RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C EST2Q06163 884 aa5.97□□□□□ -1.45
CCS1YMR038C AVO1Q08236 1176 aa5.97□□□□□ -1.45
CCS1YMR038C RTT10Q08924 1013 aa5.97□□□□□ -1.45
CCS1YMR038C YAR028WP39548 234 aa5.96□□□□□ -1.46
CCS1YMR038C YVH1Q02256 364 aaKnown RBP5.96□□□□□ -1.46
CCS1YMR038C VPS16Q03308 798 aa5.96□□□□□ -1.46
CCS1YMR038C RGA2Q06407 1009 aa5.96□□□□□ -1.46
CCS1YMR038C PIN2Q12057 282 aa5.96□□□□□ -1.46
CCS1YMR038C GLT1Q12680 2145 aaKnown RBP5.96□□□□□ -1.46
CCS1YMR038C GSC2P40989 1895 aa5.96□□□□□ -1.46
CCS1YMR038C DED1P06634 604 aaKnown RBP5.95□□□□□ -1.46
CCS1YMR038C LSB3P43603 459 aaKnown RBP5.95□□□□□ -1.46
CCS1YMR038C RRP46P53256 223 aaPredicted RBP5.95□□□□□ -1.46
CCS1YMR038C YNR063WP53749 607 aa5.95□□□□□ -1.46
CCS1YMR038C UBP16Q02863 499 aa5.95□□□□□ -1.46
CCS1YMR038C RKM2Q03942 479 aa5.95□□□□□ -1.46
CCS1YMR038C MAG2Q06436 670 aaKnown RBP5.95□□□□□ -1.46
CCS1YMR038C GIC2Q06648 383 aa5.95□□□□□ -1.46
CCS1YMR038C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
CCS1YMR038C RRG1Q12167 365 aaPredicted RBP5.95□□□□□ -1.46
CCS1YMR038C FIG2P25653 1609 aa5.95□□□□□ -1.46
CCS1YMR038C MOT2P34909 587 aaKnown RBP5.94□□□□□ -1.46
CCS1YMR038C MTC5Q03897 1148 aa5.94□□□□□ -1.46
CCS1YMR038C RBA50Q04418 439 aa5.94□□□□□ -1.46
CCS1YMR038C SGD1Q06132 899 aa5.94□□□□□ -1.46
CCS1YMR038C HKR1P41809 1802 aa5.94□□□□□ -1.46
CCS1YMR038C CBP1P07252 654 aa5.93□□□□□ -1.46
CCS1YMR038C MKK2P32491 506 aa5.93□□□□□ -1.46
CCS1YMR038C SMY2P32909 740 aaKnown RBP5.93□□□□□ -1.46
CCS1YMR038C SAF1P38352 637 aa5.93□□□□□ -1.46
CCS1YMR038C MAD1P40957 749 aa5.93□□□□□ -1.46
CCS1YMR038C ENT3P47160 408 aa5.93□□□□□ -1.46
CCS1YMR038C ZDS2P54786 942 aa5.93□□□□□ -1.46
CCS1YMR038C EEB1Q02891 456 aa5.93□□□□□ -1.46
CCS1YMR038C YLR122CQ12312 125 aa5.93□□□□□ -1.46
CCS1YMR038C RER2P35196 286 aa5.92□□□□□ -1.46
CCS1YMR038C STV1P37296 890 aa5.92□□□□□ -1.46
CCS1YMR038C FAA4P47912 694 aaKnown RBP5.92□□□□□ -1.46
CCS1YMR038C ALT1P52893 592 aa5.92□□□□□ -1.46
CCS1YMR038C EAR1Q03212 550 aa5.92□□□□□ -1.46
CCS1YMR038C VPS64Q03944 604 aa5.92□□□□□ -1.46
CCS1YMR038C RSA3Q05942 220 aaKnown RBP5.92□□□□□ -1.46
CCS1YMR038C YPR117WQ06116 2489 aa5.92□□□□□ -1.46
CCS1YMR038C RPS4AP0CX35 261 aaKnown RBP5.91□□□□□ -1.46
CCS1YMR038C RPS4BP0CX36 261 aaKnown RBP5.91□□□□□ -1.46
CCS1YMR038C CLN2P20438 545 aa5.91□□□□□ -1.46
CCS1YMR038C NFS1P25374 497 aa5.91□□□□□ -1.46
CCS1YMR038C COQ2P32378 372 aa5.91□□□□□ -1.46
CCS1YMR038C PAH1P32567 862 aa5.91□□□□□ -1.46
CCS1YMR038C NNK1P36003 928 aa5.91□□□□□ -1.46
