RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C GCV2P49095 1034 aa4.55□□□□□ -1.68
UBX4YMR067C SPE1P08432 466 aa4.54□□□□□ -1.68
UBX4YMR067C PMI40P29952 429 aaKnown RBP4.54□□□□□ -1.68
UBX4YMR067C DCG1P32460 244 aa4.54□□□□□ -1.68
UBX4YMR067C PBY1P38254 753 aa4.54□□□□□ -1.68
UBX4YMR067C CHA4P43634 648 aa4.54□□□□□ -1.68
UBX4YMR067C GYP7P48365 746 aa4.54□□□□□ -1.68
UBX4YMR067C TPO2P53283 614 aa4.54□□□□□ -1.68
UBX4YMR067C DUS3Q06053 668 aaKnown RBP4.54□□□□□ -1.68
UBX4YMR067C SRP101P32916 621 aa4.53□□□□□ -1.68
UBX4YMR067C YKL069WP36088 180 aa4.53□□□□□ -1.68
UBX4YMR067C PAM1P37304 830 aaKnown RBP4.53□□□□□ -1.68
UBX4YMR067C VAC8P39968 578 aa4.53□□□□□ -1.68
UBX4YMR067C NTO1Q12311 748 aa4.53□□□□□ -1.68
UBX4YMR067C PMA1P05030 918 aaKnown RBP4.52□□□□□ -1.69
UBX4YMR067C PRI2P20457 528 aa4.52□□□□□ -1.69
UBX4YMR067C YBR238CP38330 731 aaKnown RBP4.52□□□□□ -1.69
UBX4YMR067C PLB1P39105 664 aa4.52□□□□□ -1.69
UBX4YMR067C SIT1P39980 628 aa4.52□□□□□ -1.69
UBX4YMR067C NPP2P39997 493 aa4.52□□□□□ -1.69
UBX4YMR067C YER158CP40095 573 aa4.52□□□□□ -1.69
UBX4YMR067C IRR1P40541 1150 aa4.52□□□□□ -1.69
UBX4YMR067C URM1P40554 99 aaPredicted RBP4.52□□□□□ -1.69
UBX4YMR067C ALD6P54115 500 aaKnown RBP4.52□□□□□ -1.69
UBX4YMR067C PRP9P19736 530 aaKnown RBP4.51□□□□□ -1.69
UBX4YMR067C SPF1P39986 1215 aaKnown RBP4.51□□□□□ -1.69
UBX4YMR067C YDR306CQ06640 478 aa4.51□□□□□ -1.69
UBX4YMR067C PUS9Q12069 462 aa4.51□□□□□ -1.69
UBX4YMR067C PPH3P32345 308 aa4.5□□□□□ -1.69
UBX4YMR067C TSL1P38427 1098 aaKnown RBP4.5□□□□□ -1.69
UBX4YMR067C MSE1P48525 536 aa4.5□□□□□ -1.69
UBX4YMR067C YKE2P52553 114 aa4.5□□□□□ -1.69
UBX4YMR067C EXG2P52911 562 aa4.5□□□□□ -1.69
UBX4YMR067C SFB2P53953 876 aa4.5□□□□□ -1.69
UBX4YMR067C TDA5Q06417 326 aaKnown RBP4.5□□□□□ -1.69
UBX4YMR067C PNS1Q12412 539 aa4.5□□□□□ -1.69
UBX4YMR067C CDC48P25694 835 aaKnown RBP4.49□□□□□ -1.69
UBX4YMR067C RAI1P53063 387 aaKnown RBP4.49□□□□□ -1.69
UBX4YMR067C YPR196WQ06595 470 aa4.49□□□□□ -1.69
UBX4YMR067C ENB1Q08299 606 aa4.49□□□□□ -1.69
UBX4YMR067C KCS1Q12494 1050 aa4.49□□□□□ -1.69
UBX4YMR067C ADE8P04161 214 aa4.48□□□□□ -1.69
UBX4YMR067C AIM21P40563 679 aa4.48□□□□□ -1.69
UBX4YMR067C NCS6P53088 359 aa4.48□□□□□ -1.69
UBX4YMR067C GUP2Q08929 609 aa4.48□□□□□ -1.69
UBX4YMR067C SSF2Q12153 453 aaPredicted RBP4.48□□□□□ -1.69
UBX4YMR067C NPC2Q12408 173 aa4.48□□□□□ -1.69
UBX4YMR067C AAR2P32357 355 aaPredicted RBP4.47□□□□□ -1.69
UBX4YMR067C DEF1P35732 738 aaKnown RBP4.47□□□□□ -1.69
UBX4YMR067C CCM1P48237 864 aaPredicted RBP4.47□□□□□ -1.69
UBX4YMR067C PHO23P50947 330 aa4.47□□□□□ -1.69
UBX4YMR067C PFK1P16861 987 aaKnown RBP4.46□□□□□ -1.7
UBX4YMR067C STE5P32917 917 aa4.46□□□□□ -1.7
UBX4YMR067C AFR1P33304 620 aa4.46□□□□□ -1.7
UBX4YMR067C PFD1P46988 109 aa4.46□□□□□ -1.7
UBX4YMR067C WRS1Q12109 432 aaKnown RBP4.46□□□□□ -1.7
UBX4YMR067C NPP1P25353 742 aa4.45□□□□□ -1.7
UBX4YMR067C CDC11P32458 415 aa4.45□□□□□ -1.7
UBX4YMR067C HBS1P32769 611 aaKnown RBP4.45□□□□□ -1.7
UBX4YMR067C SUN4P53616 420 aa4.45□□□□□ -1.7
UBX4YMR067C NAN1Q02931 896 aaKnown RBP4.45□□□□□ -1.7
UBX4YMR067C VPS30Q02948 557 aa4.45□□□□□ -1.7
UBX4YMR067C BUL2Q03758 920 aaKnown RBP4.45□□□□□ -1.7
UBX4YMR067C LCD1Q04377 747 aa4.45□□□□□ -1.7
UBX4YMR067C NOT3P06102 836 aaKnown RBP4.44□□□□□ -1.7
UBX4YMR067C YRO2P38079 344 aa4.44□□□□□ -1.7
UBX4YMR067C YBR184WP38299 523 aa4.44□□□□□ -1.7
UBX4YMR067C CHS7P38843 316 aa4.44□□□□□ -1.7
UBX4YMR067C UTP8P53276 713 aaKnown RBP4.44□□□□□ -1.7
UBX4YMR067C SPO75Q07798 868 aa4.44□□□□□ -1.7
UBX4YMR067C UPC2Q12151 913 aa4.44□□□□□ -1.7
UBX4YMR067C SED4P25365 1065 aa4.43□□□□□ -1.7
UBX4YMR067C STE13P33894 931 aa4.43□□□□□ -1.7
UBX4YMR067C MSS4P38994 779 aa4.43□□□□□ -1.7
UBX4YMR067C ERP6P53198 216 aa4.43□□□□□ -1.7
UBX4YMR067C NOP7P53261 605 aaKnown RBP4.43□□□□□ -1.7
UBX4YMR067C FMP25Q08023 583 aa4.43□□□□□ -1.7
UBX4YMR067C AIM39Q08223 395 aa4.43□□□□□ -1.7
UBX4YMR067C GRX1P25373 110 aaKnown RBP4.42□□□□□ -1.7
UBX4YMR067C KAR4P25583 335 aa4.42□□□□□ -1.7
UBX4YMR067C HRR25P29295 494 aaKnown RBP4.42□□□□□ -1.7
UBX4YMR067C YJL049WP47048 450 aa4.42□□□□□ -1.7
UBX4YMR067C KIN4Q01919 800 aa4.42□□□□□ -1.7
UBX4YMR067C WHI4Q07655 649 aaKnown RBP4.42□□□□□ -1.7
UBX4YMR067C FBP1P09201 348 aa4.41□□□□□ -1.7
UBX4YMR067C STE14P32584 239 aa4.41□□□□□ -1.7
UBX4YMR067C REC104P33323 182 aa4.41□□□□□ -1.7
UBX4YMR067C TOK1P40310 691 aa4.41□□□□□ -1.7
UBX4YMR067C ALR2P43553 858 aa4.41□□□□□ -1.7
UBX4YMR067C CTF4Q01454 927 aa4.41□□□□□ -1.7
UBX4YMR067C RFA1P22336 621 aaKnown RBP4.4□□□□□ -1.71
UBX4YMR067C RPL8BP29453 256 aaKnown RBP4.4□□□□□ -1.71
UBX4YMR067C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
UBX4YMR067C SLI1P53304 468 aa4.4□□□□□ -1.71
UBX4YMR067C LAS17Q12446 633 aa4.4□□□□□ -1.71
UBX4YMR067C OSH2Q12451 1283 aa4.4□□□□□ -1.71
UBX4YMR067C URA1P28272 314 aaPredicted RBP4.39□□□□□ -1.71
UBX4YMR067C EFT1P32324 842 aaKnown RBP4.39□□□□□ -1.71
UBX4YMR067C TYE7P33122 291 aaPredicted RBP4.39□□□□□ -1.71
UBX4YMR067C PET10P36139 283 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms