RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	AIM39	Q08223	395 aa		4.95	□□□□□ -1.62
RPN13	YLR421C	NPC2	Q12408	173 aa		4.95	□□□□□ -1.62
RPN13	YLR421C	RAD53	P22216	821 aa		4.94	□□□□□ -1.62
RPN13	YLR421C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RPN13	YLR421C	MBP1	P39678	833 aa		4.94	□□□□□ -1.62
RPN13	YLR421C	PSP2	P50109	593 aa	Known RBP	4.94	□□□□□ -1.62
RPN13	YLR421C	SFB2	P53953	876 aa		4.94	□□□□□ -1.62
RPN13	YLR421C	GDE1	Q02979	1223 aa		4.94	□□□□□ -1.62
RPN13	YLR421C	SNF7	P39929	240 aa	Known RBP	4.93	□□□□□ -1.62
RPN13	YLR421C	NCS6	P53088	359 aa		4.92	□□□□□ -1.62
RPN13	YLR421C	LAS17	Q12446	633 aa		4.92	□□□□□ -1.62
RPN13	YLR421C	FAL1	Q12099	399 aa	Known RBP	4.91	□□□□□ -1.62
RPN13	YLR421C	CAD1	P24813	409 aa	Known RBP	4.9	□□□□□ -1.63
RPN13	YLR421C	KAR4	P25583	335 aa		4.9	□□□□□ -1.63
RPN13	YLR421C	CDC12	P32468	407 aa	Known RBP	4.9	□□□□□ -1.63
RPN13	YLR421C	URM1	P40554	99 aa	Predicted RBP	4.9	□□□□□ -1.63
RPN13	YLR421C	SRP1	Q02821	542 aa	Known RBP	4.9	□□□□□ -1.63
RPN13	YLR421C	DUS3	Q06053	668 aa	Known RBP	4.9	□□□□□ -1.63
RPN13	YLR421C	PPM2	Q08282	695 aa		4.9	□□□□□ -1.63
RPN13	YLR421C	YPR196W	Q06595	470 aa		4.89	□□□□□ -1.63
RPN13	YLR421C	ENB1	Q08299	606 aa		4.89	□□□□□ -1.63
RPN13	YLR421C	ATG19	P35193	415 aa		4.88	□□□□□ -1.63
RPN13	YLR421C	OAR1	P35731	278 aa		4.88	□□□□□ -1.63
RPN13	YLR421C	MOH1	P38191	138 aa		4.88	□□□□□ -1.63
RPN13	YLR421C	CWC24	P53769	259 aa		4.88	□□□□□ -1.63
RPN13	YLR421C	AGP1	P25376	633 aa		4.87	□□□□□ -1.63
RPN13	YLR421C	SBA1	P28707	216 aa	Known RBP	4.87	□□□□□ -1.63
RPN13	YLR421C	EFT1	P32324	842 aa	Known RBP	4.87	□□□□□ -1.63
RPN13	YLR421C	BUL1	P48524	976 aa		4.87	□□□□□ -1.63
RPN13	YLR421C	YLR040C	Q07988	224 aa		4.87	□□□□□ -1.63
RPN13	YLR421C	YPT53	P36019	220 aa		4.86	□□□□□ -1.63
RPN13	YLR421C	VBA5	P36172	582 aa		4.86	□□□□□ -1.63
RPN13	YLR421C	SUL1	P38359	859 aa		4.86	□□□□□ -1.63
RPN13	YLR421C	YER158C	P40095	573 aa		4.86	□□□□□ -1.63
RPN13	YLR421C	KRI1	P42846	591 aa	Known RBP	4.86	□□□□□ -1.63
RPN13	YLR421C	GYP7	P48365	746 aa		4.86	□□□□□ -1.63
RPN13	YLR421C	UBA2	P52488	636 aa		4.86	□□□□□ -1.63
RPN13	YLR421C	UPC2	Q12151	913 aa		4.86	□□□□□ -1.63
RPN13	YLR421C	PRI2	P20457	528 aa		4.85	□□□□□ -1.63
RPN13	YLR421C	MAD1	P40957	749 aa		4.85	□□□□□ -1.63
RPN13	YLR421C	RAI1	P53063	387 aa	Known RBP	4.85	□□□□□ -1.63
RPN13	YLR421C	YDR306C	Q06640	478 aa		4.85	□□□□□ -1.63
RPN13	YLR421C	CLN2	P20438	545 aa		4.84	□□□□□ -1.63
RPN13	YLR421C	SED4	P25365	1065 aa		4.84	□□□□□ -1.63
RPN13	YLR421C	RPC82	P32349	654 aa		4.84	□□□□□ -1.63
RPN13	YLR421C	YKL069W	P36088	180 aa		4.84	□□□□□ -1.63
RPN13	YLR421C	YOL073C	Q08232	322 aa		4.84	□□□□□ -1.63
RPN13	YLR421C	GUP2	Q08929	609 aa		4.84	□□□□□ -1.63
RPN13	YLR421C	NPP1	P25353	742 aa		4.83	□□□□□ -1.64
RPN13	YLR421C	PPH3	P32345	308 aa		4.83	□□□□□ -1.64
RPN13	YLR421C	TSL1	P38427	1098 aa	Known RBP	4.83	□□□□□ -1.64
RPN13	YLR421C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RPN13	YLR421C	VPS16	Q03308	798 aa		4.83	□□□□□ -1.64
RPN13	YLR421C	PIN2	Q12057	282 aa		4.83	□□□□□ -1.64
RPN13	YLR421C	NOT3	P06102	836 aa	Known RBP	4.82	□□□□□ -1.64
RPN13	YLR421C	ERG4	P25340	473 aa		4.82	□□□□□ -1.64
RPN13	YLR421C	STE14	P32584	239 aa		4.82	□□□□□ -1.64
RPN13	YLR421C	YMR206W	Q03695	313 aa		4.82	□□□□□ -1.64
RPN13	YLR421C	JIP5	Q06214	492 aa	Predicted RBP	4.82	□□□□□ -1.64
RPN13	YLR421C	OPI10	Q08202	246 aa		4.82	□□□□□ -1.64
RPN13	YLR421C	CDC48	P25694	835 aa	Known RBP	4.81	□□□□□ -1.64
RPN13	YLR421C	YKR078W	P36158	585 aa	Known RBP	4.81	□□□□□ -1.64
RPN13	YLR421C	YML122C	Q03207	126 aa		4.81	□□□□□ -1.64
RPN13	YLR421C	SSL1	Q04673	461 aa	Predicted RBP	4.81	□□□□□ -1.64
RPN13	YLR421C	KTR4	P38131	464 aa		4.8	□□□□□ -1.64
RPN13	YLR421C	SLU7	Q02775	382 aa	Known RBP	4.8	□□□□□ -1.64
RPN13	YLR421C	SHE9	Q04172	456 aa		4.8	□□□□□ -1.64
RPN13	YLR421C	TRM13	Q12383	476 aa		4.8	□□□□□ -1.64
RPN13	YLR421C	AAR2	P32357	355 aa	Predicted RBP	4.79	□□□□□ -1.64
RPN13	YLR421C	AFR1	P33304	620 aa		4.79	□□□□□ -1.64
RPN13	YLR421C	YKE2	P52553	114 aa		4.79	□□□□□ -1.64
RPN13	YLR421C	ORC1	P54784	914 aa	Predicted RBP	4.79	□□□□□ -1.64
RPN13	YLR421C	TRP4	P07285	380 aa	Predicted RBP	4.78	□□□□□ -1.64
RPN13	YLR421C	RPD3	P32561	433 aa		4.78	□□□□□ -1.64
RPN13	YLR421C	STE13	P33894	931 aa		4.78	□□□□□ -1.64
RPN13	YLR421C	YRO2	P38079	344 aa		4.78	□□□□□ -1.64
RPN13	YLR421C	STB4	P50104	949 aa		4.78	□□□□□ -1.64
RPN13	YLR421C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RPN13	YLR421C	ADE8	P04161	214 aa		4.77	□□□□□ -1.65
RPN13	YLR421C	ERT1	P38140	529 aa		4.77	□□□□□ -1.65
RPN13	YLR421C	YBR238C	P38330	731 aa	Known RBP	4.77	□□□□□ -1.65
RPN13	YLR421C	TMN2	Q04562	672 aa		4.77	□□□□□ -1.65
RPN13	YLR421C	MCH5	Q08777	521 aa		4.77	□□□□□ -1.65
RPN13	YLR421C	NAP1	P25293	417 aa	Known RBP	4.76	□□□□□ -1.65
RPN13	YLR421C	SEC21	P32074	935 aa	Known RBP	4.76	□□□□□ -1.65
RPN13	YLR421C	MRP8	P35719	219 aa		4.76	□□□□□ -1.65
RPN13	YLR421C	RNT1	Q02555	471 aa		4.76	□□□□□ -1.65
RPN13	YLR421C	MUK1	Q02866	612 aa		4.76	□□□□□ -1.65
RPN13	YLR421C	OMS1	Q06668	471 aa		4.76	□□□□□ -1.65
RPN13	YLR421C	YIL108W	P40483	696 aa	Known RBP	4.75	□□□□□ -1.65
RPN13	YLR421C	ERG5	P54781	538 aa		4.75	□□□□□ -1.65
RPN13	YLR421C	VPS30	Q02948	557 aa		4.75	□□□□□ -1.65
RPN13	YLR421C	PEX19	Q07418	342 aa		4.75	□□□□□ -1.65
RPN13	YLR421C	ALG7	P07286	448 aa		4.74	□□□□□ -1.65
RPN13	YLR421C	RFA1	P22336	621 aa	Known RBP	4.74	□□□□□ -1.65
RPN13	YLR421C	PBY1	P38254	753 aa		4.74	□□□□□ -1.65
RPN13	YLR421C	VAC8	P39968	578 aa		4.74	□□□□□ -1.65
RPN13	YLR421C	ACF2	Q12168	779 aa		4.74	□□□□□ -1.65
RPN13	YLR421C	AIM44	Q99299	758 aa		4.74	□□□□□ -1.65
RPN13	YLR421C	PPR1	P07272	904 aa	Predicted RBP	4.73	□□□□□ -1.65

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