CCS1YMR038C ATG14P38270 344 aa5.91□□□□□ -1.46
CCS1YMR038C YGR053CP53234 283 aa5.91□□□□□ -1.46
CCS1YMR038C NSE3Q05541 303 aa5.91□□□□□ -1.46
CCS1YMR038C YLR257WQ06146 321 aaKnown RBP5.91□□□□□ -1.46
CCS1YMR038C LAP2Q10740 671 aa5.91□□□□□ -1.46
CCS1YMR038C TMA46Q12000 345 aaKnown RBP5.91□□□□□ -1.46
CCS1YMR038C RAD27P26793 382 aa5.9□□□□□ -1.46
CCS1YMR038C ALG3P38179 458 aa5.9□□□□□ -1.46
CCS1YMR038C QNS1P38795 714 aaKnown RBP5.9□□□□□ -1.46
CCS1YMR038C GSM1P42950 618 aa5.9□□□□□ -1.46
CCS1YMR038C YNL050CP53952 270 aa5.9□□□□□ -1.46
CCS1YMR038C ALD6P54115 500 aaKnown RBP5.9□□□□□ -1.46
CCS1YMR038C SYP1P25623 870 aaKnown RBP5.89□□□□□ -1.47
CCS1YMR038C WHI3P34761 661 aaKnown RBP5.89□□□□□ -1.47
CCS1YMR038C HSE1P38753 452 aa5.89□□□□□ -1.47
CCS1YMR038C NMD3P38861 518 aaKnown RBP5.89□□□□□ -1.47
CCS1YMR038C GDE1Q02979 1223 aa5.89□□□□□ -1.47
CCS1YMR038C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
CCS1YMR038C PTC5Q12511 572 aa5.89□□□□□ -1.47
CCS1YMR038C TAO3P40468 2376 aa5.89□□□□□ -1.47
CCS1YMR038C COQ4O13525 335 aa5.88□□□□□ -1.47
CCS1YMR038C TRP2P00899 507 aaKnown RBP5.88□□□□□ -1.47
CCS1YMR038C KAE1P36132 386 aa5.88□□□□□ -1.47
CCS1YMR038C VAC8P39968 578 aa5.88□□□□□ -1.47
CCS1YMR038C MMM1P41800 426 aa5.88□□□□□ -1.47
CCS1YMR038C VPS53P47061 822 aa5.88□□□□□ -1.47
CCS1YMR038C FCP1Q03254 732 aa5.88□□□□□ -1.47
CCS1YMR038C PKH1Q03407 766 aa5.88□□□□□ -1.47
CCS1YMR038C UBX2Q04228 584 aa5.88□□□□□ -1.47
CCS1YMR038C PUS7Q08647 676 aaKnown RBP5.88□□□□□ -1.47
CCS1YMR038C SSK22P25390 1331 aaPredicted RBP5.88□□□□□ -1.47
CCS1YMR038C CHS2P14180 963 aa5.87□□□□□ -1.47
CCS1YMR038C DBP5P20449 482 aaKnown RBP5.87□□□□□ -1.47
CCS1YMR038C LYP1P32487 611 aa5.87□□□□□ -1.47
CCS1YMR038C RTR1P40084 226 aaPredicted RBP5.87□□□□□ -1.47
CCS1YMR038C CWC24P53769 259 aa5.87□□□□□ -1.47
CCS1YMR038C TIF35Q04067 274 aaKnown RBP5.87□□□□□ -1.47
CCS1YMR038C YLR225CQ05948 407 aaKnown RBP5.87□□□□□ -1.47
CCS1YMR038C KRE2P27809 442 aa5.86□□□□□ -1.47
CCS1YMR038C KIP1P28742 1111 aa5.86□□□□□ -1.47
CCS1YMR038C PSF2P40359 213 aa5.86□□□□□ -1.47
CCS1YMR038C CNN1P43618 361 aa5.86□□□□□ -1.47
CCS1YMR038C CIT3P43635 486 aa5.86□□□□□ -1.47
CCS1YMR038C YJL045WP47052 634 aa5.86□□□□□ -1.47
CCS1YMR038C ZDS1P50111 915 aaKnown RBP5.86□□□□□ -1.47
CCS1YMR038C YGR130CP53278 816 aa5.86□□□□□ -1.47
CCS1YMR038C TPP1Q03796 238 aa5.86□□□□□ -1.47
CCS1YMR038C BMS1Q08965 1183 aaKnown RBP5.86□□□□□ -1.47
CCS1YMR038C YVC1Q12324 675 aa5.86□□□□□ -1.47
CCS1YMR038C LYS2P07702 1392 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms