RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	PFK1	P16861	987 aa	Known RBP	2.63	□□□□□ -1.99
SPT21	YMR179W	CDC12	P32468	407 aa	Known RBP	2.63	□□□□□ -1.99
SPT21	YMR179W	SNF7	P39929	240 aa	Known RBP	2.63	□□□□□ -1.99
SPT21	YMR179W	BUL1	P48524	976 aa		2.63	□□□□□ -1.99
SPT21	YMR179W	NPC2	Q12408	173 aa		2.63	□□□□□ -1.99
SPT21	YMR179W	HRR25	P29295	494 aa	Known RBP	2.63	□□□□□ -1.99
SPT21	YMR179W	CCC2	P38995	1004 aa		2.63	□□□□□ -1.99
SPT21	YMR179W	SAH1	P39954	449 aa	Known RBP	2.63	□□□□□ -1.99
SPT21	YMR179W	SFB2	P53953	876 aa		2.63	□□□□□ -1.99
SPT21	YMR179W	GDE1	Q02979	1223 aa		2.63	□□□□□ -1.99
SPT21	YMR179W	WHI4	Q07655	649 aa	Known RBP	2.63	□□□□□ -1.99
SPT21	YMR179W	ENB1	Q08299	606 aa		2.63	□□□□□ -1.99
SPT21	YMR179W	AGP1	P25376	633 aa		2.62	□□□□□ -1.99
SPT21	YMR179W	SBA1	P28707	216 aa	Known RBP	2.62	□□□□□ -1.99
SPT21	YMR179W	ATG19	P35193	415 aa		2.62	□□□□□ -1.99
SPT21	YMR179W	MBP1	P39678	833 aa		2.62	□□□□□ -1.99
SPT21	YMR179W	PSP2	P50109	593 aa	Known RBP	2.62	□□□□□ -1.99
SPT21	YMR179W	KAR4	P25583	335 aa		2.62	□□□□□ -1.99
SPT21	YMR179W	RPC82	P32349	654 aa		2.62	□□□□□ -1.99
SPT21	YMR179W	AIM39	Q08223	395 aa		2.62	□□□□□ -1.99
SPT21	YMR179W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
SPT21	YMR179W	GYP7	P48365	746 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	GUP2	Q08929	609 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	UPC2	Q12151	913 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	YPT53	P36019	220 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	MOH1	P38191	138 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	TSL1	P38427	1098 aa	Known RBP	2.61	□□□□□ -1.99
SPT21	YMR179W	SRP1	Q02821	542 aa	Known RBP	2.61	□□□□□ -1.99
SPT21	YMR179W	VPS16	Q03308	798 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	PPM2	Q08282	695 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	PIN2	Q12057	282 aa		2.61	□□□□□ -1.99
SPT21	YMR179W	STE14	P32584	239 aa		2.6	□□□□□ -1.99
SPT21	YMR179W	OAR1	P35731	278 aa		2.6	□□□□□ -1.99
SPT21	YMR179W	VBA5	P36172	582 aa		2.6	□□□□□ -1.99
SPT21	YMR179W	YKE2	P52553	114 aa		2.6	□□□□□ -1.99
SPT21	YMR179W	SHE9	Q04172	456 aa		2.6	□□□□□ -1.99
SPT21	YMR179W	YLR040C	Q07988	224 aa		2.6	□□□□□ -1.99
SPT21	YMR179W	CLN2	P20438	545 aa		2.59	□□□□□ -1.99
SPT21	YMR179W	EFT1	P32324	842 aa	Known RBP	2.59	□□□□□ -1.99
SPT21	YMR179W	AFR1	P33304	620 aa		2.59	□□□□□ -1.99
SPT21	YMR179W	YKL069W	P36088	180 aa		2.59	□□□□□ -1.99
SPT21	YMR179W	YKR078W	P36158	585 aa	Known RBP	2.59	□□□□□ -1.99
SPT21	YMR179W	YBR238C	P38330	731 aa	Known RBP	2.59	□□□□□ -1.99
SPT21	YMR179W	SLU7	Q02775	382 aa	Known RBP	2.59	□□□□□ -1.99
SPT21	YMR179W	DUS3	Q06053	668 aa	Known RBP	2.59	□□□□□ -1.99
SPT21	YMR179W	FAL1	Q12099	399 aa	Known RBP	2.59	□□□□□ -1.99
SPT21	YMR179W	NPP1	P25353	742 aa		2.59	□□□□□ -1.99
SPT21	YMR179W	YER158C	P40095	573 aa		2.59	□□□□□ -1.99
SPT21	YMR179W	KRI1	P42846	591 aa	Known RBP	2.59	□□□□□ -1.99
SPT21	YMR179W	OPI10	Q08202	246 aa		2.59	□□□□□ -1.99
SPT21	YMR179W	RAI1	P53063	387 aa	Known RBP	2.58	□□□□□ -2
SPT21	YMR179W	YOL073C	Q08232	322 aa		2.58	□□□□□ -2
SPT21	YMR179W	TRP4	P07285	380 aa	Predicted RBP	2.58	□□□□□ -2
SPT21	YMR179W	FBP1	P09201	348 aa		2.58	□□□□□ -2
SPT21	YMR179W	ERG5	P54781	538 aa		2.58	□□□□□ -2
SPT21	YMR179W	CDC48	P25694	835 aa	Known RBP	2.57	□□□□□ -2
SPT21	YMR179W	KTR4	P38131	464 aa		2.57	□□□□□ -2
SPT21	YMR179W	NAP1	P25293	417 aa	Known RBP	2.57	□□□□□ -2
SPT21	YMR179W	ERG4	P25340	473 aa		2.57	□□□□□ -2
SPT21	YMR179W	SIT1	P39980	628 aa		2.57	□□□□□ -2
SPT21	YMR179W	MAD1	P40957	749 aa		2.57	□□□□□ -2
SPT21	YMR179W	BUL2	Q03758	920 aa	Known RBP	2.57	□□□□□ -2
SPT21	YMR179W	SSL1	Q04673	461 aa	Predicted RBP	2.57	□□□□□ -2
SPT21	YMR179W	SVF1	Q05515	481 aa		2.57	□□□□□ -2
SPT21	YMR179W	YPR196W	Q06595	470 aa		2.57	□□□□□ -2
SPT21	YMR179W	YDR306C	Q06640	478 aa		2.57	□□□□□ -2
SPT21	YMR179W	NOT3	P06102	836 aa	Known RBP	2.56	□□□□□ -2
SPT21	YMR179W	PRI2	P20457	528 aa		2.56	□□□□□ -2
SPT21	YMR179W	CAD1	P24813	409 aa	Known RBP	2.56	□□□□□ -2
SPT21	YMR179W	SED4	P25365	1065 aa		2.56	□□□□□ -2
SPT21	YMR179W	STE13	P33894	931 aa		2.56	□□□□□ -2
SPT21	YMR179W	SUL1	P38359	859 aa		2.56	□□□□□ -2
SPT21	YMR179W	CWC24	P53769	259 aa		2.56	□□□□□ -2
SPT21	YMR179W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
SPT21	YMR179W	TRM13	Q12383	476 aa		2.56	□□□□□ -2
SPT21	YMR179W	STE5	P32917	917 aa		2.56	□□□□□ -2
SPT21	YMR179W	SEC21	P32074	935 aa	Known RBP	2.55	□□□□□ -2
SPT21	YMR179W	MRP8	P35719	219 aa		2.55	□□□□□ -2
SPT21	YMR179W	PBY1	P38254	753 aa		2.55	□□□□□ -2
SPT21	YMR179W	TMN2	Q04562	672 aa		2.55	□□□□□ -2
SPT21	YMR179W	ADE8	P04161	214 aa		2.54	□□□□□ -2
SPT21	YMR179W	PPH3	P32345	308 aa		2.54	□□□□□ -2
SPT21	YMR179W	ERT1	P38140	529 aa		2.54	□□□□□ -2
SPT21	YMR179W	SDP1	P40479	209 aa		2.54	□□□□□ -2
SPT21	YMR179W	IRR1	P40541	1150 aa		2.54	□□□□□ -2
SPT21	YMR179W	UBA2	P52488	636 aa		2.54	□□□□□ -2
SPT21	YMR179W	JIP5	Q06214	492 aa	Predicted RBP	2.54	□□□□□ -2
SPT21	YMR179W	OMS1	Q06668	471 aa		2.54	□□□□□ -2
SPT21	YMR179W	RPD3	P32561	433 aa		2.54	□□□□□ -2
SPT21	YMR179W	HBS1	P32769	611 aa	Known RBP	2.54	□□□□□ -2
SPT21	YMR179W	SPF1	P39986	1215 aa	Known RBP	2.54	□□□□□ -2
SPT21	YMR179W	STB4	P50104	949 aa		2.54	□□□□□ -2
SPT21	YMR179W	RNT1	Q02555	471 aa		2.54	□□□□□ -2
SPT21	YMR179W	PPR1	P07272	904 aa	Predicted RBP	2.53	□□□□□ -2
SPT21	YMR179W	TUB3	P09734	445 aa	Known RBP	2.53	□□□□□ -2
SPT21	YMR179W	AAR2	P32357	355 aa	Predicted RBP	2.53	□□□□□ -2
SPT21	YMR179W	YRO2	P38079	344 aa		2.53	□□□□□ -2
SPT21	YMR179W	CTF8	P38877	133 aa		2.53	□□□□□ -2
SPT21	YMR179W	QRI1	P43123	477 aa	Known RBP	2.53	□□□□□ -2
SPT21	YMR179W	PFD1	P46988	109 aa		2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms