RNA–Protein interactions for RNA: YKL021C

MAK11, Transcript of Protein involved in an early step of 60S ribosomal subunit biogenesis, yeast

Gene MAK11, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MAK11	YKL021C	YBR284W	P38150	797 aa		5.76	□□□□□ -1.49
MAK11	YKL021C	ZRG8	P40021	1076 aa		5.76	□□□□□ -1.49
MAK11	YKL021C	GCV2	P49095	1034 aa		5.76	□□□□□ -1.49
MAK11	YKL021C	SPT20	P50875	604 aa		5.76	□□□□□ -1.49
MAK11	YKL021C	OSH2	Q12451	1283 aa		5.76	□□□□□ -1.49
MAK11	YKL021C	YOL098C	Q12496	1037 aa		5.76	□□□□□ -1.49
MAK11	YKL021C	CIT1	P00890	479 aa		5.75	□□□□□ -1.49
MAK11	YKL021C	ARE1	P25628	610 aa		5.75	□□□□□ -1.49
MAK11	YKL021C	YKR078W	P36158	585 aa	Known RBP	5.75	□□□□□ -1.49
MAK11	YKL021C	YBR238C	P38330	731 aa	Known RBP	5.75	□□□□□ -1.49
MAK11	YKL021C	TPO2	P53283	614 aa		5.75	□□□□□ -1.49
MAK11	YKL021C	GPB1	Q08886	897 aa		5.75	□□□□□ -1.49
MAK11	YKL021C	FLC1	Q08967	793 aa		5.75	□□□□□ -1.49
MAK11	YKL021C	HMI1	Q12039	706 aa		5.75	□□□□□ -1.49
MAK11	YKL021C	HBN1	Q96VH4	193 aa		5.75	□□□□□ -1.49
MAK11	YKL021C	TOP3	P13099	656 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	HSP60	P19882	572 aa	Known RBP	5.74	□□□□□ -1.49
MAK11	YKL021C	TOK1	P40310	691 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	YKE2	P52553	114 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	YGR012W	P53206	393 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	YGR125W	P53273	1036 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	VPS62	P53285	467 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
MAK11	YKL021C	TAF8	Q03750	510 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	ADY3	Q07732	790 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	TPO1	Q07824	586 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	ADE8	P04161	214 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	ENA1	P13587	1091 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	MSD1	P15179	658 aa	Known RBP	5.74	□□□□□ -1.49
MAK11	YKL021C	EMC1	P25574	760 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	CDC20	P26309	610 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	FLR1	P38124	548 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	ENA2	Q01896	1091 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	YAP6	Q03935	383 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	CDC53	Q12018	815 aa	Known RBP	5.74	□□□□□ -1.49
MAK11	YKL021C	YPR071W	Q12346	211 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	ENA5	Q12691	1091 aa		5.74	□□□□□ -1.49
MAK11	YKL021C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
MAK11	YKL021C	CDC48	P25694	835 aa	Known RBP	5.73	□□□□□ -1.49
MAK11	YKL021C	BET3	P36149	193 aa		5.73	□□□□□ -1.49
MAK11	YKL021C	RSP5	P39940	809 aa	Known RBP	5.73	□□□□□ -1.49
MAK11	YKL021C	RTA1	P53047	317 aa		5.73	□□□□□ -1.49
MAK11	YKL021C	LCD1	Q04377	747 aa		5.73	□□□□□ -1.49
MAK11	YKL021C	RXT3	Q07458	294 aa		5.73	□□□□□ -1.49
MAK11	YKL021C	ACK1	Q07622	623 aa	Predicted RBP	5.73	□□□□□ -1.49
MAK11	YKL021C	PPM2	Q08282	695 aa		5.73	□□□□□ -1.49
MAK11	YKL021C	SPE1	P08432	466 aa		5.72	□□□□□ -1.49
MAK11	YKL021C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
MAK11	YKL021C	RPC82	P32349	654 aa		5.72	□□□□□ -1.49
MAK11	YKL021C	DOM34	P33309	386 aa		5.72	□□□□□ -1.49
MAK11	YKL021C	PET10	P36139	283 aa		5.72	□□□□□ -1.49
MAK11	YKL021C	PBP1	P53297	722 aa	Known RBP	5.72	□□□□□ -1.49
MAK11	YKL021C	YPR196W	Q06595	470 aa		5.72	□□□□□ -1.49
MAK11	YKL021C	HSF1	P10961	833 aa		5.71	□□□□□ -1.5
MAK11	YKL021C	POA1	P38218	177 aa		5.71	□□□□□ -1.5
MAK11	YKL021C	TAF1	P46677	1066 aa		5.71	□□□□□ -1.5
MAK11	YKL021C	CDC11	P32458	415 aa		5.7	□□□□□ -1.5
MAK11	YKL021C	MET12	P46151	657 aa		5.7	□□□□□ -1.5
MAK11	YKL021C	ESC8	Q08119	714 aa		5.7	□□□□□ -1.5
MAK11	YKL021C	CAN1	P04817	590 aa		5.69	□□□□□ -1.5
MAK11	YKL021C	CCM1	P48237	864 aa	Predicted RBP	5.69	□□□□□ -1.5
MAK11	YKL021C	WHI4	Q07655	649 aa	Known RBP	5.69	□□□□□ -1.5
MAK11	YKL021C	NOT3	P06102	836 aa	Known RBP	5.68	□□□□□ -1.5
MAK11	YKL021C	REC104	P33323	182 aa		5.68	□□□□□ -1.5
MAK11	YKL021C	LST4	P34239	828 aa		5.68	□□□□□ -1.5
MAK11	YKL021C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
MAK11	YKL021C	RAI1	P53063	387 aa	Known RBP	5.68	□□□□□ -1.5
MAK11	YKL021C	CLU1	Q03690	1277 aa	Known RBP	5.68	□□□□□ -1.5
MAK11	YKL021C	YLR224W	Q05947	369 aa		5.68	□□□□□ -1.5
MAK11	YKL021C	YDL124W	Q07551	312 aa	Known RBP	5.68	□□□□□ -1.5
MAK11	YKL021C	GAL11	P19659	1081 aa		5.67	□□□□□ -1.5
MAK11	YKL021C	SRP40	P32583	406 aa	Predicted RBP	5.67	□□□□□ -1.5
MAK11	YKL021C	YKL091C	P33324	310 aa	Known RBP	5.67	□□□□□ -1.5
MAK11	YKL021C	HUL4	P40985	892 aa		5.67	□□□□□ -1.5
MAK11	YKL021C	UBP6	P43593	499 aa	Known RBP	5.67	□□□□□ -1.5
MAK11	YKL021C	RPN4	Q03465	531 aa		5.67	□□□□□ -1.5
MAK11	YKL021C	TMA10	Q06177	86 aa		5.67	□□□□□ -1.5
MAK11	YKL021C	NOP12	Q08208	459 aa	Known RBP	5.67	□□□□□ -1.5
MAK11	YKL021C	ENV7	Q12003	364 aa		5.67	□□□□□ -1.5
MAK11	YKL021C	YLR358C	O13565	187 aa		5.66	□□□□□ -1.5
MAK11	YKL021C	HIS5	P07172	385 aa		5.66	□□□□□ -1.5
MAK11	YKL021C	CHA4	P43634	648 aa		5.66	□□□□□ -1.5
MAK11	YKL021C	TOM70	P07213	617 aa	Known RBP	5.65	□□□□□ -1.5
MAK11	YKL021C	ERR1	P0CX10	437 aa		5.65	□□□□□ -1.5
MAK11	YKL021C	ERR2	P0CX11	437 aa		5.65	□□□□□ -1.5
MAK11	YKL021C	CTS1	P29029	562 aa		5.65	□□□□□ -1.5
MAK11	YKL021C	STE13	P33894	931 aa		5.65	□□□□□ -1.5
MAK11	YKL021C	BUD6	P41697	788 aa		5.65	□□□□□ -1.5
MAK11	YKL021C	PSP2	P50109	593 aa	Known RBP	5.65	□□□□□ -1.5
MAK11	YKL021C	YTA7	P40340	1379 aa		5.65	□□□□□ -1.5
MAK11	YKL021C	YCR015C	P25616	317 aa		5.65	□□□□□ -1.51
MAK11	YKL021C	TIM23	P32897	222 aa		5.65	□□□□□ -1.51
MAK11	YKL021C	GGA2	P38817	585 aa	Known RBP	5.65	□□□□□ -1.51
MAK11	YKL021C	URM1	P40554	99 aa	Predicted RBP	5.65	□□□□□ -1.51
MAK11	YKL021C	SSL1	Q04673	461 aa	Predicted RBP	5.65	□□□□□ -1.51
MAK11	YKL021C	RPD3	P32561	433 aa		5.64	□□□□□ -1.51
MAK11	YKL021C	PLB1	P39105	664 aa		5.64	□□□□□ -1.51
MAK11	YKL021C	GIP4	P39732	760 aa		5.64	□□□□□ -1.51
MAK11	YKL021C	GYP8	P43570	497 aa		5.64	□□□□□ -1.51
MAK11	YKL021C	YOR131C	Q12486	218 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms