RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C YPT53P36019 220 aa5.16□□□□□ -1.58
NYV1YLR093C CCC2P38995 1004 aa5.16□□□□□ -1.58
NYV1YLR093C YLR225CQ05948 407 aaKnown RBP5.16□□□□□ -1.58
NYV1YLR093C AIM39Q08223 395 aa5.16□□□□□ -1.58
NYV1YLR093C NPC2Q12408 173 aa5.16□□□□□ -1.58
NYV1YLR093C OAR1P35731 278 aa5.15□□□□□ -1.59
NYV1YLR093C KRI1P42846 591 aaKnown RBP5.15□□□□□ -1.59
NYV1YLR093C NCS6P53088 359 aa5.15□□□□□ -1.59
NYV1YLR093C GUP2Q08929 609 aa5.15□□□□□ -1.59
NYV1YLR093C CDC12P32468 407 aaKnown RBP5.13□□□□□ -1.59
NYV1YLR093C NPP2P39997 493 aa5.13□□□□□ -1.59
NYV1YLR093C LAS17Q12446 633 aa5.13□□□□□ -1.59
NYV1YLR093C MOH1P38191 138 aa5.12□□□□□ -1.59
NYV1YLR093C SAH1P39954 449 aaKnown RBP5.12□□□□□ -1.59
NYV1YLR093C BUL1P48524 976 aa5.12□□□□□ -1.59
NYV1YLR093C SRP1Q02821 542 aaKnown RBP5.12□□□□□ -1.59
NYV1YLR093C PPM2Q08282 695 aa5.12□□□□□ -1.59
NYV1YLR093C SBA1P28707 216 aaKnown RBP5.11□□□□□ -1.59
NYV1YLR093C FAA4P47912 694 aaKnown RBP5.11□□□□□ -1.59
NYV1YLR093C ESC2Q06340 456 aa5.11□□□□□ -1.59
NYV1YLR093C AGP1P25376 633 aa5.1□□□□□ -1.59
NYV1YLR093C KAR4P25583 335 aa5.1□□□□□ -1.59
NYV1YLR093C EFT1P32324 842 aaKnown RBP5.1□□□□□ -1.59
NYV1YLR093C YKR078WP36158 585 aaKnown RBP5.1□□□□□ -1.59
NYV1YLR093C ABD1P32783 436 aaPredicted RBP5.09□□□□□ -1.59
NYV1YLR093C GYP7P48365 746 aa5.09□□□□□ -1.59
NYV1YLR093C UPC2Q12151 913 aa5.09□□□□□ -1.59
NYV1YLR093C KTR4P38131 464 aa5.08□□□□□ -1.6
NYV1YLR093C YBR238CP38330 731 aaKnown RBP5.08□□□□□ -1.6
NYV1YLR093C GUS1P46655 708 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
NYV1YLR093C SFB2P53953 876 aa5.08□□□□□ -1.6
NYV1YLR093C WHI4Q07655 649 aaKnown RBP5.08□□□□□ -1.6
NYV1YLR093C CLN2P20438 545 aa5.07□□□□□ -1.6
NYV1YLR093C NAP1P25293 417 aaKnown RBP5.07□□□□□ -1.6
NYV1YLR093C GDE1Q02979 1223 aa5.07□□□□□ -1.6
NYV1YLR093C STE14P32584 239 aa5.06□□□□□ -1.6
NYV1YLR093C MBP1P39678 833 aa5.06□□□□□ -1.6
NYV1YLR093C YER158CP40095 573 aa5.06□□□□□ -1.6
NYV1YLR093C SHE9Q04172 456 aa5.06□□□□□ -1.6
NYV1YLR093C DUS3Q06053 668 aaKnown RBP5.06□□□□□ -1.6
NYV1YLR093C YLR040CQ07988 224 aa5.06□□□□□ -1.6
NYV1YLR093C TRP4P07285 380 aaPredicted RBP5.05□□□□□ -1.6
NYV1YLR093C TSL1P38427 1098 aaKnown RBP5.05□□□□□ -1.6
NYV1YLR093C UBA2P52488 636 aa5.05□□□□□ -1.6
NYV1YLR093C YKE2P52553 114 aa5.05□□□□□ -1.6
NYV1YLR093C RAI1P53063 387 aaKnown RBP5.05□□□□□ -1.6
NYV1YLR093C YOL073CQ08232 322 aa5.05□□□□□ -1.6
NYV1YLR093C OMS1Q06668 471 aa5.04□□□□□ -1.6
NYV1YLR093C PIN2Q12057 282 aa5.04□□□□□ -1.6
NYV1YLR093C FAL1Q12099 399 aaKnown RBP5.04□□□□□ -1.6
NYV1YLR093C SED4P25365 1065 aa5.03□□□□□ -1.6
NYV1YLR093C CDC48P25694 835 aaKnown RBP5.03□□□□□ -1.6
NYV1YLR093C ERG4P25340 473 aa5.02□□□□□ -1.61
NYV1YLR093C VBA5P36172 582 aa5.02□□□□□ -1.61
NYV1YLR093C SUL1P38359 859 aa5.02□□□□□ -1.61
NYV1YLR093C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61 RIP-Chip
NYV1YLR093C VPS16Q03308 798 aa5.02□□□□□ -1.61
NYV1YLR093C SVF1Q05515 481 aa5.02□□□□□ -1.61
NYV1YLR093C YPR196WQ06595 470 aa5.02□□□□□ -1.61
NYV1YLR093C FBP1P09201 348 aa5.01□□□□□ -1.61
NYV1YLR093C CAD1P24813 409 aaKnown RBP5.01□□□□□ -1.61
NYV1YLR093C SLU7Q02775 382 aaKnown RBP5.01□□□□□ -1.61
NYV1YLR093C QRI1P43123 477 aaKnown RBP5□□□□□ -1.61
NYV1YLR093C ERG5P54781 538 aa5□□□□□ -1.61
NYV1YLR093C RNT1Q02555 471 aa5□□□□□ -1.61
NYV1YLR093C YML122CQ03207 126 aa5□□□□□ -1.61
NYV1YLR093C MCH5Q08777 521 aa5□□□□□ -1.61
NYV1YLR093C NOT3P06102 836 aaKnown RBP4.99□□□□□ -1.61
NYV1YLR093C NPP1P25353 742 aa4.99□□□□□ -1.61
NYV1YLR093C AFR1P33304 620 aa4.99□□□□□ -1.61
NYV1YLR093C STE13P33894 931 aa4.99□□□□□ -1.61
NYV1YLR093C MRP8P35719 219 aa4.99□□□□□ -1.61
NYV1YLR093C SIT1P39980 628 aa4.99□□□□□ -1.61
NYV1YLR093C TMN2Q04562 672 aa4.99□□□□□ -1.61
NYV1YLR093C OPI10Q08202 246 aa4.99□□□□□ -1.61
NYV1YLR093C MAD1P40957 749 aa4.98□□□□□ -1.61
NYV1YLR093C STU2P46675 888 aa4.98□□□□□ -1.61
NYV1YLR093C YDR306CQ06640 478 aa4.98□□□□□ -1.61
NYV1YLR093C ACF2Q12168 779 aa4.98□□□□□ -1.61
NYV1YLR093C ADE8P04161 214 aa4.97□□□□□ -1.61
NYV1YLR093C PPR1P07272 904 aaPredicted RBP4.97□□□□□ -1.61
NYV1YLR093C PPH3P32345 308 aa4.97□□□□□ -1.61
NYV1YLR093C CWC24P53769 259 aa4.97□□□□□ -1.61
NYV1YLR093C TIM44Q01852 431 aa4.97□□□□□ -1.61
NYV1YLR093C SEC21P32074 935 aaKnown RBP4.96□□□□□ -1.62
NYV1YLR093C YKL069WP36088 180 aa4.96□□□□□ -1.62
NYV1YLR093C PBY1P38254 753 aa4.96□□□□□ -1.62
NYV1YLR093C SDP1P40479 209 aa4.96□□□□□ -1.62
NYV1YLR093C STB4P50104 949 aa4.96□□□□□ -1.62
NYV1YLR093C VPS30Q02948 557 aa4.96□□□□□ -1.62
NYV1YLR093C SCT1P32784 759 aa4.95□□□□□ -1.62
NYV1YLR093C CTF8P38877 133 aa4.95□□□□□ -1.62
NYV1YLR093C TPO2P53283 614 aa4.95□□□□□ -1.62
NYV1YLR093C BUL2Q03758 920 aaKnown RBP4.95□□□□□ -1.62
NYV1YLR093C SSL1Q04673 461 aaPredicted RBP4.95□□□□□ -1.62
NYV1YLR093C IRC10Q08118 586 aa4.95□□□□□ -1.62
NYV1YLR093C ALG7P07286 448 aa4.94□□□□□ -1.62
NYV1YLR093C AAR2P32357 355 aaPredicted RBP4.94□□□□□ -1.62
NYV1YLR093C CCM1P48237 864 aaPredicted RBP4.94□□□□□ -1.62
NYV1YLR093C PEX19Q07418 342 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms