMR197C AGP1P25376 633 aa3.63□□□□□ -1.83
VTI1YMR197C SBA1P28707 216 aaKnown RBP3.63□□□□□ -1.83
VTI1YMR197C YER158CP40095 573 aa3.63□□□□□ -1.83
VTI1YMR197C UBA2P52488 636 aa3.63□□□□□ -1.83
VTI1YMR197C GUP2Q08929 609 aa3.63□□□□□ -1.83
VTI1YMR197C UPC2Q12151 913 aa3.63□□□□□ -1.83
VTI1YMR197C SUL1P38359 859 aa3.62□□□□□ -1.83
VTI1YMR197C KRI1P42846 591 aaKnown RBP3.62□□□□□ -1.83
VTI1YMR197C GYP7P48365 746 aa3.62□□□□□ -1.83
VTI1YMR197C RAI1P53063 387 aaKnown RBP3.62□□□□□ -1.83
VTI1YMR197C YOL073CQ08232 322 aa3.62□□□□□ -1.83
VTI1YMR197C CLN2P20438 545 aa3.61□□□□□ -1.83
VTI1YMR197C TSL1P38427 1098 aaKnown RBP3.61□□□□□ -1.83
VTI1YMR197C CWC24P53769 259 aa3.61□□□□□ -1.83
VTI1YMR197C YML122CQ03207 126 aa3.61□□□□□ -1.83
VTI1YMR197C SED4P25365 1065 aa3.6□□□□□ -1.83
VTI1YMR197C PPH3P32345 308 aa3.6□□□□□ -1.83
VTI1YMR197C VBA5P36172 582 aa3.6□□□□□ -1.83
VTI1YMR197C MAD1P40957 749 aa3.6□□□□□ -1.83
VTI1YMR197C GUS1P46655 708 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
VTI1YMR197C YDR306CQ06640 478 aa3.6□□□□□ -1.83
VTI1YMR197C NOT3P06102 836 aaKnown RBP3.59□□□□□ -1.83
VTI1YMR197C PRI2P20457 528 aa3.59□□□□□ -1.83
VTI1YMR197C ERG4P25340 473 aa3.59□□□□□ -1.83
VTI1YMR197C CDC48P25694 835 aaKnown RBP3.59□□□□□ -1.83
VTI1YMR197C STE14P32584 239 aa3.59□□□□□ -1.83
VTI1YMR197C YKL069WP36088 180 aa3.59□□□□□ -1.83
VTI1YMR197C YKR078WP36158 585 aaKnown RBP3.59□□□□□ -1.83
VTI1YMR197C KTR4P38131 464 aa3.59□□□□□ -1.83
VTI1YMR197C YMR206WQ03695 313 aa3.59□□□□□ -1.83
VTI1YMR197C TRP4P07285 380 aaPredicted RBP3.58□□□□□ -1.84
VTI1YMR197C NPP1P25353 742 aa3.58□□□□□ -1.84
VTI1YMR197C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
VTI1YMR197C SLU7Q02775 382 aaKnown RBP3.58□□□□□ -1.84
VTI1YMR197C VPS16Q03308 798 aa3.58□□□□□ -1.84
VTI1YMR197C SHE9Q04172 456 aa3.58□□□□□ -1.84
VTI1YMR197C SSL1Q04673 461 aaPredicted RBP3.58□□□□□ -1.84
VTI1YMR197C OMS1Q06668 471 aa3.58□□□□□ -1.84
VTI1YMR197C OPI10Q08202 246 aa3.58□□□□□ -1.84
VTI1YMR197C MCH5Q08777 521 aa3.58□□□□□ -1.84
VTI1YMR197C PIN2Q12057 282 aa3.58□□□□□ -1.84
VTI1YMR197C RNT1Q02555 471 aa3.57□□□□□ -1.84
VTI1YMR197C TMN2Q04562 672 aa3.57□□□□□ -1.84
VTI1YMR197C TRM13Q12383 476 aa3.57□□□□□ -1.84
VTI1YMR197C NAP1P25293 417 aaKnown RBP3.56□□□□□ -1.84
VTI1YMR197C AAR2P32357 355 aaPredicted RBP3.56□□□□□ -1.84
VTI1YMR197C AFR1P33304 620 aa3.56□□□□□ -1.84
VTI1YMR197C STE13P33894 931 aa3.56□□□□□ -1.84
VTI1YMR197C YBR238CP38330 731 aaKnown RBP3.56□□□□□ -1.84
VTI1YMR197C STB4P50104 949 aa3.56□□□□□ -1.84
VTI1YMR197C YKE2P52553 114 aa3.56□□□□□ -1.84
VTI1YMR197C JIP5Q06214 492 aaPredicted RBP3.56□□□□□ -1.84
VTI1YMR197C ADE8P04161 214 aa3.55□□□□□ -1.84
VTI1YMR197C SEC21P32074 935 aaKnown RBP3.55□□□□□ -1.84
VTI1YMR197C RPD3P32561 433 aa3.55□□□□□ -1.84
VTI1YMR197C YRO2P38079 344 aa3.55□□□□□ -1.84
VTI1YMR197C TIM44Q01852 431 aa3.55□□□□□ -1.84
VTI1YMR197C MUK1Q02866 612 aa3.55□□□□□ -1.84
VTI1YMR197C VPS30Q02948 557 aa3.55□□□□□ -1.84
VTI1YMR197C PEX19Q07418 342 aa3.55□□□□□ -1.84
VTI1YMR197C ACF2Q12168 779 aa3.55□□□□□ -1.84
VTI1YMR197C PPR1P07272 904 aaPredicted RBP3.54□□□□□ -1.84
VTI1YMR197C ALG7P07286 448 aa3.54□□□□□ -1.84
VTI1YMR197C MRP8P35719 219 aa3.54□□□□□ -1.84
VTI1YMR197C ERT1P38140 529 aa3.54□□□□□ -1.84
VTI1YMR197C YIL108WP40483 696 aaKnown RBP3.54□□□□□ -1.84
VTI1YMR197C QRI1P43123 477 aaKnown RBP3.54□□□□□ -1.84
VTI1YMR197C STU2P46675 888 aa3.54□□□□□ -1.84
VTI1YMR197C ERG5P54781 538 aa3.54□□□□□ -1.84
VTI1YMR197C FBP1P09201 348 aa3.53□□□□□ -1.84
VTI1YMR197C PBY1P38254 753 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms